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Marina Rodnina
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Publications
1997   1998   1999   2000   2001   2002   2003   2004   2005   2006   2007   2008   2009   2010   2011   2012  

The listing of 2012 is incomplete.
Publications Department of Physical Biochemistry

2012
Cox, G., G. S. Thompson, H. T. Jenkins, F. Peske, A. Savelsbergh, M. V. Rodnina, W. Wintermeyer, S. W. Homans, T. A. Edwards and A. J. O'Neill:
Ribosome clearance by FusB-type proteins mediates resistance to the antibiotic fusidic acid.
Proceedings of the National Academy of Sciences of the United States of America 109, 2102-2107 (2012)

2011
Burakovsky, D. E., P. V. Sergiev, M. A. Steblyanko, A. L. Konevega, A. A. Bogdanov and O. A. Dontsova:
The structure of helix 89 of 23S rRNA is important for peptidyl transferase function of Escherichia coli ribosome.
FEBS Letters 585, 3073-3078 (2011)
Demeter, A., S. I. Druzhinin, S. A. Kovalenko, T. A. Senyushkina and K. A. Zachariasse:
Dual fluorescence and ultrafast intramolecular charge transfer with 6-N,N-dialkylaminopurines. A two-state model.
Journal of Physical Chemistry A 115, 1521-1537 (2011)
Galievsky, V. A., S. I. Druzhinin, A. Demeter, S. A. Koyalenko, T. Senyushkina, P. Mayer and K. A. Zachariasse:
Presence and absence of excited state intramolecular charge transfer with the six isomers of dicyano-N,N-dimethylaniline and dicyano-(N-methyl-N-isopropyl)aniline.
Journal of Physical Chemistry A 115, 10823-10845 (2011)
Gregory, S. T., H. Demirci, J. F. Carr, R. Belardinelli, J. R. Thompson, D. Cameron, D. Rodriguez-Correa, F. Murphy, G. Jogl and A. E. Dahlberg:
Genetic and crystallographic approaches to investigating ribosome structure and function.
In: Ribosomes Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien (2011) 57-64
Julian, P., P. Milon, X. Agirrezabala, G. Lasso, D. Gil, M. V. Rodnina and M. Valle:
The cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli.
PLoS Biology 9, e1001095 (2011)
Kotini, S. B.:
Molecular mechanism of selenocysteine incorporation in bacterial translation.
Georg-August-Universität Göttingen, Göttingen (2011)
Kuhlenkoetter, S., W. Wintermeyer and M. V. Rodnina:
Different substrate-dependent transition states in the active site of the ribosome.
Nature 476, 351-354 (2011)
Mittelstät, J., A. L. Konevega and M. V. Rodnina:
Distortion of tRNA upon near-cognate codon recognition on the ribosome.
Journal of Biological Chemistry 286, 8158-8164 (2011)
Rodnina, M. V. and W. Wintermeyer:
The ribosome as a molecular machine: The mechanism of tRNA–mRNA movement in translocation.
Biochemical Society Transactions 39, 658-662 (2011)
Rodnina, M. V.:
Mechanisms of decoding and peptide bond formation.
In: Ribosomes, Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien/New York (2011) 199-212
Rodnina, M. V., W. Wintermeyer and R. Green:
Ribosomes Structure, Function, and Dynamics.
Springer Verlag, Wien/New York (2011) 442p.

Sergiev, P. V., A. Y. Golovina, I. V. Prokhorova, O. V. Sergeeva, I. A. Osterman, M. V. Nesterchuk, D. E. Burakovskiy, A. A. Bogdanov and O. A. Dontsova:
Modifications of ribosomal RNA: From enzymes to function.
In: Ribosomes Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien (2011) 97-110
Tzivelekidis, T., T. Jank, C. Pohl, A. Schlosser, S. Rospert, C. R. Knudsen, M. V. Rodnina, Y. Belyi and K. Aktories:
Aminoacyl-tRNA-charged eukaryotic elongation factor 1A is the bona fide substrate for legionella pneumophila effector glucosyltransferases.
PLoS ONE 6, e29525 (2011)
Vaiana, A. C., L. V. Bock, C. Blau, N. Fischer, H. Stark, W. Wintermeyer, M. V. Rodnina and H. Grubmüller: Molecular dynamics simulations of ribosomal translocation based on cryo-EM data. In: European Biophysics Journal with Biophysics Letters, 40, Supplement 1, (2011) 119
Wintermeyer, W. and M. V. Rodnina:
Genauigkeit und Geschwindigkeit der Proteinsynthese.
BIOspektrum 17, 389-392 (2011)
Wintermeyer, W., A. Savelsbergh, A. L. Konevega, F. Peske, V. I. Katunin, Y. P. Semenkov, N. Fischer, H. Stark and M. V. Rodnina:
Functions of elongation factor G in translocation and ribosome recycling.
In: Ribosomes, Structure, Function, and Dynamics, (Eds.) Rodnina, M. V.; Wintermeyer, W.; Green, R., Springer Verlag, Wien/New York (2011) 329-338
Wohlgemuth, I., C. Pohl, J. Mittelstät, A. L. Konevega and M. V. Rodnina:
Evolutionary optimization of speed and accuracy of decoding on the ribosome.
Philosophical Transactions of the Royal Society of London B 366, 2979-2986 (2011)

2010
Burakovsky, D. E., P. V. Sergiev, M. A. Steblyanko, A. V. Kubarenko, A. L. Konevega, A. A. Bogdanov, M. V. Rodnina and O. A. Dontsova:
Mutations at the accommodation gate of the ribosome impair RF2-dependent translation termination.
RNA 16, 1848-1853 (2010)
Byrne, R. T., A. L. Konevega, M. V. Rodnina and A. A. Antson:
The crystal structure of unmodified tRNAPhe from Escherichia coli.
Nucleic Acids Research 38, 4154-4162 (2010)
Fischer, N., A. L. Konevega, W. Wintermeyer, M. V. Rodnina and H. Stark:
Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy.
Nature 466, 329-333 (2010)
Holtkamp, W.:
Dynamics of SRP-ribosome interactions.
Universität Witten/Herdecke, Witten/Herdecke (2010)
Milon, P., M. Carotti, A. L. Konevega, W. Wintermeyer, M. V. Rodnina and C. O. Gualerzi:
The ribosome-bound initiation factor 2 recruits initiator tRNA to the 30S initiation complex.
EMBO Reports 11, 312-316 (2010)
Paleskava, A., A. L. Konevega and M. V. Rodnina:
Thermodynamic and kinetic framework of selenocysteyl-tRNA(Sec) recognition by elongation factor SelB.
The Journal of Biological Chemistry 285, 3014-3020 (2010)
Rodnina, M. V.:
Protein synthesis meets ABC ATPases: new roles for Rli1/ABCE1.
EMBO Reports 11, 143-144 (2010)
Rodnina, M. V. and W. Wintermeyer:
The ribosome goes Nobel.
Trends in Biochemical Sciences 35, 1-5 (2010)
Wohlgemuth, I., C. Pohl and M. V. Rodnina:
Optimization of speed and accuracy of decoding in translation.
The EMBO Journal 29, 3701-3709 (2010)

2009
Adio, S. and G. Woehlke:
Properties of the Kinesin-3 NcKin3 motor domain and implications for neck function.
FEBS Journal 276, 3641-3655 (2009)
Buskiewicz, I. A., J. Joeckel, M. V. Rodnina and W. Wintermeyer:
Conformation of the signal recognition particle in ribosomal targeting complexes.
RNA 15, 44-54 (2009)
Paleskava, A.:
Recognition of selenocysteyl-tRNASec by elangation factor SelB.
Universität Witten/Herdecke, Witten/Herdecke (2009)
Rodnina, M. V.: Kinetics of mRNA and tRNA selection by the ribosome. In: Journal of Biomolecular Structure and Dynamics, 26, 13, (2009) 790
Rodnina, M. V.:
Long-range signalling in activation of the translational GTPase EF-Tu.
EMBO Journal 28, 619-620 (2009)
Rodnina, M. V.:
Visualizing the protein synthesis machinery: new focus on the translational GTPase elongation factor Tu.
Proceedings of the National Academy of Sciences of the United States of America 106, 969-970 (2009)
Rodnina, M. V. and W. Wintermeyer:
Recent mechanistic insights into eukaryotic ribosomes.
Current Opinion in Cell Biology 21, 435-443 (2009)
Savelsbergh, A., M. V. Rodnina and W. Wintermeyer:
Distinct functions of elongation factor G in ribosome recycling and translocation.
RNA 15, 772-780 (2009)

2008
Bornemann, T., J. Joeckel, M. V. Rodnina and W. Wintermeyer:
Signal sequence–independent membrane targeting of ribosomes containing short nascent peptides within the exit tunnel.
Nature Structural and Molecular Biology 15, 494-499 (2008)
Bruell, C. M., C. Eichholz, A. Kubarenko, V. Post, V. I. Katunin, S. N. Hobbie, M. V. Rodnina and E. C. Boettger:
Conservation of bacterial protein synthesis machinery: initiation and elongation in mycobacterium smegmatis.
Biochemistry 47, 8828-8839 (2008)
Julian, P., A. L. Konevega, S. H. W. Scheres, M. Lazaro, D. Gil, W. Wintermeyer, M. V. Rodnina and M. Valle:
Structure of ratcheted ribosomes with tRNAs in hybrid states.
Proceedings of the National Academy of Sciences of the United States of America 105, 16924-16927 (2008)
Kingery, D. A., E. Pfund, R. M. Voorhees, K. Okuda, I. Wohlgemuth, D. E. Kitchen, M. V. Rodnina and S. A. Strobel:
An uncharged amine in the transition state of the ribosornal peptidyl transfer reaction.
Chemistry and Biology 15, 493-500 (2008)
Lancaster, L. E., A. Savelsbergh, C. Kleanthous, W. Wintermeyer and M. V. Rodnina:
Colicin E3 cleavage of 16S rRNA impairs decoding and accelerates tRNA translocation on Escherichia coli ribosomes.
Molecular Microbiology 69, 390-401 (2008)
Milon, P., A. L. Konevega, C. O. Gualerzi and M. V. Rodnina:
Kinetic checkpoint at a late step in translation initiation.
Molecular Cell 30, 712-720 (2008)
Rodnina, M. V.:
Peptidyl transferase mechanism: the ribosome as a ribozyme.
In: Ribozymes and RNA catalysis, (Eds.) Lilley, D. M. J.; Eckstein, F., Roy. Soc. Chem., Cambridge (2008) 270-294
Wohlgemuth, I., S. Brenne, M. Beringer and M. V. Rodnina:
Modulation of the rate of peptidyl transfer on the ribosome by the nature of substrates.
Journal of Biological Chemistry 283, 32229-32235 (2008)

2007
Beringer, M. and M. V. Rodnina:
Importance of tRNA interactions with 23S rRNA for peptide bond formation on the ribosome: studies with substrate analogs.
Biological Chemistry 388, 687-691 (2007)
Beringer, M. and M. V. Rodnina:
The ribosomal peptidyl transferase.
Molecular Cell 26, 311-321 (2007)
Clancy, J. L., M. Nousch, M. V. Rodnina and T. Preiss:
The ins and outs of translation.
Genome Biology 8, 321.1-321.4 (2007)
Fischer, N., A. Paleskava, K. B. Gromadski, A. L. Konevega, M. C. Wahl, H. Stark and M. V. Rodnina:
Towards understanding selenocysteine incorporation into bacterial proteins.
Biological Chemistry 388, 1061-1067 (2007)
Gromadski, K. B., T. Schuemmer, A. Stromgaard, C. R. Knudsen, T. G. Kinzy and M. V. Rodnina:
Kinetics of the interactions between yeast elongation factors 1A and 1Bα, guanine nucleotides, and aminoacyl-tRNA.
Journal of Biological Chemistry 282, 35629-35637 (2007)
Konevega, A. L., N. Fischer, Y. P. Semenkov, H. Stark, W. Wintermeyer and M. V. Rodnina:
Spontaneous reverse movement of mRNA-bound tRNA through the ribosome.
Nature Structural Molecular Biology 14, 318-324 (2007)
Lancaster, L. E., W. Wintermeyer and M. V. Rodnina:
Colicins and their potential in cancer treatment.
Blood Cells, Molecules, and Diseases 38, 15-18 (2007)
Milon, P., A. L. Konevega, F. Peske, A. Fabbretti, C. O. Gualerzi and M. V. Rodnina:
Transient kinetics, fluorescence, and FRET in studies of initiation of translation in bacteria.
Methods in Enzymology 430, 1-30 (2007)
Rodnina, M. V., M. Beringer and W. Wintermeyer:
How ribosomes make peptide bonds.
Trends in Biochemical Sciences 32, 20-26 (2007)
Schuemmer, T., K. B. Gromadski and M. V. Rodnina:
Mechanism of EF-Ts-catalyzed Guanine nucleotide exchange in EF-Tu: Contribution of interactions mediated by Helix B of EF-Tu.
Biochemistry 46, 4977-4984 (2007)

2006
Bieling, P., M. Beringer, S. Adio and M. V. Rodnina:
Peptide bond formation does not involve acid-base catalysis by ribosomal residues.
Nature Structural & Molecular Biology 13, 423-428 (2006)
Dahl, L. D., H. J. Wieden, M. V. Rodnina and C. R. Knudsen:
The importance of P-loop and domain movements in EF-Tu for guanine nucleotide exchange.
Journal of Biological Chemistry 281, 21139-21146 (2006)
Daviter, T., K. B. Gromadski and M. V. Rodnina:
The ribosome’s response to codon–anticodon mismatches.
Biochimie 88, 1001-1011 (2006)
Gromadski, K. B., T. Daviter and M. V. Rodnina:
A uniform response to mismatches in codon-anticodon complexes ensures ribosomal fidelity.
Molecular Cell 21, 369-377 (2006)
Kothe, U., A. Paleskava, A. L. Konevega and M. V. Rodnina:
Single-step purification of specific tRNAs by hydrophobic tagging.
Analytical Biochemistry 356, 148-150 (2006)
Kothe, U. and M. V. Rodnina:
Delayed release of inorganic phosphate from elongation factor Tu following GTP hydrolysis on the ribosome.
Biochemistry 45, 12767-12774 (2006)
Kubarenko, A., P. Sergiev, W. Wintermeyer, O. A. Dontsova and M. V. Rodnina:
Involvement of helix 34 of 16 S rRNA in decoding and translocation on the ribosome.
Journal of Biological Chemistry 281, 35235-35244 (2006)
Milon, P., E. Tischenko, J. Tomsic, E. Caserta, G. Folkers, A. La Teana, M. V. Rodnina, C. L. Pon, R. Boelens and C. O. Gualerzi:
The nucleotide-binding site of bacterial translation initiation factor 2 (IF2) as a metabolic sensor.
Proceedings of the National Academy of Sciences of the United States of America 103, 13962-13967 (2006)
Pisareva, V. P., A. V. Pisarev, C. U. Hellen, M. V. Rodnina and T. V. Pestova:
Kinetic analysis of interaction of eukaryotic release factor 3 with guanine nucleotides.
Journal of Biological Chemistry 281, 40224-40235 (2006)
Rodnina, M. V., M. Beringer and W. Wintermeyer:
Mechanism of peptide bond formation on ribosomes.
Quaterly Reviews of Biophysics 39, 203-225 (2006)
Wilden, B., A. Savelsbergh, M. V. Rodnina and W. Wintermeyer:
Role and timing of GTP binding and hydrolysis during EF-G-dependent tRNA translocation on the ribosome.
Proceedings of the National Academy of Sciences of the United States of America 103, 13670-13675 (2006)
Wohlgemuth, I., M. Beringer and M. V. Rodnina:
Rapid peptide bond formation on isolated 50S ribosomal subunits.
EMBO Reports 7, 699-703 (2006)

2005
Beringer, M., C. Bruell, L. Xiong, P. Pfister, V. I. Katunin, A. Mankin, E. C. Boettger and M. V. Rodnina:
Essential mechanisms in the catalysis of peptide bond formation on the ribosome.
Journal of Biological Chemistry 280, 36065-36072 (2005)
Buskiewicz, I., F. Peske, H. J. Wieden, I. Gryczynski, M. V. Rodnina and W. Wintermeyer:
Conformations of the signal recognition particle protein Ffh from Escherichia coli as determined by FRET.
Journal of Molecular Biology 351, 417-430 (2005)
Buskiewicz, I., A. Kubarenko, F. Peske, M. V. Rodnina and W. Wintermeyer:
Domain rearrangement of SRP protein Ffh upon binding 4.5S RNA and the SRP receptor FtsY.
RNA 11, 947-957 (2005)
Diaconu, M., U. Kothe, F. Schluenzen, N. Fischer, J. Harms, A. G. Tonevitsky, H. Stark, M. V. Rodnina and M. C. Wahl:
Structural basis for the function of the ribosomal L7/12 stalk in factor binding and GTPase activation.
Cell 121, 991-1004 (2005)
Gu, S. Q., J. Joeckel, P. Beinker, J. Warnecke, Y. P. Semenkov, M. V. Rodnina and W. Wintermeyer:
Conformation of 4.5S RNA in the signal recognition particle and on the 30S ribosomal subunit.
RNA 11, 1374-1384 (2005)
Kaiser, J. T., K. Gromadski, M. Rother, H. Engelhardt, M. V. Rodnina and M. C. Wahl:
Structural and functional investigation of a putative archaeal selenocysteine synthase.
Biochemistry 44, 13315-13327 (2005)
Peske, F., M. V. Rodnina and W. Wintermeyer:
Sequence of steps in ribosome recycling as defined by kinetic analysis.
Molecular Cell 18, 403-412 (2005)
Rodnina, M. V., K. B. Gromadski, U. Kothe and H. J. Wieden:
Recognition and selection of tRNA in translation.
FEBS Letters 579, 938-942 (2005)
Rodnina, M. V., M. Beringer and M. Bieling:
Ten remarks on peptide bond formation on the ribosome.
Biochemical Society Transactions 33, 493-498 (2005)
Savelsbergh, A., D. Mohr, U. Kothe, W. Wintermeyer and M. V. Rodnina:
Control of phosphate release from elongation factor G by ribosomal protein L7/12.
EMBO Journal 24, 4316-4323 (2005)

2004
Buskiewicz, I., E. Deuerling, S. Q. Gu, J. Joeckel, M. V. Rodnina, B. Bukau and W. Wintermeyer:
Trigger factor binds to ribosome–signal-recognition particle (SRP) complexes and is excluded by binding of the SRP receptor.
Proceedings of the National Academy of Sciences of the United States of America 101, 7902-7906 (2004)
Eversole-Hesslein, A., V. I. Katunin, M. Beringer, A. B. Kosek, M. V. Rodnina and S. Strobel:
Exploration of the conserved A+C wobble pair within the ribosomal peptidyl transferase center using affinity purified mutant ribosomes.
Nucleic Acids Research 32, 3760-3770 (2004)
Gromadski, K. B. and M. V. Rodnina:
Streptomycin interferes with conformational coupling between codon recognition and GTPase activation on the ribosome.
Nature Structural & Molecular Biology 11, 316-322 (2004)
Gromadski, K. B. and M. V. Rodnina:
Kinetic determinants of high-fidelity tRNA discrimination on the ribosome.
Molecular Cell 13, 191-200 (2004)
Konevega, A. L., N. G. Soboleva, V. I. Makhno, Y. P. Semenkov, W. Wintermeyer, M. V. Rodnina and V. I. Katunin:
Purine bases at position 37 of tRNA stabilize codon–anticodon interaction in the ribosomal A site by stacking and Mg2+-dependent interactions.
RNA 10, 90-101 (2004)
Kothe, U., H. J. Wieden, D. Mohr and M. V. Rodnina:
Interaction of helix D of elongation factor Tu with helices 4 and 5 of protein L7/12 on the ribosome.
Journal of Molecular Biology 336, 1011-1021 (2004)
Peske, F., A. Savelsbergh, V. I. Katunin, M. V. Rodnina and W. Wintermeyer:
Conformational changes of the small ribosomal subunit during elongation factor G-dependent tRNA–mRNA translocation.
Journal of Molecular Biology 343, 1183-1194 (2004)
Sievers, A., M. Beringer, M. V. Rodnina and R. Wolfenden:
The ribosome as an entropy trap.
Proceedings of the National Academy of Sciences of the United States of America 101, 7897-7901 (2004)
Wintermeyer, W., F. Peske, M. Beringer, K. B. Gromadski, A. Savelsbergh and M. V. Rodnina:
Mechanisms of elongation on the ribosome: dynamics of a macromolecular machine.
Biochemical Society Transactions 32, 733-737 (2004)

2003
Beringer, M., A. Adio, W. Wintermeyer and M. V. Rodnina:
The G2447A mutation does not affect ionization of a ribosomal group taking part in peptide bond formation.
RNA 9, 919-922 (2003)
Daviter, T., H. J. Wieden and M. V. Rodnina:
Essential role of histidine 84 in elongation factor Tu for the chemical step of GTP hydrolysis on the ribosome.
Journal of Molecular Biology 332, 689-699 (2003)
Gu, S. Q., F. Peske, H. J. Wieden, M. V. Rodnina and W. Wintermeyer:
The signal recognition particle binds to protein L23 at the peptide exit of the Escherichia coli ribosome.
RNA 9, 566-573 (2003)
Kubarenko, A. V., I. N. Lavrik, P. V. Sergiev, M. Heupel, M. V. Rodnina, W. Wintermeyer, A. A. Bogdanov and O. A. Dontsova:
Contacts of elongation factor G with the small ribosomal subunit: cross-linking approach.
Doklady Biochemistry and Biophysics 393, 312-315 (2003)
Rodnina, M. V. and W. Wintermeyer:
Peptide bond formation on the ribosome: structure and mechanism.
Current Opinion in Structural Biology 13, 334-340 (2003)
Rodnina, M. V. and W. Wintermeyer:
Das Ribosom: Struktur und Funktionen eines Mega-Ribozyms.
Biospektrum 2, 138-141 (2003)
Savelsbergh, A., V. I. Katunin, D. Mohr, F. Peske, M. V. Rodnina and W. Wintermeyer:
An elongation factor G-induced ribosome rearrangement precedes tRNA-mRNA translocation.
Molecular Cell 11, 1517-1523 (2003)

2002
Gromadski, K. B., H. J. Wieden and M. V. Rodnina:
Kinetic mechanism of elongation factor Ts-catalyzed nucleotide exchange in elongation factor Tu.
Biochemistry 41, 162-169 (2002)
Katunin, V. I., A. Savelsbergh, M. V. Rodnina and W. Wintermeyer:
Coupling of GTP hydrolysis by elongation factor G to translocation and factor recycling on the ribosome.
Biochemistry 41, 12806-12812 (2002)
Katunin, V. I., G. W. Muth, S. A. Strobel, W. Wintermeyer and M. V. Rodnina:
Important contribution to catalysis of peptide bond formation by a single ionizing group within the ribosome.
Molecular Cell 10, 339-346 (2002)
Mohr, D., W. Wintermeyer and M. V. Rodnina:
GTPase activation of elongation factors Tu and G on the ribosome.
Biochemistry 41, 12520-12528 (2002)
Rodnina, M. V., T. Daviter, K. B. Gromadski and W. Wintermeyer:
Structural dynamics of ribosomal RNA during decoding on the ribosome.
Biochimie 84, 745-754 (2002)
Schirmer, J., H. J. Wieden, M. V. Rodnina and K. Aktories:
Inactivation of the elongation factor Tu by mosquitocidal toxin-catalyzed mono-ADP-ribosylation.
Applied and Environmental Microbiology 68, 4894-4899 (2002)
Stark, H., M. V. Rodnina, H. J. Wieden, F. Zemlin, W. Wintermeyer and M. van Heel:
Ribosome interactions of aminoacyl-tRNA and elongation factor Tu in the codon-recognition complex.
Nature Structural Biology 9, 849-854 (2002)
Wieden, H. J., K. B. Gromadski, D. N. Rodnin and M. V. Rodnina:
Mechanism of elongation factor (EF)-Ts-catalyzed nucleotide exchange in EF-Tu: Contribution of contacts at the guanine base.
Journal of Biological Chemistry 277, 6032-6036 (2002)

2001
Jagath, J. R., N. B. Matassova, E. de Leeuw, J. M. Warnecke, G. Lentzen, M. V. Rodnina, J. Luirink and W. Wintermeyer:
Important role of the tetraloop region of 4.5S RNA in SRP binding to its receptor FtsY.
RNA 7, 293-301 (2001)
Knudsen, C., H. J. Wieden and M. V. Rodnina:
The importance of structural transitions of the switch II region for the functions of elongation factor Tu on the ribosome.
The Journal of Biological Chemistry 276, 22183-22190 (2001)
Matassova, N. B., M. V. Rodnina and W. Wintermeyer:
Elongation factor G-induced structural change in helix 34 of 16S rRNA related to translocation on the ribosome.
RNA 7, 1879-1885 (2001)
Rodnina, M. V., Y. P. Semenkov, A. Savelsbergh, V. I. Katunin, F. Peske, B. Wilden and W. Wintermeyer:
Mechanism of tRNA translocation on the ribosome.
Molecular Biology 35, 559-568 (2001)
Rodnina, M. V. and W. Wintermeyer:
Ribosome fidelity: tRNA discrimination, proofreading and induced fit.
Trends in Biochemical Science 26, 124-130 (2001)
Rodnina, M. V. and W. Wintermeyer:
Fidelity of aminoacyl-tRNA selection on the ribosome: kinetic and structural mechanisms.
Annual Review of Biochemistry 70, 415-435 (2001)
Wieden, H. J., W. Wintermeyer and M. V. Rodnina:
A common structural motif in elongation factor Ts and ribosomal protein L7/12 may be involved in the interaction with elongation factor Tu.
Journal of Molecular Evolution 52, 129-136 (2001)
Wintermeyer, W., A. Savelsbergh, Y. P. Semenkov, V. Katunin and M. V. Rodnina:
Mechanism of elongation factor G function in tRNA translocation on the ribosome.
In: Cold Spring Harbor Symposia on Quantitative Biology, Cold Spring Harbor Symposia on Quantitative Biology 66. Cold Spring Harbor Laboratory Press, New York (2001) 449-458

2000
Jagath, J. R., M. V. Rodnina and W. Wintermeyer:
Conformational changes in the bacterial SRP receptor FtsY upon binding of guanine nucleotides and SRP.
Journal of Molecular Biology 295, 745-753 (2000)
Mohr, D., W. Wintermeyer and M. V. Rodnina:
Arginines 29 and 59 of elongation factor G are important for GTP hydrolysis or translocation on the ribosome.
EMBO Journal 19, 3458-3464 (2000)
Pape, T., W. Wintermeyer and M. V. Rodnina:
Conformational switch in the decoding region of 16S rRNA during aminoacyl-tRNA selection on the ribosome.
Nature Structural Biology 7, 104-107 (2000)
Peske, F., N. B. Matassova, A. Savelsbergh, M. V. Rodnina and W. Wintermeyer:
Conformationally restricted elongation factor G retains GTPase activity but is inactive in translocation on the ribosome.
Molecular Cell 6, 501-505 (2000)
Piepenburg, O., T. Pape, J. A. Pleiss, W. Wintermeyer, O. C. Uhlenbeck and M. V. Rodnina:
Intact aminoacyl-tRNA is required to trigger GTP hydrolysis by elongationfFactor Tu on the ribosome.
Biochemistry 39, 1734-1738 (2000)
Rodnina, M. V., H. Stark, A. Savelsbergh, H. J. Wieden, D. Mohr, N. B. Matassova, F. Peske, T. Daviter, C. O. Gualerzi and W. Wintermeyer:
GTPases mechanisms and functions of translation factors on the ribosome.
Biological Chemistry 381, 377-387 (2000)
Rodnina, M. V., T. Pape, A. Savelsbergh, D. Mohr, N. B. Matassova and W. Wintermeyer:
Mechanisms of partial reactions of the elongation cycle catalyzed by elongation factors Tu and G.
In: The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions, (Eds.) Garrett, R. A.; Douthwaite, S. R.; Liljas, A.; Matheson, A. T.; Moore, P. B.; Noller, H. F., American Society of Microbiology Press, Washington D. C. (2000) 301-317
Savelsbergh, A., N. B. Matassova, M. V. Rodnina and W. Wintermeyer:
Role of domains 4 and 5 in elongation factor G functions on the ribosome.
Journal of Molecular Biology 300, 951-961 (2000)
Savelsbergh, A., D. Mohr, B. Wilden, W. Wintermeyer and M. V. Rodnina:
Stimulation of the GTPase activity of translation elongation factor G by ribosomal protein L7/12.
Journal of Biology Chemistry 275, 890-894 (2000)
Semenkov, Y. P., M. V. Rodnina and W. Wintermeyer:
Energetic contribution of tRNA hybrid state formation to translocation catalysis on the ribosome.
Nature Structural Biology 7, 1027-1031 (2000)
Stark, H., M. V. Rodnina, H. J. Wieden, M. van Heel and W. Wintermeyer:
Large-scale movement of elongation factor G and extensive conformational change of the ribosome during translocation.
Cell 3, 301-309 (2000)
Tomsic, J., L. Vitali, T. Daviter, A. Savelsbergh, R. Spurio, P. Striebeck, W. Wintermeyer, M. V. Rodnina and C. O. Gualerzi:
Late events of translation initiation in bacteria: a kinetic analysis.
EMBO Journal 19, 2127-2136 (2000)
Wintermeyer, W. and M. V. Rodnina:
Translational elongation factor G: a GTP-driven motor of the ribosome.
Essays in Biochemistry 35, 117-129 (2000)

1999
Borowski, C., M. V. Rodnina and W. Wintermeyer:
Truncated elongation factor G lacking the G domain promotes translocation of the 3' end but not of the anticodon domain of peptidyl-tRNA.
Proceedings of the National Academy of Sciences USA 93, 4202-4206 (1999)
Matassova, N. B., M. V. Rodnina, R. Endermann, H. P. Kroll, U. Pleiss, H. Wild and W. Wintermeyer:
Ribosomal RNA is the target for oxazolidinones, a novel class of translational inhibitors.
RNA 5, 939-947 (1999)
Pape, T., W. Wintermeyer and M. V. Rodnina:
Induced fit in initial selection and proofreading of aminoacyl-tRNA on the ribosome.
EMBO Journal 18, 3800-3807 (1999)
Rodnina, M. V., A. Savelsbergh, N. B. Matassova, V. I. Katunin, Y. P. Semenkov and W. Wintermeyer:
Thiostrepton inhibits the turnover but not the GTPase of elongation factor G on the ribosome.
Proceedings of the National Academy of Science of the United States of America 96, 9586-9590 (1999)
Rodnina, M. V., A. Savelsbergh and W. Wintermeyer:
Dynamics of translation on the ribosome: molecular mechanics of translocation.
FEMS Microbiology Reviews 23, 317-333 (1999)
Stark, H., M. van Heel, M. V. Rodnina, W. Wintermeyer and R. Brimacombe:
Visualisation of elongation factor Tu on the 70 S E. coli ribosome.
In: The RNA world, (Eds.) Gesteland, R.F.; Cech, T.R.; Atkins, J.F., Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY (1999) 691-693

1998
Jagath, J. R., M. V. Rodnina, G. Lentzen and W. Wintermeyer:
Interaction of Guanine Nucleotides with the Signal Recognition Particle from Escherichia coli.
Biochemistry 37, 15408-15413 (1998)
Pape, T., W. Wintermeyer and M. V. Rodnina:
Complete kinetic mechanism of elongation factor Tu-dependent binding of aminoacyl-tRNA to the A site of the E.coli ribosome.
EMBO Journal 17, 7490-7497 (1998)
Rodnina, M. V. and W. Wintermeyer:
Form follows function: structure of an elongation factor G-ribosome complex.
Proceedings of the National Academy of Scienes of the United States of America 95, 7237-7239 (1998)

1997
Rodnina, M. V., A. Savelsbergh, V. I. Katunin and W. Wintermeyer:
Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome.
Nature 385, 37-41 (1997)
Stark, H., M. V. Rodnina, J. Rinke-Appel, R. Brimacombe, W. Wintermeyer and M. van Heel:
Visualization of elongation factor Tu on the Escherichia coli ribosome.
Nature 389, 403-406 (1997)
Stark, H., E. V. Orlova, J. Rinke-Appel, N. Juenke, F. Mueller, M. V. Rodnina, W. Wintermeyer, R. Brimacombe and M. van Heel:
Arrangement of tRNAs in pre- and posttranslocational ribosomes revealed by electron cryomicroscopy.
Cell 88, 19-28 (1997)

1996
Borowski, C., M. V. Rodnina and W. Wintermeyer:
Truncated elongation factor G lacking the G domain promotes translocation of the 3' end but not of the anticodon domain of peptidyl-tRNA.
Proceedings of the National Academy of Scienes of the United States of America 93, 4202-4206 (1996)
Rodnina, M. V., T. Pape, R. Fricke, L. Kuhn and W. Wintermeyer:
Initial binding of the elongation factor Tu GTP aminoacyl-tRNA complex preceding codon recognition on the ribosome.
The Journal of Biological Chemistry 271, 646-652 (1996)
Semenkov, Y. P., M. V. Rodnina and W. Wintermeyer:
The "allosteric three-site model" of elongation cannot be confirmed in a well-defined ribosome system from Escherichia coli.
Proceedings of the National Academy of Scienes of the United States of America 93, 12183-12188 (1996)
Vorstenbosch, E., T. Pape, M. V. Rodnina, B. Kraal and W. Wintermeyer:
The G222D mutation in elongation factor Tu inhibits the codon-induced conformational changes leading to GTPase activation on the ribosome.
EMBO Journal 15, 6766-6774 (1996)

1995
Rodnina, M. V., T. Pape, R. Fricke and W. Wintermeyer:
Elongation factor Tu, a GTPase triggered by codon recognition on the ribosome: mechanism and GTP consumption.
Biochemistry and Cell Biology 73, 1221-1227 (1995)
Rodnina, M. V., R. Fricke, L. Kuhn and W. Wintermeyer:
Codon-dependent conformational change of elongation factor Tu preceding GTP hydrolysis on the ribosome.
EMBO Journal 14, 2613-2619 (1995)
Rodnina, M. V. and W. Wintermeyer:
GTP consumption of elongation factor Tu during translation of heteropolymeric mRNAs.
Proceedings of the National Academy of Scienes of the United States of America 92, 1945-1949 (1995)
Zeidler, W., C. Egle, S. Ribeiro, A. Wagner, V. I. Katunin, R. Kreutzer, M. V. Rodnina, W. Wintermeyer and M. Sprinzl:
Site-directed mutagenesis of thermus thermophilus elongation factor Tu. Replacement of His85, Asp81 and Arg300.
European Journal of Biochemistry 229, 596-604 (1995)

1994
Rodnina, M. V., R. Fricke and W. Wintermeyer:
Transient conformational states of aminoacyl-tRNA during ribosome binding catalyzed by elongation factor Tu.
Biochemistry 33, 12267-12275 (1994)
Rodnina, M. V., A. I. Serebryanik, G. V. Ovcharenko and A. V. El'skaya:
ATPase strongly bound to higher eukaryotic ribosomes.
European Journal of Biochemistry 225, 305-310 (1994)
Rodnina, M. V., Y. P. Semenkov and W. Wintermeyer:
Purification of fMET-tRNAfMET by fast protein liquid chromatography.
Analytical Biochemistry 219, 380-381 (1994)

1993
Rodnina, M. V., R. Fricke and W. Wintermeyer: Kinetic fluorescence studies on EF-Tu-dependent binding of Phe-tRNAPhe to the ribosomal A site. In: The translational apparatus: structure, function, regulation, evolution , (Eds.) Nierhaus, K. H.; Franceschi, F.; Subramanian, A. R.; Erdmann, V. A.; Wittmann-Liebold, B. Plenum Pr., New York (1993) 317-326

1992
Rodnina, M. V. and W. Wintermeyer:
Two tRNA-binding sites in addition to A and P sites on eukaryotic ribosomes.
Journal of Molecular Biology 228, 450-459 (1992)




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