Publications | Max Planck Institute for Multidisciplinary Sciences

Max Planck Institute for Multidisciplinary Sciences

Journal Article (444)

101.

Journal Article

Schneider, C.; Agafonov, D. E.; Schmitzova, J.; Hartmuth, K.; Fabrizio, P.; Lührmann, R.: Dynamic contacts of U2, RES, Cwc25, Prp8 and Prp45 proteins with the Pre-mRNA branch-site and 3' splice site during catalytic activation and step 1 catalysis in yeast spliceosomes. PLoS Genetics 11 (9), e1005539 (2015)

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102.

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Linser, R.; Salvi, N.; Briones, R.; Rovo, P.; de Groot, B. L.; Wagner, G.: The membrane anchor of the transcriptional activator SREBP is characterized by intrinsic conformational flexibility. Proceedings of the National Academy of Sciences of the United States of America 112 (40), pp. 12390 - 12395 (2015)

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103.

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Mehta, A.; Mann, M.; Zhao, J. L.; Marinov, G. K.; Majumdar, D.; Garcia-Flores, Y.; Du, X. M.; Erikci, E.; Chowdhury, K.; Baltimore, D.: The microRNA-212/132 cluster regulates B cell development by targeting Sox4. Journal of Experimental Medicine 212 (10), pp. 1679 - 1692 (2015)

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104.

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Boesler, C.; Rigo, N.; Agafonov, D. E.; Kastner, B.; Urlaub, H.; Will, C. L.; Lührmann, R.: Stable tri-snRNP integration is accompanied by a major structural rearrangement of the spliceosome that is dependent on Prp8 interaction with the 5‘ splice site. RNA 21 (11), pp. 1993 - 2005 (2015)

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105.

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Ilgen, P.; Grotjohann, T.; Jans, D. C.; Kilisch, M.; Hell, S. W.; Jakobs, S.: RESOLFT nanoscopy of fixed cells using a Z-domain based fusion protein for labelling. PLoS One 10 (9), e0136233 (2015)

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106.

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Kierspel, T.; Wiese, J.; Mullins, T.; Robinson, J.; Aquila, A.; Barty, A.; Bean, R.; Boll, R.; Boutet, S.; Bucksbaum, P. H. et al.; Chapman, H. N.; Christensen, L.; Fry, A.; Hunter, M.; Koglin, J. E.; Liang, M.; Mariani, V.; Morgan, A.; Natan, A.; Petrovic, V.; Rolles, D.; Rudenko, A.; Schnorr, K.; Stapelfeldt, H.; Stern, S.; Thogersen, J.; Yoon, C. H.; Wang, F.; Trippel, S.; Küpper, J.: Strongly aligned gas-phase molecules at free-electron lasers. Journal of Physics B: Atomic, Molecular and Optical Physics 48 (20), 204002 (2015)

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107.

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Lazariev, A.; Balasubramanian, G.: A nitrogen-vacancy spin based molecular structure microscope using multiplexed projection reconstruction. Scientific Reports 5, 14130 (2015)

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108.

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Kolmakov, K.; Hebisch, E.; Wolfram, T.; Nordwig, L.; Wurm, C. A.; Ta, H.; Westphal, V.; Belov, V. N.; Hell, S. W.: Far-red emitting fluorescent dyes for optical nanoscopy: Fluorinated silicon–rhodamines (SiRF dyes) and phosphorylated oxazines. Chemistry-A European Journal 21 (38), pp. 13344 - 13356 (2015)

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109.

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Dihazi, G. H.; Jahn, O.; Tampe, B.; Zeisberg, M.; Müller, C.; Müller, G. A.; Dihazi, H.: Proteomic analysis of embryonic kidney development: Heterochromatin proteins as epigenetic regulators of nephrogenesis. Scientific Reports 5, 13951 (2015)

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110.

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Jaremko, L.; Jaremko, M.; Nowakowski, M.; Ejchart, A.: The quest for simplicity: Remarks on the free-approach models. Journal of Physical Chemistry B 119 (36), pp. 11978 - 11987 (2015)

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111.

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Liekhus-Schmaltz, C. E.; Tenney, I.; Osipov, T.; Sanchez-Gonzalez, A.; Berrah, N.; Boll, R.; Bomme, C.; Bostedt, C.; Bozek, J. D.; Carron, S. et al.; Coffee, R.; Devin, J.; Erk, B.; Ferguson, K. R.; Field, R. W.; Foucar, L.; Frasinski, L. J.; Glownia, J. M.; Gühr, M.; Kamalov, A.; Krzywinski, J.; Li, H.; Marangos, J. P.; Martinez, T. J.; McFarland, B. K.; Miyabe, S.; Murphy, B.; Natan, A.; Rolles, D.; Rudenko, A.; Siano, M.; Simpson, E. R.; Spector, L.; Swiggers, M.; Walke, D.; Wang, S.; Weber, T.; Bucksbaum, P. H.; Petrovic, V. S.: Ultrafast isomerization initiated by X-ray core ionization. Nature Communications 6, 8199 (2015)

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112.

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Dennerlein, S.; Oeljeklaus, S.; Jans, D. C.; Hellwig, C.; Bareth, B.; Jakobs, S.; Deckers, M.; Warscheid, B.; Rehling, P.: MITRAC7 defines a checkpoint during cytochrome c oxidase assembly. Cell Reports 12 (10), pp. 1644 - 1655 (2015)

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113.

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Kukat, C.; Davies, M. K.; Wurm, C. A.; Spåhr, H.; Bonekamp, A.; Kühl, I.; Joos, F.; Loguercio-Polosa, P.; Park, B.; Poss, V. et al.; Falkenberg, M.; Jakobs, S.; Kühlbrandt, W.; Larsson, N. G.: Cross-strand binding of TFAM to a single mtDNA molecule forms the mitochondrial nucleoid. Proceedings of the National Academy of Sciences of the United States of America 112 (36), pp. 11288 - 11293 (2015)

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114.

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Maus, F.; Sakry, D.; Binamé, F.; Karram, K.; Rajalingam, K.; Watts, C.; Heywood, R.; Krüger, R.; Stegmüller, J.; Werner, H. B. et al.; Nave, K.-A.: The NG2 proteoglycan protects oligodendrocyte precursor cells against oxidative stress via interaction with OMI/HtrA2. PLoS One 10 (9), e0137311 (2015)

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115.

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Badowska, D.; Brzózka, M. M.; Chowdhury, A.; Malzahn, D.; Rossner, M. J.: Data calibration and reduction allows to visualize behavioural profiles of psychosocial influences in mice towards clinical domains. European Archives of Psychiatry and Clinical Neuroscience 265, pp. 483 - 496 (2015)

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116.

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Benito, E.; Urbanke, H.; Ramachandran, B.; Barth, J.; Halder, R.; Awasthi, A.; Jain, G.; Capece, J. G.; Burkhardt, S.; Navarro-Sala, M. et al.; Nagarajan, S.; Schütz, A. L.; Johnsen, S. A.; Bonn, S.; Lührmann, R.; Dean, C.; Fischer, A.: HDAC inhibitor-dependent transcriptome and memory reinstatement in cognitive decline models. Journal of Clinical Investigation 125 (9), pp. 3572 - 3584 (2015)

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117.

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Bodet, O.; Goerke, S.; Behl, N. G. R.; Roeloffs, V. B.; Zaiss, M.; Bachert, P.: Amide proton transfer of carnosine in aqueous solution studied in vitro by WEX and CEST experiments. NMR in Biomedicine 28 (9), pp. 1097 - 1103 (2015)

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118.

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Chari, A.; Haselbach, D.; Kirves, J. M.; Ohmer, J.; Paknia, E.; Fischer, N.; Ganichkin, O.; Moller, V.; Frye, J. J.; Petzold, G. et al.; Jarvis, M.; Tietzel, M.; Grimm, C.; Peters, J. M.; Schulman, B. A.; Tittmann, K.; Markl, J.; Fischer, U.; Stark, H.: ProteoPlex: Stability optimization of macromolecular complexes by sparse-matrix screening of chemical space. Nature Methods 12 (9), pp. 859 - 865 (2015)

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119.

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Deeg, A. A.; Reiner, A. M.; Schmidt, F.; Schueder, F.; Ryazanov, S.; Ruf, V. C.; Giller, K.; Becker, S.; Leonov, A.; Griesinger, C. et al.; Giese, A.; Zinth, W.: Anle138b and related compounds are aggregation specific fluorescence markers and reveal high affinity binding to α-synuclein aggregates. Biochimica et Biophysica Acta-General Subjects 1850 (9), pp. 1884 - 1890 (2015)

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120.

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Diaz, S. A.; Malonoski, A. P.; Susumu, K.; Hofele, R. V.; Oh, E.; Medintz, I. L.: Probing the kinetics of quantum dot-based proteolytic sensors. Analytical and Bioanalytical Chemistry 407 (24), pp. 7307 - 7318 (2015)

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121.

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Hauer, F.; Gerle, C.; Fischer, N.; Oshima, A.; Shinzawa-Itoh, K.; Shimada, S.; Yokoyama, K.; Fujiyoshi, Y.; Stark, H.: GraDeR: Membrane protein complex preparation for single-particle cryo-EM. Structure 23 (9), pp. 1769 - 1775 (2015)

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122.

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Kim, D. I.; Kang, M.; Kim, S.; Lee, J.; Park, Y.; Chang, I.; Suh, B. C.: Molecular basis of the membrane interaction of the beta 2e subunit of voltage-gated Ca2+ channels. Biophysical Journal 109 (5), pp. 922 - 935 (2015)

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123.

Journal Article

Krebs, J.: The plethora of PMCA isoforms: Alternative splicing and differential expression. Biochimica et Biophysica Acta - Molecular Cell Research 1853 (9), pp. 2018 - 2024 (2015)

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124.

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Onila, I.; ten Brink, T.; Fredriksson, K.; Codutti, L.; Mazur, A.; Griesinger, C.; Carlomagno, T.; Exner, T. E.: On-the-fly integration of data from a spin-diffusion-based NMR experiment into protein–ligand docking. Journal of Chemical Information and Modeling 55 (9), pp. 1962 - 1972 (2015)

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125.

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Rahman, J.; Besser, S.; Schnell, C.; Eulenburg, V.; Hirrlinger, J.; Wojcik, S. M.; Hülsmann, S.: Genetic ablation of VIAAT in glycinergic neurons causes a severe respiratory phenotype and perinatal death. Brain Structure & Function 220, pp. 2835 - 2849 (2015)

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126.

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Schneider, J.; Zahn, J.; Maglione, M.; Sigrist, S. J.; Marquard, J.; Chojnacki, J.; Kräusslich, H. G.; Sahl, S. J.; Engelhardt, J.; Hell, S. W.: Ultrafast temporally stochastic STED nanoscopy of millisecond dynamics. Nature Methods 12 (9), pp. 827 - 830 (2015)

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127.

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Schweisfurth, M. A.; Frahm, J.; Schweizer, R.: Individual left-hand and right-hand intra-digit representations in human primary somatosensory cortex. European Journal of Neuroscience 42 (5), pp. 2155 - 2163 (2015)

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128.

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Shi, S.; Wagner, J.; Mitteregger-Kretzschmar, G.; Ryazanov, S.; Leonov, A.; Griesinger, C.; Giese, A.: Quantitative real-time quaking-induced conversion allows monitoring of disease-modifying therapy in the urine of prion-infected mice. Journal of Neuropathology and Experimental Neurology 74 (9), pp. 924 - 933 (2015)

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129.

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Trevisiol, A.; Nave, K.-A.: Brain energy metabolism: conserved functions of glycolytic glial cells. Cell Metabolism 22 (3), pp. 361 - 363 (2015)

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130.

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Vicidomini, G.; Ta, H.; Honigmann, A.; Müller, V.; Clausen, M. P.; Waithe, D.; Galiani, S.; Sezgin, E.; Diaspro, A.; Hell, S. W. et al.; Eggeling, C.: STED-FLCS: An advanced tool to reveal spatiotemporal heterogeneity of molecular membrane dynamics. Nano Letters 15 (9), pp. 5912 - 5918 (2015)

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131.

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Yin, Z.; Peters, H. B.; Hahn, U.; Agaker, M.; Hage, A.; Reininger, R.; Siewert, F.; Nordgren, J.; Viefhaus, J.; Techert, S.: A new compact soft x-ray spectrometer for resonant inelastic x-ray scattering studies at PETRA III. Review of Scientific Instruments 86 (9), 093109 (2015)

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132.

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Ferrari, E.; Allaria, E.; Buck, J.; De Ninno, G.; Diviacco, B.; Gauthier, D.; Giannessi, L.; Glaser, L.; Huang, Z.; Ilchen, M. et al.; Lambert, G.; Lutman, A. A.; Mahieu, B.; Penco, G.; Spezzani, C.; Viefhaus, J.: Single shot polarization characterization of XUV FEL pulses from crossed polarized undulators. Scientific Reports 5, 13531 (2015)

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133.

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Kostrewa, D.; Kuhn, C. D.; Engel, C.; Cramer, P.: An alternative RNA polymerase I structure reveals a dimer hinge. Acta Crystallographica D 71 (9), pp. 1850 - 1855 (2015)

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134.

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Kadavath, H.; Jaremko, M.; Jaremko, L.; Biernat, J.; Mandelkow, E.; Zweckstetter, M.: Folding of the Tau protein on microtubules. Angewandte Chemie International Edition 54 (35), pp. 10347 - 10351 (2015)

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135.

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Wang, Y.; Arjonen, A.; Pouwels, J.; Ta, H.; Pausch, P.; Bange, G.; Engel, U.; Pan, X. Y.; Fackler, O. T.; Ivaska, J. et al.; Grosse, R.: Formin-like 2 promotes beta 1-integrin trafficking and invasive motility downstream of PKC alpha. Developmental Cell 34 (4), pp. 475 - 483 (2015)

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136.

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Steeves, A. H.; Park, B.; Bechtel, H. A.; Baraban, J. H.; Field, R. W.: Communication: Observation of local-bender eigenstates in acetylene. Journal of Chemical Physics 143 (7), 071101 (2015)

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137.

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Bock, L. V.; Blau, C.; Vaiana, A. C.; Grubmüller, H.: Dynamic contact network between ribosomal subunits enables rapid large-scale rotation during spontaneous translocation. Nucleic Acids Research 43 (14), pp. 6747 - 6760 (2015)

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138.

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Siebert, M.; Böhme, M. A.; Driller, J. H.; Babikir, H.; Mampell, M. M.; Rey, U.; Ramesh, N.; Matkovic, T.; Holton, N.; Reddy-Alla, S. et al.; Göttfert, F.; Kamin, D.; Quentin, C.; Klinedinst, S.; Andlauer, T. F.; Hell, S. W.; Collins, C. A.; Wahl, M. C.; Loll, B.; Sigrist, S. J.: A high affinity RIM-binding protein/Aplip1 interaction prevents the formation of ectopic axonal active zones. eLife 4, e06935 (2015)

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139.

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Ushakov, V. G.; Troe, J.; Johnson, R. S.; Guo, H.; Ard, S. G.; Melko, J. J.; Shuman, N. S.; Viggiano, A. A.: Statistical modeling of the reactions Fe(+) + N2O FeO(+) + N2 and FeO(+) + CO Fe(+) + CO2. Physical Chemistry Chemical Physics 17 (30), pp. 19700 - 19708 (2015)

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140.

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Ta, H.; Keller, J.; Haltmeier, M.; Saka, S. K.; Schmied, J.; Opazo, F.; Tinnefeld, P.; Munk, A.; Hell, S. W.: Mapping molecules in scanning far-field fluorescence nanoscopy. Nature Communications 6, 7977 (2015)

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141.

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Quinete, N.; Kraus, T.; Belov, V. N.; Aretz, C.; Esser, A.; Schettgen, T.: Fast determination of hydroxylated polychlorinated biphenyls in human plasma by online solid phase extraction coupled to liquid chromatography-tandem mass spectrometry. Analytica Chimica Acta 888, pp. 94 - 102 (2015)

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142.

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Munk, A.; Werner, F.: Discussion of “Hypotheses testing by convex optimization”. Electronic Journal of Statistics 9 (2), pp. 1720 - 1722 (2015)

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143.

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Truong, N. X.; Savoca, M.; Harding, D. J.; Fielicke, A.; Dopfer, O.: Vibrational spectra and structures of SinC clusters (n=3-8). Physical Chemistry Chemical Physics 17 (29), pp. 18961 - 18970 (2015)

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144.

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Zheng, K.; Zhu, Q.; Abdellah, M.; Messing, M. E.; Zhang, W.; Generalov, A.; Niu, Y.; Ribaud, L.; Canton, S. E.; Pullerits, T.: Exciton binding energy and the nature of emissive states in organometal halide perovskites. Journal of Physical Chemistry Letters 6 (15), pp. 2969 - 2975 (2015)

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145.

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Schwalbe, M.; Kadavath, H.; Biernat, J.; Ozenne, V.; Blackledge, M.; Mandelkow, E.; Zweckstetter, M.: Structural impact of Tau phosphorylation at threonine 231. Structure 23 (8), pp. 1448 - 1458 (2015)

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146.

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Ardenkjaer-Larsen, J. H.; Boebinger, G. S.; Comment, A.; Duckett, S.; Edison, A. S.; Engelke, F.; Griesinger, C.; Griffin, R. G.; Hilty, C.; Maeda, H. et al.; Parigi, G.; Prisner, T.; Ravera, E.; van Bentum, J.; Vega, S.; Webb, A.; Luchinat, C.; Schwalbe, H.; Frydman, L.: Facing and overcoming sensitivity challenges in biomolecular NMR spectroscopy. Angewandte Chemie-International Edition 54 (32), pp. 9162 - 9185 (2015)

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147.

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Li, D.; Wang, A.; Liu, X.; Meisgen, F.; Grünler, J.; Botusan, I. R.; Narayanan, S.; Erikci, E.; Li, X.; Blomqvist, L. et al.; Du, L.; Pivarcsi, A.; Sonkoly, E.; Chowdhury, K.; Catrina, S. B.; Stahle, M.; Landen, N. X.: MicroRNA-132 enhances transition from inflammation to proliferation during wound healing. Journal of Clinical Investigation 125 (8), pp. 3008 - 3026 (2015)

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148.

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Chinen, I.; Nakahama, T.; Kimura, A.; Nguyen, N. T.; Takemori, H.; Kumagai, A.; Kayama, H.; Takeda, K.; Lee, S.; Hanieh, H. et al.; Ripley, B.; Millrine, D.; Dubey, P. K.; Nyati, K. K.; Fujii-Kuriyama, Y.; Chowdhury, K.; Kishimoto, T.: The aryl hydrocarbon receptor/microRNA-212/132 axis in T cells regulates IL-10 production to maintain intestinal homeostasis. International Immunology 27 (8), pp. 405 - 415 (2015)

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149.

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Dibaj, P.; Schomburg, E. D.; Steffens, H.: Contractile characteristics of gastrocnemius-soleus muscle in the SOD1G93A ALS mouse model. Neurological Research 37 (8), pp. 693 - 702 (2015)

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Epplen, D. B.; Prukop, T.; Nientiedt, T.; Albrecht, P.; Arlt, F. A.; Stassart, R. M.; Kassmann, C. M.; Methner, A.; Nave, K.-A.; Werner, H. B. et al.; Sereda, M. W.: Curcumin therapy in a Plp1 transgenic mouse model of Pelizaeus-Merzbacher disease. Annals of Clinical and Translational Neurology 2 (8), pp. 787 - 796 (2015)

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