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Vrije Universität Amsterdam, Niederlande, Amsterdam, Niederlande (2011)
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PLoS ONE 6, e19791 (2011)
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Photoprotection in plants involves a change in Lutein 1 binding domain in the major light-harvesting complex of photosystem II.
Journal of Biological Chemistry 286, 27247-27254 (2011)
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Jakobs, S., S. Stoldt and D. Neumann:
Light microscopic analysis of mitochondrial heterogeneity in cell populations and within single cells.
In: High resolution microbial single cell analytics, (Eds.) Mueller, S.; Bley, T., Advances in biochemical engineering-biotechnology 124. Springer, Berlin (2011) 1-19
Janowicz, A., M. Michalak and J. Krebs:
Stress induced subcellular distribution of ALG-2, RBM22 and hS1u7.
Biochimica et Biophysica Acta-Molecular Cell Research 1813, 1045-1049 (2011)
Jaspers, M. H. J.:
Identification and characterization of genes involved in tracheal liquid clearance of Drosophila melanogaster.
Universität Osnabrück, Osnabrück (2011)
Jelen, S., S. Wacker, C. Aponte-Santamaria, M. Skott, A. Rojek, U. Johanson, P. Kjellbom, S. Nielsen, B. L. de Groot and M. Ruetzler:
Aquaporin-9 protein is the primary route of hepatocyte glycerol uptake for glycerol gluconeogenesis in mice.
Journal of Biological Chemistry 286, 44319-44325 (2011)
Jeltsch, A. and W. Fischle:
Molecular epigenetics: Connecting human biology and disease with little marks.
ChemBioChem 12, 183-184 (2011)
Jorgacevski, J., M. Potokar, S. Grilc, M. Kreft, W. Liu, J. W. Barclay, J. Bückers, R. Medda, S. W. Hell, V. Parpura, R. D. Burgoyne and R. Zorec:
Munc18-1 tuning of vesicle merger and fusion pore properties.
Journal of Neuroscience 31, 9055-9066 (2011)
Jovin, T. M., M. J. Roberti, S. A. Diaz, G. O. Menendez, E. A. Jares-Erijman, I. Ziomkievicz and D. J. Arndt-Jovin: FRET approaches to signal transduction: from QD biosensors to live-cell EGFR signaling. In: European Biophysics Journal, 40, Supplement 1, (2011) 150
Julian, P., P. Milon, X. Agirrezabala, G. Lasso, D. Gil, M. V. Rodnina and M. Valle:
The cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli.
Velocity-dependent mechanical unfolding of bacteriorhodopsin is governed by a dynamic interaction network.
Biophysical Journal 100, 1109-1119 (2011)
Karyagina, I., S. Becker, K. Giller, D. Riedel, T. M. Jovin, C. Griesinger and M. Bennati:
Electron paramagnetic resonance spectroscopy measures the distance between the external β-strands of folded α-synuclein in amyloid fibrils.
Biophysical Journal 101, L1-L3 (2011)
Keller, O., M. Kollmar, M. Stanke and S. Waack:
A novel hybrid gene prediction method employing protein multiple sequence alignments.
Bioinformatics 27, 757-763 (2011)
Khan, S., R. Michel, J. M. Dieterich, R. A. Mata, H. W. Roesky, J. P. Demers, A. Lange and D. Stalke:
Preparation of RSn(I)-Sn(I)R with two unsymmetrically coordinated Sn(I) atoms and subsequent gentle activation of P(4).
Journal of the American Chemical Society 133, 17889-17894 (2011)
King, I., L. T. Y. Tsai, R. Pflanz, A. Voigt, S. Lee, H. Jäckle, B. Lu and U. Heberlein:
Drosophila tao controls mushroom body development and ethanol-stimulated behavior through par-1.
Journal of Neuroscience 31, 1139-1148 (2011)
Kleine-Vehn, J., K. Wabnik, A. Martiniere, L. Langowski, K. Willig, S. Naramoto, J. Leitner, H. Tanaka, S. Jakobs, S. Robert, C. Luschnig, W. Govaerts, S. W. Hell, J. Runions and J. Friml:
Recycling, clustering, and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane.
Molecular Systems Biology 7, 540 (2011)
Knoch, F.:
Steering excited state dynamics of biological chromophores by external electric fields.
Kramer, K., P. Hummel, H. H. Hsiao, X. Luo, M. Wahl and H. Urlaub:
Mass-spectrometric analysis of proteins cross-linked to 4-thio-uracil- and 5-bromo-uracil-substituted RNA.
International Journal of Mass Spectrometry 304, 184-194 (2011)
Krebs, J., J. Groenendyk and M. Michalak:
Ca2+-signaling, alternative splicing and endoplasmic reticulum stress responses.
Neurochemical Research 36, 1198-1211 (2011)
Krebs, J.:
Calcium waves in Warszawa.
Biochimica et Biophysica Acta-Molecular Cell Research 1813, 909-912 (2011)
Kretzschmar, H., J. Wagner, S. Ryazanaov, A. Leonov, J. Levin, S. Shi, C. Prix, M. Groschup, C. Griesinger and A. Giese: Causal therapy of prion and Parkinson's disease with novel inhibitors of protein aggregation. In: Journal of Neuropathology and Experimental Neurology, 70, 6, (2011) 505
Krumova, P., E. Meulmeester, M. Garrido, M. Tirard, H. H. Hsiao, G. Bossis, H. Urlaub, M. Zweckstetter, S. Kuegler, F. Melchior, M. Baehr and J. H. Weishaupt:
Sumoylation inhibits alpha-synuclein aggregation and toxicity.
Journal of Cell Biology 194, 49-60 (2011)
Kucherenko, M. M., A. K. Marrone, V. M. Rishko, H. D. Magliarelli and H. R. Shcherbata:
Stress and muscular dystrophy: A genetic screen for Dystroglycan and Dystrophin interactors in Drosophila identifies cellular stress response components.
Developmental Biology 352, 228-242 (2011)
Kuehnel, K. and D. Diezmann:
Crystal structure of the autochaperone region from the Shigella flexneri autotransporter IcsA.
Journal of Bacteriology 193, 2042-2045 (2011)
Kuhlenkoetter, S., W. Wintermeyer and M. V. Rodnina:
Different substrate-dependent transition states in the active site of the ribosome.
Nature 476, 351-354 (2011)
Kukat, C., C. A. Wurm, H. Spahr, M. Falkenberg, N. G. Larsson and S. Jakobs:
Super-resolution microscopy reveals that mammalian mitochondrial nucleoids have a uniform size and frequently contain a single copy of mtDNA.
Proceedings of the National Academy of Sciences of the United States of America 108, 13534-13539 (2011)
Kumar, S., N. Rezaei-Ghaleh, D. Terwel, D. R. Thal, M. Richard, M. Hoch, J. M. McDonald, U. Wuellner, K. Glebov, M. T. Heneka, D. M. Walsh, M. Zweckstetter and J. Walter:
Extracellular phosphorylation of the amyloid beta-peptide promotes formation of toxic aggregates during the pathogenesis of Alzheimer's disease.
EMBO Journal 30, 2255-2265 (2011)
Kutzner, C., H. Grubmüller, B. L. de Groot and U. Zachariae:
Computational electrophysiology: The molecular dynamics of ion channel permeation and selectivity in atomistic detail.
Biophysical Journal 101, 809-817 (2011)
Kutzner, C., J. Czub and H. Grubmüller:
Keep it flexible: Driving macromolecular rotary motions in atomistic simulations with GROMACS.
Journal of Chemical Theory and Computation 7, 1381-1393 (2011)
Kühnlein, R. P.:
The contribution of the Drosophila model to lipid droplet research.
Progress in Lipid Research 50, 348-356 (2011)
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Lamberto, C. R., V. Torres-Monserrat, C. W. Bertoncini, X. Salvatella, M. Zweckstetter, C. Griesinger and C. O. Fernandez:
Toward the discovery of effective polycyclic inhibitors of alpha-Synuclein amyloid assembly.
Journal of Biological Chemistry 286, 32036-32044 (2011)
Landgraf, D.:
Metabolic synchronization of the liver circadian clock.
LaRue, J. L., T. Schäfer, D. Matsisev, L. Velarde, N. H. Nahler, D. J. Auerbach and A. M. Wodtke:
Electron kinetic energies from vibrationally promoted surface exoemission: Evidence for a vibrational autodetachment mechanism.
Journal of Physical Chemistry A 115, 14306-14314 (2011)
LaRue, J., T. Schäfer, D. Matsiev, L. Velarde, N. H. Nahler, D. J. Auerbach and A. M. Wodtke:
Vibrationally promoted electron emission at a metal surface: electron kinetic energy distributions.
Physical Chemistry Chemical Physics 13, 97-99 (2011)
Lee, B. B.:
Visual pathways and psychophysical channels in the primate.
Journal of Physiology 589, 41-47 (2011)
Lee, B. B., H. Sun and A. Valberg:
Segregation of chromatic and luminance signals using a novel grating stimulus.
Journal of Physiology 589, 59-73 (2011)
Lee, J., R. Chunara, W. Shen, K. Payer, K. Babcock, T. P. Burg and S. R. Manalis:
Suspended microchannel resonators with piezoresistive sensors.
Lab on a Chip 11, 645-651 (2011)
Leonov, H., P. Astrahan, M. Krugliak and I. T. Arkin:
How do aminoadamantanes block the influenza M2 channel, and how does resistance develop?
Journal of the American Chemical Society 133, 9903-9911 (2011)
Levin, J., J. Wagner, S. Ryazanov, A. Leonov, S. Shi, F. Schmidt, C. Prix, U. Bertsch, G. Mitteregger-Kretzschmar, M. Geissen, T. Hischberger, P. Tavan, J. Pilger, M. Zweckstetter, T. Frank, M. Baehr, J. Weishaupt, M. Uhr, H. Urlaub, U. Teichmann, K. Boetzel, M. Groschup, H. A. Kretzschmar, C. Griesinger and A. Giese: Causal therapy of Parkinson's disease with anle138b, a novel protein aggregation inhibitor. In: Movement Disorders, 26, Supplement 2, (2011) S21
Liao, P. N., S. Pillai, D. Gust, T. Moore, A. Moore and P. J. Walla:
Two-photon study on the electronic interactions between the first excited singlet states in carotenoid-tetrapyrrole dyads.
Journal of Physical Chemistry A 115, 4082-4091 (2011)
Ligges, M., I. Rajkovic, C. Streubuhr, T. Brazda, P. Zhou, O. Posth, C. Hassel, G. Dumpich and D. von der Linde:
Transient (000)-order attenuation effects in ultrafast transmission electron diffraction.
Journal of Applied Physics 109, 063519 (2011)
Lin, K. H., S. Oleskevich and H. Taschenberger:
Presynaptic Ca2+ influx and vesicle exocytosis at the mouse endbulb of Held: A comparison of two auditory nerve terminals.
Journal of Physiology 589, 4301-4320 (2011)
Lin, K. H.:
Functional properties and Ca2-dependent feedback modulation of voltage-gated Ca2 channels in glutamatergic nerve terminals of the mammalian auditory brainstem.
Liu, K. S. Y., M. Siebert, S. Mertel, E. Knoche, S. Wegener, C. Wichmann, T. Matkovic, K. Muhammad, H. Depner, C. Mettke, J. Bückers, S. W. Hell, M. Müller, G. W. Davis, D. Schmitz and S. J. Sigrist:
RIM-binding protein, a central part of the active zone, is essential for neurotransmitter release.
Science 334, 1565-1569 (2011)
Liu, S., H. Ghalei, R. Lührmann and M. Wahl:
Structural basis for the dual U4 and U4atac snRNA-binding specificity of spliceosomal protein hPrp31.
RNA 17, 1655-1663 (2011)
Lize, M., A. Klimke and M. Dobbelstein:
MicroRNA-449 in cell fate determination.
Cell Cycle 10, 2874-2882 (2011)
Long, D., D. W. Li, K. F. A. Walter, C. Griesinger and R. Brueschweiler:
Toward a predictive understanding of slow methyl group dynamics in proteins.
Biophysical Journal 101, 910-915 (2011)
Lopez, M., H. Vu, C. K. Wang, M. G. Wolf, G. Groenhof, A. Innocenti, C. T. Supuran and S. A. Poulsen:
Promiscuity of carbonic anhydrase II. Unexpected ester hydrolysis of carbohydrate-based sulfamate inhibitors.
Journal of the American Chemical Society 133, 18452-18462 (2011)
Loquet, A., G. Lv, K. Giller, S. Becker and A. Lange:
13C spin dilution for simplified and complete solid-state NMR resonance assignment of insoluble biological assemblies.
Journal of the American Chemical Society 133, 4722-4725 (2011)
Luo, L., M. Hannemann, S. Koenig, J. Hegermann, M. Ailion, M. K. Cho, N. Sasidharan, M. Zweckstetter, S. A. Rensing and S. Eimer:
The Caenorhabditis elegans GARP complex contains the conserved Vps51 subunit and is required to maintain lysosomal morphology.
Molecular Biology of the Cell 22, 2564-2578 (2011)
Lupo, D., C. Vollmer, M. Deckers, D. U. Mick, I. Tews, I. Sinning and P. Rehling:
Mdm38 is a 14-3-3-like receptor and associates with the protein synthesis machinery at the inner mitochondrial membrane.
Traffic 12, 1457-1466 (2011)
Lygina, A. S., K. Meyenberg, R. Jahn and U. Diederichsen:
Transmembrane domain peptide/peptide nucleic acid hybrid as a model of a SNARE protein in vesicle fusion.
Marrone, A. K., M. M. Kucherenko, V. M. Rishko and H. R. Shcherbata:
New Dystrophin/Dystroglycan interactors control neuron behavior in Drosophila eye.
BMC Neuroscience 12, 93 (2011)
Marrone, A. K., M. M. Kucherenko, R. Wiek, M. C. Göpfert and H. R. Shcherbata:
Hyperthermic seizures and aberrant cellular homeostasis in Drosophila dystrophic muscles.
Nature Scientific Reports 1, 47 (2011)
Marsh, D.:
Water adsorption isotherms of lipids.
Biophysical Journal 101, 2704-2712 (2011)
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Marsh, D.:
Pivotal surfaces in inverse hexagonal and cubic phases of phospholipids and glycolipids.
Chemistry and Physics of Lipids 164, 177-183 (2011)
Martinez Hernandez, A.:
New genetic mouse models for neurodegenerative diseases: Contribution of noradrenaline to Alzheimer’s disease pathogenesis and creation of a new genetic model for Parkinson’s disease.
Distortion of tRNA upon near-cognate codon recognition on the ribosome.
Journal of Biological Chemistry 286, 8158-8164 (2011)
Mosch, K., H. Franz, S. Soeroes, P. B. Singh and W. Fischle:
HP1 recruits activity-dependent neuroprotective protein to H3K9me3 marked pericentromeric heterochromatin for silencing of major satellite repeats.
PLoS ONE 6, e15894 (2011)
Mothet, J. P., T. Shi, J. Puyal, J. Klingauf, J. Sweedler, R. Jahn and M. Martineau: Vesicular transport of D-serine in astrocytes. In: GLIA, 59, Supplement 1, (2011) S34-S35
Mueller, V., C. Ringemann, A. Honigmann, G. Schwarzmann, R. Medda, M. Leutenegger, S. Polyakova, V. N. Belov, S. W. Hell and C. Eggeling:
STED nanoscopy reveals molecular details of cholesterol- and cytoskeleton-modulated lipid interactions in living cells.
Biophysical Journal 101, 1651-1660 (2011)
Mueller, M., R. G. Heym, A. Mayer, K. Kramer, M. Schmid, P. Cramer, H. Urlaub, R. P. Jansen and D. Niessing:
A cytoplasmic complex mediates specific mRNA recognition and localization in yeast.
PLoS Biology 9, e1000611 (2011)
Muetze, J., T. Ohrt and P. Schwille:
Fluorescence correlation spectroscopy in vivo.
Laser and Photonics Reviews 5, 52-67 (2011)
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Quantitative aspects of calcium fluorimetry.
In: Imaging: a laboratory manual, (Ed.) Rafael, Y., Cold Spring Harbor Laboratory Press, New York (2011) 417-426
Neumann, K., T. Oellerich, I. Heine, H. Urlaub and M. Engelke:
Fc gamma receptor IIb modulates the molecular Grb2 interaction network in activated B cells.
Cellular Signalling 23, 893-900 (2011)
Nikolov, M., A. Stützer, K. Mosch, A. Krasauskas, S. Sörös, H. Stark, H. Urlaub and W. Fischle:
Chromatin affinity purification and quantitative mass spectrometry defining the interactome of histone modification patterns.
Molecular and Cellular Proteomics 10, DOI: 10.1074/mcp.M110.005371 (2011)
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Odenwälder, P.:
Elucidation of the function of proteins at the second catalytic step of the pre-mRNA splicing reaction.
Oellerich, T., V. Bremes, K. Neumann, H. Bohnenberger, K. Dittmann, H. H. Hsiao, M. Engelke, T. Schnyder, F. D. Batista, H. Urlaub and J. Wienands:
The B-cell antigen receptor signals through a preformed transducer module of SLP65 and CIN85.
EMBO Journal 30, 3620-3634 (2011)
Ohrt, T., W. Staroske, J. Muetze, K. Crell, M. Landthaler and P. Schwille:
Fluorescence cross-correlation spectroscopy reveals mechanistic insights into the effect of 2 '-O-methyl modified siRNAs in living cells.
Biophysical Journal 100, 2981-2990 (2011)
Okumura, Y., R. Schmidt, I. Raschke, M. Hintze, S. Takeoka, A. Egner and T. Lang:
A few immobilized thrombins are sufficient for platelet spreading.
Biophysical Journal 100, 1855-1863 (2011)
Ons, S., M. Sterkel, L. Diambra, H. Urlaub and R. Rivera-Pomar:
Neuropeptide precursor gene discovery in the Chagas disease vector Rhodnius prolixus.
Insect Molecular Biology 20, 29-44 (2011)
Oppikofer, M., S. Kueng, F. Martino, S. Soeroes, S. M. Hancock, J. W. Chin, W. Fischle and S. M. Gasser:
A dual role of H4K16 acetylation in the establishment of yeast silent chromatin.
EMBO Journal 30, 2610-2621 (2011)
Orcellet, M. L. and C. O. Fernandez:
Structures behind the amyloid aggregation of alpha-synuclein: an NMR based approach.
Current Protein and Peptide Science 12, 188-205 (2011)
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Tctex-1, a novel interaction partner of Rab3D, is required for osteoclastic bone resorption.
Molecular and Cellular Biology 31, 1551-1564 (2011)
Pearson, M. D. and H. F. Noller:
The draft genome of Planococcus donghaensis MPA1U2 reveals nonsporulation pathways controlled by a conserved Spo0A regulon.
Journal of Bacteriology 193, 6106 (2011)
Perez-Balado, C., H. Sun, C. Griesinger, A. R. de Lera and A. Navarro-Vazquez:
Residual dipolar coupling enhanced NMR spectroscopy and chiroptics: A powerful combination for the complete elucidation of symmetrical small molecules.
Chemistry-A European Journal 17, 11983-11986 (2011)
Persson, F., P. Bingen, T. Staudt, J. Engelhardt, J. O. Tegenfeldt and S. W. Hell:
Fluoreszenznanoskopie einzelner DNA-Moleküle mit Fluoreszenzverhinderung durch stimulierte Emission (STED).
Angewandte Chemie 123, 5696-5698 (2011)
Persson, F., P. Bingen, T. Staudt, J. Engelhardt, J. O. Tegenfeldt and S. W. Hell:
Fluorescence nanoscopy of single DNA molecules by using stimulated emission depletion (STED).
Pezzagna, S., D. Rogalla, D. Wildanger, J. Meijer and A. Zaitsev:
Creation and nature of optical centres in diamond for single-photon emission—overview and critical remarks.
New Journal of Physics 13, 035024 (2011)
Pidoux, G., O. Witczak, E. Jarnaess, L. Myrvold, H. Urlaub, A. J. Stokka, T. Kuntziger and K. Tasken:
Optic atrophy 1 is an A-kinase anchoring protein on lipid droplets that mediates adrenergic control of lipolysis.
EMBO Journal 30, 4371-4386 (2011)
Pillmann, H., K. Hatje, F. Odronitz, B. Hammesfahr and M. Kollmar:
Predicting mutually exclusive spliced exons based on exon length, splice site and reading frame conservation, and exon sequence homology.
BMC Bioinformatics 12, 270 (2011)
Polyakova, S. M., V. N. Belov, M. L. Bossi and S. W. Hell:
Synthesis of photochromic compounds for aqueous solutions and focusable light.
European Journal of Organic Chemistry 2011, 3301-3312 (2011)
Popow, J., M. Englert, S. Weitzer, A. Schleiffer, B. Mierzwa, K. Mechtler, S. Trowitzsch, C. L. Will, R. Lührmann, D. Soell and J. Martinez:
HSPC117 is the essential subunit of a human tRNA splicing ligase complex.
Science 331, 760-764 (2011)
Pulido, I. R., R. Jahn and V. Gerke:
VAMP3 is associated with endothelial Weibel-Palade bodies and participates in their Ca2+-dependent exocytosis.
Biochimica et Biophysica Acta-Molecular Cell Research 1813, 1038-1044 (2011)
Pörschke, D.:
Electric birefringence at small angles from crossed position: Enhanced sensitivity and special effects.
Journal of Physical Chemistry B 115, 4177-4183 (2011)
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Quinto-Hernandez, A., Y. Y. Lee, T. P. Huang, W. C. Pan, R. A. Mata and A. M. Wodtke:
Photoionization of CH3N3 produces 3B2 N3-: A theoretical and experimental study of the ion-pair channel.
Journal of Physical Chemistry Letters 2, 2311-2315 (2011)
Quinto-Hernandez, A., A. M. Wodtke, C. J. Bennett, Y. S. Kim and R. I. Kaiser:
On the interaction of methyl azide (CH3N3) ices with ionizing radiation: Formation of methanimine (CH2NH), hydrogen cyanide (HCN), and hydrogen isocyanide (HNC).
Journal of Physical Chemistry A 115, 250-264 (2011)
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Rabe, T.:
Funktionelle Analyse des Transkriptionsfaktors Uncx4.1 im murinen Mittelhirn.
Rahinov, I., R. Cooper, D. Matsiev, C. Bartels, D. J. Auerbach and A. M. Wodtke:
Quantifying the breakdown of the Born-Oppenheimer approximation in surface chemistry.
Physical Chemistry Chemical Physics 13, 12680-12692 (2011)
Rajkovic, I., S. Grübel, W. Quevedo and S. Techert:
Ultrafast pump/probe diffraction and spectroscopy experiments with FEL radiation: setup development from the soft to the hard x-rays with the aim of studying chemical processes.
Proceedings of SPIE 8078, 80780A1-80780A7 (2011)
Rankin, B. R., G. Moneron, C. A. Wurm, J. C. Nelson, A. Walter, D. Schwarzer, J. Schroeder, D. A. Colon-Ramos and S. W. Hell:
Nanoscopy in a living multicellular organism expressing GFP.
Biophysical Journal 100, L63-L65 (2011)
Redemann, S., S. Schloissnig, S. Ernst, A. Pozniakowsky, S. Ayloo, A. A. Hyman and H. Bringmann:
Codon adaptation-based control of protein expression in C. elegans.
Reinhold, R., B. Bareth, M. Balleininger, M. Wissel, P. Rehling and D. U. Mick:
Mimicking a SURF1 allele reveals uncoupling of cytochrome c oxidase assembly from translational regulation in yeast.
Human Molecular Genetics 20, 2379-2393 (2011)
Reisinger, E., C. Bresee, J. Neef, R. Nair, K. Reuter, A. Bulankina, R. Nouvian, M. Koch, J. Bückers, L. Kastrup, I. Roux, C. Petit, S. W. Hell, N. Brose, J. Rhee, S. Kuegler, J. V. Brigande and T. Moser:
Probing the functional equivalence of otoferlin and synaptotagmin 1 in exocytosis.
Journal of Neuroscience 31, 4886-4895 (2011)
Rezaei-Ghaleh, N., K. Giller, S. Becker and M. Zweckstetter:
Effect of zinc binding on beta-amyloid structure and dynamics: Implications for a beta aggregation.
Biophysical Journal 101, 1202-1211 (2011)
Rezaei-Ghaley, N., E. Andreetto, L. M. Yan, A. Kapurniotu and M. Zweckstetter:
Interaction between amyloid beta peptide and an aggregation blocker peptide mimicking islet amyloid polypeptide.
PLoS ONE 6, e20289 (2011)
Risselada, H. J., C. Kutzner and H. Grubmüller:
Caught in the act: Visualization of SNARE-mediated fusion events in molecular detail.
ChemBioChem 12, 1049-1055 (2011)
Risselada, H. J., S. J. Marrink and M. Mueller:
Curvature-dependent elastic properties of liquid-ordered domains result in inverted domain sorting on uniaxially compressed vesicles.
Physical Review Letters 106, 148102 (2011)
Roberti, M. J., T. M. Jovin and E. Jares-Erijman:
Confocal fluorescence anisotropy and FRAP imaging of alpha-synuclein amyloid aggregates in living cells.
PLoS ONE 6, e23338 (2011)
Roberti, M. J., L. Giordano, T. M. Jovin and E. A. Jares-Erijman:
FRET imaging by kt/kf.
ChemPhysChem 12, 563-566 (2011)
Rodnina, M. V. and W. Wintermeyer:
The ribosome as a molecular machine: The mechanism of tRNA–mRNA movement in translocation.
Biochemical Society Transactions 39, 658-662 (2011)
Rodnina, M. V.:
Mechanisms of decoding and peptide bond formation.
In: Ribosomes, Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien/New York (2011) 199-212
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Ribosomes Structure, Function, and Dynamics.
Springer Verlag, Wien/New York (2011) 442p.
Roux, B., S. Berneche, B. Egwolf, B. Lev, S. Y. Noskov, C. N. Rowley and H. Yu:
Ion selectivity in channels and transporters.
Journal of General Physiology 137, 415-426 (2011)
Rozov, A.:
Investigation of the structure and function of the spliceosomal 220K/Prp8 protein, GGNB.
Schmitges, F. W., A. B. Prusty, M. Faty, A. Stützer, G. M. Lingaraju, J. Aiwazian, R. Sack, D. Hess, L. Li, S. Zhou, R. D. Bunker, U. Wirth, T. Bouwmeester, A. Bauer, N. Ly-Hartig, K. Zhao, H. Chan, J. Gu, H. Gut, W. Fischle, J. Mueller and N. H. Thomae:
Histone methylation by PRC2 is inhibited by active chromatin marks.
Molecular Cell 42, 330-341 (2011)
Schneider, R., M. C. Schuhmacher, H. Mueller, D. Nand, V. Klaukien, H. Heise, D. Riedel, G. Wolf, E. Behrmann, S. Raunser, R. Seidel, M. Engelhard and M. Baldus:
Structural characterization of polyglutamine fibrils by solid-state NMR spectroscopy.
Journal of Molecular Biology 412, 121-136 (2011)
Schnyder, T., A. Castello, C. Feest, N. E. Harwood, T. Oellerich, H. Urlaub, M. Engelke, J. Wienands, A. Bruckbauer and F. D. Batista:
B cell receptor-mediated antigen gathering requires ubiquitin ligase Cbl and adaptors Grb2 and Dok-3 to recruit dynein to the signaling microcluster.
Immunity 34, 905-918 (2011)
Schrof, S., T. Staudt, E. Rittweger, N. Wittenmayer, T. Dresbach, J. Engelhardt and S. W. Hell:
STED nanoscopy with mass-produced laser diodes.
Optics Express 19, 8066-8072 (2011)
Schulz, C., O. Lytovchenko, J. Melin, A. Chacinska, B. Guiard, P. Neumann, R. Ficner, O. Jahn, B. Schmidt and P. Rehling:
Tim50's presequence receptor domain is essential for signal driven transport across the TIM23 complex.
Journal of Cell Biology 195, 643-656 (2011)
Schwarz, J., I. L. Lewandrowski and H. Bringmann:
Reduced activity of a sensory neuron during a sleep-like state in Caenorhabditis elegans.
Current Biology 21, R983-R984 (2011)
Schweisfurth, M. A., R. Schweizer and J. Frahm:
Functional MRI indicates consistent intra-digit topographic maps in the little but not the index finger within the human primary somatosensory cortex.
NeuroImage 56, 2138-2143 (2011)
Seeliger, D., F. P. Buelens, M. Götte, B. L. de Groot and H. Grubmüller:
Towards computional specificity screening of DNA-binding proteins.
Nucleic Acids Research 39, 8281-8290 (2011)
Sela, M., Y. Bogin, D. Beach, T. Oellerich, J. Lehne, J. E. Smith-Garvin, M. Okumura, E. Starosvetsky, R. Kosoff, E. Libman, G. Koretzky, T. Kambayashi, H. Urlaub, J. Wienands, J. Chernoff and D. Yablonski:
Sequential phosphorylation of SLP-76 at tyrosine 173 is required for activation of T and mast cells.
EMBO Journal 30, 3160-3172 (2011)
Sen, S. S., S. Khan, H. W. Roesky, D. Kratzert, K. Meindl, J. Henn, D. Stalke, J. P. Demers and A. Lange:
Zwitterionic Si-C-Si-P and Si-P-Si-P four-membered rings with two-coordinate phosphorus atoms.
Sergiev, P. V., A. Y. Golovina, I. V. Prokhorova, O. V. Sergeeva, I. A. Osterman, M. V. Nesterchuk, D. E. Burakovskiy, A. A. Bogdanov and O. A. Dontsova:
Modifications of ribosomal RNA: From enzymes to function.
In: Ribosomes Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien (2011) 97-110
Shchedrina, V. A., H. Kabil, G. Vorbrüggen, B. C. Lee, A. A. Turanov, M. Hirosawa-Takamori, H. Y. Kim, L. G. Harshman, D. L. Hatfield and V. N. Gladyshev:
Analyses of fruit flies that do not express selenoproteins or express the mouse selenoprotein, methionine sulfoxide reductase B1, reveal a role of selenoproteins in stress resistance.
Journal of Biological Chemistry 286, 29449-29461 (2011)
Shuman, N. S., T. M. Miller, A. A. Viggiano and J. Troe:
Electron attachment to POCl(3). II. Dependence of the attachment rate coefficients on gas and electron temperature.
International Journal of Mass Spectrometry 306, 123-128 (2011)
Shuman, N. S., T. M. Miller, J. F. Friedman, A. A. Viggiano, A. I. Maergoiz and J. Troe:
Pressure and temperature dependence of dissociative and non-dissociative electron attachment to CF3: Experiments and kinetic modeling.
Journal of Chemical Physics 135, 054306 (2011)
Shuman, N. S., T. M. Miller, A. A. Viggiano and J. Troe:
Electron attachment to POCl3. III. Measurement and kinetic modeling of branching fractions.
Journal of Chemical Physics 134, 094310 (2011)
Shvadchak, V. V., D. A. Yushchenko, R. Pievo and T. M. Jovin:
The mode of α-synuclein binding to membranes depends on lipid composition and lipid to protein ratio.
FEBS Letters 585, 3513-3519 (2011)
Shvadchak, V. V., L. J. Falomir-Lockhart, D. A. Yushchenko and T. M. Jovin:
Specificity and kinetics of α-synuclein binding to model membranes determined with fluorescent excited state intramolecular proton transfer (ESIPT) probe.
Journal of Biological Chemistry 286, 13023-13032 (2011)
Sinha, R., S. Ahmed, R. Jahn and J. Klingauf:
Two synaptobrevin molecules are sufficient for vesicle fusion in central nervous system synapses.
Proceedings of the National Academy of Sciences of the United States of America 108, 14318-14323 (2011)
Sinha, R.:
Optical analysis of synaptic vesicle protein molecules during exo- and endocytosis using pH-switchable fluorescent probes.
Testing the applicability of Nernst-Planck theory in ion channels: Comparisons with Brownian dynamics simulations.
Plosone 6, e21204 (2011)
Staudt, T., A. Engler, E. Rittweger, B. Harke, J. Engelhardt and S. W. Hell:
Far-field optical nanoscopy with reduced number of state transition cycles.
Optics Express 19, 5644-5657 (2011)
Sterkel, M., H. Urlaub, R. Rivera-Pomar and S. Ons:
Functional proteomics of neuropeptidome dynamics during the feeding process of Rhodnius prolixus.
Journal of Proteome Research 10, 3363-3371 (2011)
Stojic, L., Z. Jasencakova, C. Prezioso, A. Stützer, B. Bodega, D. Pasini, R. Klingberg, C. Mozzetta, R. Margueron, P. L. Puri, D. Schwarzer, K. Helin, W. Fischle and V. Orlando:
Chromatin regulated interchange between polycomb repressive complex 2 (PRC2)-Ezh2 and PRC2-Ezh1 complexes controls myogenin activation in skeletal muscle cells.
Epigenetics and Chromatin 4, 16 (2011)
Stoller, S., G. Sicoli, T. Y. Baranova, M. Bennati and U. Diederichsen:
TOPP: A novel nitroxide-labeled amino acid for EPR distance measurements.
Angewandte Chemie International Edition 50, 9743-9746 (2011)
Sumpf, T., M. Uecker, S. Boretius and J. Frahm:
Model-based nonlinear inverse reconstruction for T2 mapping using highly undersampled spin-echo MRI.
Journal of Magnetic Resonance Imaging 34, 420-428 (2011)
Sun, H., U. M. Reinscheid, E. L. Whitson, E. J. d'Auvergne, C. M. Ireland, A. Navarro-Vazquez and C. Griesinger:
Challenge of large-scale motion for residual dipolar coupling based analysis of configuration: The case of fibrosterol sulfate A.
Journal of the American Chemical Society 133, 14629-14636 (2011)
Sun, H., E. J. d'Auvergne, U. M. Reinscheid, L. C. Dias, C. K. Z. Andrade, R. O. Rocha and C. Griesinger:
Bijvoet in solution reveals unexpected stereoselectivity in a Michael addition.
Chemistry 17, 1811-1817 (2011)
Swanson, W. H., H. Sun and B. B. Lee:
Author response: Frequency-doubling technology and parasol cells.
Investigative Ophthalmology and Visual Science 52, 3759-3760 (2011)
Swanson, W. H., H. Sun, B. B. Lee and D. Cao:
Responses of primate retinal ganglion cells to perimetric stimuli.
Investigative Ophthalmology and Visual Science 52, 764-771 (2011)
Szabo, N. E., T. Y. Zhao, M. Cankaya, A. Stoykova, X. L. Zhou and G. Alvarez-Bolado:
Interaction between axons and specific populations of surrounding cells is indispensable for collateral formation in the mammillary system.
PLoS ONE 6, e20315 (2011)
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Tatic, T., S. Hermann, M. John, A. Loquet, A. Lange and D. Stalke:
Pure α-metallated benzyllithium from a single-crystal-to-single-crystal transition.
Thiha, A., D. Vogel, B. Chapuy, D. Wenzel, M. Oppermann, R. Koch, T. Hupfeld, L. Truemper and G. G. Wulf: Exosomal shielding of B-cell lymphoma from humoral immunotherapy. In: Onkologie, 34, Supplement 6, (2011) 76
Tisler, J., R. Reuter, A. Laemmle, F. Jelezko, G. Balasubramanian, P. R. Hemmer, F. Reinhard and J. Wrachtrup:
Highly efficient FRET from a single nitrogen-vacancy center in nanodiamonds to a single organic molecule.
ACS Nano 5, 7893-7898 (2011)
Tkach, I., G. Sicoli, C. Höbartner and M. Bennati:
A dual-mode microwave resonator for double electron–electron spin resonance spectroscopy at W-band microwave frequencies.
Journal of Magnetic Resonance 209, 341-346 (2011)
Tonnesen, J., F. Nadrigny, K. I. Willig, R. Wedlich-Söldner and U. V. Nägerl:
Two-color STED microscopy of living synapses using a single laser-beam pair.
Biophysical Journal 101, 2545-2552 (2011)
Totaro, A., F. Renzi, G. La Fata, C. Mattiolo, M. Raabe, H. Urlaub and T. Achsel:
The human Pat1b protein: A novel mRNA deadenylation factor identified by a new immunoprecipitation technique.
Nucleic Acids Research 39, 635-647 (2011)
Troe, J. and V. G. Ushakov:
Revisiting falloff curves of thermal unimolecular reactions.
Journal of Chemical Physics 135, 054304 (2011)
Troe, J.:
The thermal dissociation/recombination reaction of hydrogen peroxide H2</SUB>O<SUB>2(+M) double left right arrow 2OH(+M) III. Analysis and representation of the temperature and pressure dependence over wide ranges.
Combustion and Flame 158, 594-601 (2011)
Tzivelekidis, T., T. Jank, C. Pohl, A. Schlosser, S. Rospert, C. R. Knudsen, M. V. Rodnina, Y. Belyi and K. Aktories:
Aminoacyl-tRNA-charged eukaryotic elongation factor 1A is the bona fide substrate for legionella pneumophila effector glucosyltransferases.
PLoS ONE 6, e29525 (2011)
Türke, M. T.:
Development of dynamic nuclear polarization in liquids at 0.35 T and 3.5 T for high-resolution NMR.
Saturation factor of nitroxide radicals in liquid DNP by pulsed ELDOR experiments.
Physical Chemistry Chemical Physics 13, 3630-3633 (2011)
U
Ucar, A., V. Vafaizadeh, K. Chowdhury and B. Groner:
MicroRNA dependent regulation of the microenvironment and the epithelial stromal cell interactions in the mouse mammary gland.
Cell Cycle 10, 563-565 (2011)
Uecker, M., T. J. Sumpf and J. Frahm:
Reply to: MRI resolution enhancement: How useful are shifted images obtained by changing the demodulation frequency?
Magnetic Resonance in Medicine 66, 1511-1512 (2011)
Ullal, C. K., S. Primpke, R. Schmidt, U. Böhm, A. Egner, P. Vana and S. W. Hell:
Flexible microdomain specific staining of block copolymers for 3D optical nanoscopy.
Macromolecules 44, 7508-7510 (2011)
Urban, N., K. Willig and S. W. Hell:
STED nanoscopy of actin dynamics in synapses deep inside living brain slices.
Biophysical Journal 101, 1277-1284 (2011)
V
Vaiana, A. C., L. V. Bock, C. Blau, N. Fischer, H. Stark, W. Wintermeyer, M. V. Rodnina and H. Grubmüller: Molecular dynamics simulations of ribosomal translocation based on cryo-EM data. In: European Biophysics Journal with Biophysics Letters, 40, Supplement 1, (2011) 119
van den Bogaart, G., K. Meyenberg, H. J. Risselada, H. Amin, K. I. Willig, B. E. Hubrich, M. Dier, S. W. Hell, H. Grubmüller, U. Diederichsen and R. Jahn:
Membrane protein sequestering by ionic protein–lipid interactions.
Nature 479, 552-555 (2011)
van den Bogaart, G. and R. Jahn:
Inside insight to membrane fusion.
Proceedings of the National Academy of Sciences of the United States of America 108, 11729-11730 (2011)
van den Bogaart, G., S. Thutupalli, H. J. Risselada, K. Meyenberg, M. Holt, D. Riedel, U. Diederichsen, S. Herminghaus, H. Grubmüller and R. Jahn:
Synaptotagmin-1 may be a distance regulator acting upstream of SNARE nucleation.
Nature Structural and Molecular Biology 18, 805-812 (2011)
Vazquez-Pianzola, P., H. Urlaub and B. Suter:
Pabp binds to the osk 3'UTR and specifically contributes to osk mRNA stability and oocyte accumulation.
Developmental Biology 357, 404-418 (2011)
Vennekate, H., A. Walter, D. Fischer, J. Schroeder and D. Schwarzer:
Photodecarbonylation of diphenylcyclopropenone - A direct pathway to electronically excited diphenylacetylene?
Zeitschrift für Physikalische Chemie 225, 1089-1104 (2011)
Vicidomini, G., G. Moneron, K. Y. Han, V. Westphal, H. Ta, M. Reuss, J. Engelhardt, C. Eggeling and S. W. Hell:
Sharper low-power STED nanoscopy by time gating.
Nature Methods 8, 571-573 (2011)
Vitiello, G., A. Falanga, M. Galdiero, D. Marsh, S. Galdiero and G. D'Errico:
Lipid composition modulates the interaction of peptides deriving from herpes simplex virus type I glycoproteins B and H with biomembranes.
Biochimica et Biophysica Acta-Biomembranes 1808, 2517-2526 (2011)
von der Malsburg, K., J. M. Müller, M. Bohnert, S. Oeljeklaus, P. Kwiatkowska, T. Becker, A. Loniewska-Lwowska, S. Wiese, S. Rao, D. Milenkovic, D. P. Hutu, R. M. Zerbes, A. Schulze-Specking, H. E. Meyer, J. C. Martinou, S. Rospert, P. Rehling, C. Meisinger, M. Veenhuis, B. Warscheid, I. J. van der Klei, N. Pfanner, A. Chacinska and M. van der Laan:
Dual role of mitofilin in mitochondrial membrane organization and protein biogenesis.
Developmental Cell 21, 694-707 (2011)
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Wachowius, F. and C. Höbartner:
Probing essential nucleobase functional groups in aptamers and deoxyribozymes by nucleotide analogue interference mapping of DNA.
Journal of the American Chemical Society 133, 14888-14891 (2011)
Walter, K.:
Correlated and further dynamics in proteins by NMR spectroscopy.
Wehner, P., I. Snitsar, H. Urlaub and A. Borchers:
RACK1 is a novel interaction partner of PTK7 that is required for neural tube closure.
Development 138, 1321-1327 (2011)
Wenzel, D., F. Palladino and M. Jedrusik-Bode:
Epigenetics in C. elegans: Facts and challenges.
Genesis 49, 647-661 (2011)
Wildanger, D., J. R. Maze and S. W. Hell:
Diffraction unlimited all-optical recording of electron spin resonances.
Physical Review Letters 107, 017601 (2011)
Will, C. L. and R. Lührmann:
Spliceosome structure and function.
Cold Spring Harbor Perspectives in Biology 3, a003707 (2011)
Willig, K. I., A. C. Stiel, T. Brakemann, S. Jakobs and S. W. Hell:
Dual-label STED nanoscopy of living cells using photochromism.
Nano Letters 11, 3970-3973 (2011)
Wintermeyer, W. and M. V. Rodnina:
Genauigkeit und Geschwindigkeit der Proteinsynthese.
BIOspektrum 17, 389-392 (2011)
Wintermeyer, W., A. Savelsbergh, A. L. Konevega, F. Peske, V. I. Katunin, Y. P. Semenkov, N. Fischer, H. Stark and M. V. Rodnina:
Functions of elongation factor G in translocation and ribosome recycling.
In: Ribosomes, Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien/New York (2011) 329-338
Wodtke, A. M., R. Cooper, C. Bartels, T. Schäfer, J. LaRue, Z. Li and D. J. Auerbach: Energy transfer at metal surfaces beyond the Born-Oppenheimer approximation. In: Abstracts of Papers of the American Chemical Society, 241 (2011) 139-PHYS, Sequ. No.: 139-PHYS
Wohlgemuth, I., C. Pohl, J. Mittelstät, A. L. Konevega and M. V. Rodnina:
Evolutionary optimization of speed and accuracy of decoding on the ribosome.
Philosophical Transactions of the Royal Society of London B 366, 2979-2986 (2011)
Wurm, C. A., D. Neumann, M. A. Lauterbach, B. Harke, A. Egner, S. W. Hell and S. Jakobs:
Nanoscale distribution of mitochondrial import receptor Tom20 is adjusted to cellular conditions and exhibits an inner-cellular gradient.
Proceedings of the National Academy of Sciences of the United States of America 108, 13546-13551 (2011)
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Zhang, Z., O. Kelemen, M. A. van Santen, S. M. Yelton, A. E. Wendlandt, V. M. Sviripa, M. Bollen, M. Beullens, H. Urlaub, R. Lührmann, D. S. Watt and S. Stamm:
Synthesis and characterization of pseudocantharidins, novel phosphatase modulators that promote the inclusion of exon 7 into the SMN (survival of motoneuron) pre-mRNA.
Journal of Biological Chemistry 286, 10126-10136 (2011)
Zhang, S., N. Gersdorff and J. Frahm:
Real-time magnetic resonance imaging of temporomandibular joint dynamics.
The Open Medical Imaging Journal 5, 1-9 (2011)
Zilly, F. E., N. D. Halemani, D. Walrafen, L. Spitta, A. Schreiber, R. Jahn and T. Lang:
Ca2+ induces clustering of membrane proteins in the plasma membrane via electrostatic interactions.
EMBO Journal 30, 1209-1220 (2011)
Zimek, A. and K. Weber:
Flanking genes of an essential gene give information about the evolution of metazoa.
European Journal of Cell Biology 90, 356-364 (2011)
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