Max Planck Institute for Biophysical Chemistry

Publications

Journal Article (128)

1.

Journal Article

Zhang, Y.; Laurentiis, E. D.; Bohnsack, K. E.; Wahlig, M.; Ranjan, N.; Gruseck, S.; Hackert, P.; Wölfle, T.; Rodnina, M. V.; Schwappach, B. et al.; Rospert, S.: Ribosome-bound Get4/5 facilitates the capture of tail-anchored proteins by Sgt2 in yeast. Nature Communications 12, 782 (2021)

MPG.PuRe

publisher-version

2.

Journal Article

Samatova, E. N.; Daberger, J.; Liutkute, M.; Rodnina, M. V.: Translational control by ribosome pausing in bacteria: How a non-uniform pace of translation affects protein production and folding. Frontiers in Microbiology 11, 619430 (2021)

MPG.PuRe

publisher-version

3.

Journal Article

Lavdovskaia, E.; Denks, K.; Nadler, F.; Steube, E.; Linden, A.; Urlaub, H.; Rodnina, M. V.; Richter-Dennerlein, R.: Dual function of GTPBP6 in biogenesis and recycling of human mitochondrial ribosomes. Nucleic Acids Research 48 (22), pp. 12929 - 12942 (2020)

MPG.PuRe

publisher-version

4.

Journal Article

Liutkute, M.; Maiti, M.; Samatova, E. N.; Enderlein, J.; Rodnina, M. V.: Gradual compaction of nascent peptide during cotranslational folding on the ribosome. eLife 9, e60895 (2020)

MPG.PuRe

publisher-version

5.

Journal Article

Chan, K.-H.; Petrychenko, V.; Mueller, C.; Maracci, C.; Holtkamp, W.; Wilson, D. N.; Fischer, N.; Rodnina, M. V.: Mechanism of ribosome rescue by alternative ribosome-rescue factor B. Nature Communications 11, 4106 (2020)

MPG.PuRe

publisher-version

supplementary-material

6.

Journal Article

Mercier, E.; Wintermeyer, W.; Rodnina, M. V.: Co‐translational insertion and topogenesis of bacterial membrane proteins monitored in real time. EMBO Journal 39 (15), e104054 (2020)

MPG.PuRe

publisher-version

supplementary-material

7.

Journal Article

O'Loughlin, S.; Capece, M. C.; Klimova, M.; Wills, N. M.; Coakley, A.; Samatova, E. N.; O'Connor, P.k. B. F.; Loughran, G.; Weissman, J. S.; Baranov, P. V. et al.; Rodnina, M. V.; Puglisi, J.h. D.; Atkins, J. F.: Polysomes bypass a 50-nucleotide coding gap less efficiently than monosomes due to attenuation of a 5′ mRNA stem–loop and enhanced drop-off. Journal of Molecular Biology 432 (16), pp. 4369 - 4387 (2020)

MPG.PuRe

publisher-version

8.

Journal Article

Rodnina, M. V.; Korniy, N.; Klimova, M.; Karki, P.; Peng, B. Z.; Senyushkina, T.; Belardinelli, R.; Maracci, C.; Wohlgemuth, I.; Samatova, E. N. et al.; Peske, F.: Translational recoding: Canonical translation mechanisms reinterpreted. Nucleic Acids Research 48 (3), pp. 1056 - 1067 (2020)

MPG.PuRe

publisher-version

9.

Journal Article

Liutkute, M.; Samatova, E. N.; Rodnina, M. V.: Cotranslational folding of proteins on the ribosome. Biomolecules 10 (1), 97 (2020)

MPG.PuRe

publisher-version

10.

Journal Article

Peng, B. Z.; Bock, L. V.; Belardinelli, R.; Peske, F.; Grubmüller, H.; Rodnina, M. V.: Active role of elongation factor G in maintaining the mRNA reading frame during translation. Science Advances 5 (12), eaax8030 (2019)

MPG.PuRe

publisher-version

11.

Journal Article

Rodnina, M. V.; Peske, F.; Peng, B. Z.; Belardinelli, R.; Wintermeyer, W.: Converting GTP hydrolysis into motion: Versatile translational elongation factor G. Biological Chemistry 401 (1), pp. 131 - 142 (2019)

MPG.PuRe

12.

Journal Article

Bock, L. V.; Caliskan, N.; Korniy, N.; Peske, F.; Rodnina, M. V.; Grubmüller, H.: Thermodynamic control of −1 programmed ribosomal frameshifting. Nature Communications 10, 4598 (2019)

MPG.PuRe

publisher-version

supplementary-material

supplementary-material

supplementary-material

13.

Journal Article

Korniy, N.; Samatova, E. N.; Anokhina, M. M.; Peske, F.; Rodnina, M. V.: Mechanisms and biomedical implications of –1 programmed ribosome frameshifting on viral and bacterial mRNAs. FEBS Letters 593 (13), pp. 1468 - 1482 (2019)

MPG.PuRe

14.

Journal Article

Ranjan, N.; Leidel, S. A.: The epitranscriptome in translation regulation: mRNA and tRNA modifications as the two sides of the same coin? FEBS Letters 593 (13), pp. 1483 - 1493 (2019)

MPG.PuRe

publisher-version

15.

Journal Article

Klimova, M.; Senyushkina, T.; Samatova, E. N.; Peng, B. Z.; Pearson, M.; Peske, F.; Rodnina, M. V.: EF-G-induced ribosome sliding along the noncoding mRNA. Science Advances 5 (6), eaaw9049 (2019)

MPG.PuRe

publisher-version

16.

Journal Article

Korniy, N.; Goyal, A.; Hoffmann, M.; Samatova, E. N.; Peske, F.; Pöhlmann, S.; Rodnina, M. V.: Modulation of HIV-1 Gag/Gag-Pol frameshifting by tRNA abundance. Nucleic Acids Research 47 (10), pp. 5210 - 5222 (2019)

MPG.PuRe

publisher-version

supplementary-material

17.

Journal Article

Beissel , C.; Neumann, B.; Uhse, S.; Hampe , I.; Karki, P.; Krebber, H.: Translation termination depends on the sequential ribosomal entry of eRF1 and eRF3. Nucleic Acids Research 47 (9), pp. 4798 - 4813 (2019)

MPG.PuRe

publisher-version

supplementary-material

18.

Journal Article

Garofalo, R.; Wohlgemuth, I.; Pearson, M.; Lenz, C.; Urlaub, H.; Rodnina, M. V.: Broad range of missense error frequencies in cellular proteins. Nucleic Acids Research 47 (6), pp. 2932 - 2945 (2019)

MPG.PuRe

19.

Journal Article

Girodat, D.; Mercier, E.; Gzyl, K. E.; Wieden, H. J.: Elongation factor Tu's nucleotide binding is governed by a thermodynamic landscape unique among bacterial translation factors. Journal of the American Chemical Society 141 (26), pp. 10236 - 10246 (2019)

MPG.PuRe

supplementary-material

20.

Journal Article

Haase, N.; Holtkamp, W.; Lipowsky, R.; Rodnina, M. V.; Rudorf, S.: Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis. Nucleic Acids Research 46 (22), e130 (2018)

MPG.PuRe

publisher-version

supplementary-material

21.

Journal Article

Matsumoto, S.; Calsikan, N.; Rodnina, M. V.; Murata, A.; Nakatani, K.: Small synthetic molecule-stabilized RNA pseudoknot as an activator for -1 ribosomal frameshifting. Nucleic Acids Research 46 (16), pp. 8079 - 8089 (2018)

MPG.PuRe

publisher-version

22.

Journal Article

Zinoviev, A.; Goyal, A.; Jindal, S.; LaCava, J.; Komar, A. A.; Rodnina, M. V.; Hellen, C. U. T.; Pestova, T. V.: Functions of unconventional mammalian translational GTPases GTPBP1 and GTPBP2. Genes and Development 32 (17-18), pp. 1226 - 1241 (2018)

MPG.PuRe

publisher-version

supplementary-material

23.

Journal Article

Graf, M.; Huter, P.; Maracci, C.; Peterek, M.; Rodnina, M. V.; Wilson, D. N.: Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1. Nature Communications 9, 3053 (2018)

MPG.PuRe

publisher-version

24.

Journal Article

Draycheva, A.; Lee, S.; Wintermeyer, W.: Cotranslational protein targeting to the membrane: Nascent-chain transfer in a quaternary complex formed at the translocon. Scientific Reports 8 (1), 9922 (2018)

MPG.PuRe

publisher-version

25.

Journal Article

Mercier, E.; Rodnina, M. V.: Co-translational folding trajectory of the HemK helical domain. Biochemistry 57 (25), pp. 3460 - 3464 (2018)

MPG.PuRe

supplementary-material

26.

Journal Article

Adio, S.; Sharma, H.; Senyushkina, T.; Karki, P.; Maracci, C.; Wohlgemuth, I.; Holtkamp, W.; Peske, F.; Rodnina, M. V.: Dynamics of ribosomes and release factors during translation termination in E-coli. eLife 7, e34252 (2018)

MPG.PuRe

publisher-version

27.

Journal Article

Andreeva, I.; Belardinelli, R.; Rodnina, M. V.: Translation initiation in bacterial polysomes through ribosome loading on a standby site on a highly translated mRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (17), pp. 4411 - 4416 (2018)

MPG.PuRe

publisher-version

supplementary-material

28.

Journal Article

Rodnina, M. V.: Translation in prokaryotes. Cold Spring Harbor Perspectives in Biology 10 (9), a032664 (2018)

MPG.PuRe

publisher-version

29.

Journal Article

Blanchet, S.; Cornu, D.; Hatin, I.; Grosjean, H.; Bertin, P.; Namy, O.: Deciphering the reading of the genetic code by near-cognate tRNA. Proceedings of the National Academy of Sciences of the United States of America 115 (12), pp. 3018 - 3023 (2018)

MPG.PuRe

publisher-version

30.

Journal Article

Mercier, E.; Holtkamp, W.; Rodnina, M. V.; Wintermeyer, W.: Signal recognition particle binds to translating ribosomes before emergence of a signal anchor sequence. Nucleic Acids Research 45 (20), pp. 11858 - 11866 (2017)

MPG.PuRe

publisher-version

supplementary-material

31.

Journal Article

Huter, P.; Arenz, S.; Bock, L. V.; Graf, M.; Frister, J. O.; Heuer, A.; Peil, L.; Starosta, A. L.; Wohlgemuth, I.; Peske, F. et al.; Nováček, J.; Berninghausen, O.; Grubmüller, H.; Tenson, T.; Beckmann, R.; Rodnina, M. V.; Vaiana, A. C.; Wilson, D. N.: Structural basis for polyproline-mediated ribosome stalling and rescue by the translation elongation factor EF-P. Molecular Cell 68 (3), pp. 515 - 527 (2017)

MPG.PuRe

publisher-version

supplementary-material

32.

Journal Article

Goyal, A.; Belardinelli, R.; Rodnina, M. V.: Non-canonical binding site for bacterial initiation factor 3 on the large ribosomal subunit. Cell Reports 20 (13), pp. 3113 - 3122 (2017)

MPG.PuRe

publisher-version

supplementary-material

supplementary-material

33.

Journal Article

Belardinelli, R.; Rodnina, M. V.: Effect of fusidic acid on the kinetics of molecular motions during EF-G-induced translocation on the ribosome. Scientific Reports 7, 10536 (2017)

MPG.PuRe

publisher-version

34.

Journal Article

Florin, T.; Maracci, C.; Graf, M.; Karki, P.; Klepacki, D.; Berninghausen, O.; Beckmann, R.; Vazquez-Laslop, N.; Wilson, D. N.; Rodnina, M. V. et al.; Mankin, A. S.: An antimicrobial peptide that inhibits translation by trapping release factor trap. Nature Structural and Molecular Biology 24 (9), pp. 752 - 757 (2017)

MPG.PuRe

supplementary-material

supplementary-material

35.

Journal Article

Agirrezabala, X.; Samatova, E. N.; Klimova, M.; Zamora, M.; Gil-Carton, D.; Rodnina, M. V.; Valle, M.: Ribosome rearrangements at the onset of translational bypassing. Science Advances 3 (6), e1700147 (2017)

MPG.PuRe

publisher-version

36.

Journal Article

Caliskan, N.; Wohlgemuth, I.; Korniy, N.; Pearson, M.; Peske, F.; Rodnina, M. V.: Conditional switch between frameshifting regimes upon translation of dnaX mRNA. Molecular Cell 66 (4), pp. 558 - 567 (2017)

MPG.PuRe

supplementary-material

supplementary-material

37.

Journal Article

Ranjan, A.; Mercier, E.; Bhatt, A.; Wintermeyer, W.: Signal recognition particle prevents N-terminal processing of bacterial membrane proteins. Nature Communications 8, 15562 (2017)

MPG.PuRe

publisher-version

supplementary-material

38.

Journal Article

Ranjan, N.; Rodnina, M. V.: Thio-modification of tRNA at the wobble position as regulator of the kinetics of decoding and translocation on the ribosome. Journal of the American Chemical Society 139 (16), pp. 5857 - 5864 (2017)

MPG.PuRe

supplementary-material

39.

Journal Article

Rodnina, M. V.; Fischer, N.; Maracci, C.; Stark, H.: Ribosome dynamics during decoding. Philosophical Transactions of the Royal Society B 372 (1716), 20160182 (2017)

MPG.PuRe

publisher-version

40.

Journal Article

Thommen, M.; Holtkamp, W.; Rodnina, M. V.: Co-translational protein folding: Progress and methods. Current Opinion in Structural Biology 42, pp. 83 - 89 (2017)

MPG.PuRe

41.

Journal Article

Fischer, N.; Neumann, P.; Bock, l. V.; Maracci, C.; Wang, Z.; Paleskava, A.; Konevega, A. L.; Schröder, G. F.; Grubmüller, H.; Ficner, R. et al.; Rodnina, M. V.; Stark, H.: The pathway to GTPase activation of elongation factor SelB on the ribosome. Nature 540 (7631), pp. 80 - 85 (2016)

MPG.PuRe

publisher-version

42.

Journal Article

Haag, S.; Sloan, K. E.; Ranjan, N.; Warda, A. S.; Kretschmer, J.; Blessing, C.; Hübner, B.; Seikowski, J.; Dennerlein, S.; Rehling, P. et al.; Rodnina, M. V.; Höbartner, C.; Bohnsack, M. T.: NSUN3 and ABH1 modify the wobble position of mt-tRNAMet to expand codon recognition in mitochondrial translation. The EMBO Journal 35 (19), pp. 2104 - 2119 (2016)

MPG.PuRe

publisher-version

supplementary-material

supplementary-material

supplementary-material

43.

Journal Article

Draycheva, A.; Bornemann, T.; Ryazanov, S.; Lakomek, N. A.; Wintermeyer, W.: The bacterial SRP receptor, FtsY, is activated on binding to the translocon. Molecular Microbiology 102 (1), pp. 152 - 167 (2016)

MPG.PuRe

publisher-version

supplementary-material

44.

Journal Article

Sharma, H.; Adio, S.; Senyushkina, T.; Belardinelli, R.; Peske, F.; Rodnina, M. V.: Kinetics of spontaneous and EF-G-accelerated rotation of ribosomal subunits. Cell Reports 16 (8), pp. 2187 - 2196 (2016)

MPG.PuRe

publisher-version

supplementary-material

supplementary-material

45.

Journal Article

Lakomek, N. A.; Draycheva, A.; Bornemann, T.; Wintermeyer, W.: Electrostatics and intrinsic disorder drive translocon binding of the SRP receptor FtsY. Angewandte Chemie International Edition 55 (33), pp. 9544 - 9547 (2016)

MPG.PuRe

publisher-version

supplementary-material

46.

Journal Article

Maracci, C.; Rodnina, M. V.: Translational GTPases. Biopolymers 105 (8), pp. 463 - 475 (2016)

MPG.PuRe

publisher-version

47.

Journal Article

Rodnina, M. V.: The ribosome in action: Tuning of translational efficiency and protein folding. Protein Science 25 (8), pp. 1390 - 1406 (2016)

MPG.PuRe

48.

Journal Article

Katoh, T.; Wohlgemuth, I.; Nagano, M.; Rodnina, M. V.; Suga, H.: Essential structural elements in tRNAPro for EF-P-mediated alleviation of translation stalling. Nature Communications 7, 11657 (2016)

MPG.PuRe

publisher-version

supplementary-material

49.

Journal Article

Rodnina, M. V.; Wintermeyer, W.: Protein elongation, co-translational folding and targeting. Journal of Molecular Biology 428 (10, P. B), pp. 2165 - 2185 (2016)

MPG.PuRe

50.

Journal Article

Fabbretti, A.; Schedlbauer, A.; Brandi, L.; Kaminishi, T.; Giuliodori, A. M.; Garofalo, R.; Ochoa-Lizarralde, B.; Takemoto, C.; Yokoyama, S.; Connell, S. R. et al.; Gualerzi, C. O.; Fucini, P.: Inhibition of translation initiation complex formation by GE81112 unravels a 16S rRNA structural switch involved in P-site decoding. Proceedings of the National Academy of Sciences of the United States of America 113 (16), pp. E2286 - E2295 (2016)

MPG.PuRe

supplementary-material

51.

Journal Article

Belardinelli, R.; Sharma, H.; Caliskan, N.; da Cunha, C. E. L.; Peske, F.; Wintermeyer, W.; Rodnina, M. V.: Choreography of molecular movements during ribosome progression along mRNA. Nature Structural and Molecular Biology 23 (4), pp. 342 - 348 (2016)

MPG.PuRe

supplementary-material

52.

Journal Article

Buhr, F.; Jha, S.; Thommen, M.; Mittelstät, J.; Kutz, F.; Schwalbe, H.; Rodnina, M. V.; Komar, A. A.: Synonymous codons direct cotranslational folding toward different protein conformations. Molecular Cell 61 (3), pp. 341 - 351 (2016)

MPG.PuRe

supplementary-material

supplementary-material

53.

Journal Article

Ranjan, N.; Rodnina, M. V.: tRNA wobble modifications and protein homeostasis. Translation 4 (1), e1143076 (2016)

MPG.PuRe

54.

Journal Article

Belardinelli, R.; Sharma, H.; Peske, F.; Wintermeyer, W.; Rodnina, M. V.: Translocation as continuous movement through the ribosome. RNA Biology 13 (12), pp. 1197 - 1203 (2016)

MPG.PuRe

55.

Journal Article

Goyal, A.; Belardinelli, R.; Maracci, C.; Milon, P.; Rodnina, M. V.: Directional transition from initiation to elongation in bacterial translation. Nucleic Acids Research 43 (22), pp. 10700 - 10712 (2015)

MPG.PuRe

publisher-version

supplementary-material

56.

Journal Article

Druzhinin, S. I.; Galievsky, V. A.; Demeter, A.; Kovalenko, S. A.; Senyushkina, T.; Dubbaka, S. R.; Knoche, P.; Mayer, P.; Grosse, C.; Stalke, D. et al.; Zachariasse, K. A.: Two-state intramolecular charge transfer (ICT) with 3,5-dimethyl-4(dimethylamino)benzonitrile (MMD) and its meta-isomer mMMD. Ground state amino twist not essential for ICT. Journal of Physical Chemistry A 119 (49), pp. 11820 - 11836 (2015)

MPG.PuRe

supplementary-material

57.

Journal Article

Maracci, C.; Wohlgemuth, I.; Rodnina, M. V.: Activities of the peptidyl transferase center of ribosomes lacking protein L27. RNA 21 (12), pp. 2047 - 2052 (2015)

MPG.PuRe

publisher-version

58.

Journal Article

Holtkamp, W.; Kokic, G.; Jäger, M.; Mittelstät, J.; Komar, A.; Rodnina, M. V.: Cotranslational protein folding on the ribosome monitored in real time. Science 250 (6264), pp. 1104 - 1107 (2015)

MPG.PuRe

supplementary-material

59.

Journal Article

Dörfel, L. K.; Wohlgemuth, I.; Kubyshkin, V.; Starosta, A. L.; Wilson, D. N.; Budisa, N.; Rodnina, M. V.: Entropic contribution of elongation factor P to proline positioning at the catalytic center of the ribosome. Journal of the American Chemical Society 137 (40), pp. 12997 - 13006 (2015)

MPG.PuRe

supplementary-material

60.

Journal Article

Kuhn, P.; Draycheva, A.; Vogt, A.; Petriman, N. A.; Sturm, L.; Drepper, F.; Warscheid, B.; Wintermeyer, W.; Koch, H. G.: Ribosome binding induces repositioning of the signal recognition particle receptor on the translocon. Journal of Cell Biology 211 (1), pp. 91 - 104 (2015)

MPG.PuRe

publisher-version

supplementary-material

61.

Journal Article

Kotini, S. B.; Peske, F.; Rodnina, M. V.: Partitioning between recoding and termination at a stop codon-selenocysteine insertion sequence. Nucleic Acids Research 43 (13), pp. 6426 - 6438 (2015)

MPG.PuRe

publisher-version

62.

Journal Article

Adio, S.; Senyushkina, T.; Peske, F.; Fischer, N.; Wintermeyer, W.; Rodnina, M. V.: Fluctuations between multiple EF-G-induced chimeric tRNA states during translocation on the ribosome. Nature Communications 6, 7442 (2015)

MPG.PuRe

publisher-version

63.

Journal Article

Byrne, R. T.; Jenkins, H. T.; Peters, D. T.; Whelan, F.; Stowell, J.; Aziz, N.; Kasatzky, P.; Rodnina, M. V.; Koonin, E. V.; Konevega, A. L. et al.; Antson, A. A.: Major reorientation of tRNA substrates defines specificity of dihydrouridine synthases. Proceedings of the National Academy of Sciences of the United States of America 112 (19), pp. 6033 - 6037 (2015)

MPG.PuRe

publisher-version

supplementary-material

64.

Journal Article

Caliskan, N.; Peske, F.; Rodnina, M. V.: Changed in translation: mRNA recoding by −1 programmed ribosomal frameshifting. Trends in Biochemical Sciences 40 (5), pp. 265 - 274 (2015)

MPG.PuRe

65.

Journal Article

Fischer, N.; Neumann, P.; Konevega, A. L.; Bock, L. V.; Ficner, R.; Rodnina, M. V.; Stark, H.: Structure of the E. coli ribosome–EF-Tu complex at <3 Å resolution by Cs-corrected cryo-EM. Nature 520 (7548), pp. 567 - 570 (2015)

MPG.PuRe

publisher-version

66.

Journal Article

Wohlgemuth, I.; Lenz, C.; Urlaub, H.: Studying macromolecular complex stoichiometries by peptide-based mass spectrometry. Proteomics 15 (5-6), pp. 862 - 879 (2015)

MPG.PuRe

67.

Journal Article

Polikanov, Y. S.; Osterman, I. A.; Szal, T.; Tashlitsky, V. N.; Serebryakova, M. V.; Kusochek, P.; Bulkley, D.; Malanicheva, I. A.; Efimenko, T. A.; Efremenkova, O. V. et al.; Konevega, A. L.; Shaw, k.J.; Bogdanov, A. A.; Rodnina, M. V.; Dontsova, O. A.; Mankin, A. S.; Steitz, T. A.; Sergiev, P. V.: Amicoumacin a inhibits translation by stabilizing mRNA interaction with the ribosome. Molecular Cell 56 (4), pp. 531 - 540 (2014)

MPG.PuRe

68.

Journal Article

Rudorf, S.; Thommen, M.; Rodnina, M. V.; Lipowsky, R.: Deducing the kinetics of protein synthesis in vivo from the transition rates measured in vitro. PLoS Computational Biology 10 (10), e1003909 (2014)

MPG.PuRe

publisher-version

69.

Journal Article

Ge, Y.; Draycheva, A.; Bornemann, T.; Rodnina, M. V.; Wintermeyer, W.: Lateral opening of the bacterial translocon on ribosome binding and signal peptide insertion. Nature Communications 5, 5263 (2014)

MPG.PuRe

publisher-version

supplementary-material

70.

Journal Article

Maracci, C.; Peske, F.; Dannies, E.; Pohl, C.; Rodnina, M. V.: Ribosome-induced tuning of GTP hydrolysis by a translational GTPase. Proceedings of the National Academy of Sciences of the United States of America 111 (40), pp. 14418 - 14423 (2014)

MPG.PuRe

publisher-version

supplementary-material

71.

Journal Article

Holtkamp, W.; Wintermeyer, W.; Rodnina, M. V.: Synchronous tRNA movements during translocation on the ribosome are orchestrated by elongation factor G and GTP hydrolysis. BioEssays 36 (10), pp. 908 - 918 (2014)

MPG.PuRe

copyright-transfer-agreement

72.

Journal Article

Garreau de Loubresse, N.; Prokhorova, I.; Holtkamp, W.; Rodnina, M. V.; Yusupova , G.; Yusupov, M.: Structural basis for the inhibition of the eukaryotic ribosome. Nature 513 (7519), pp. 517 - 522 (2014)

MPG.PuRe

publisher-version

supplementary-material

73.

Journal Article

Samatova, E. N.; Konevega, A. L.; Wills, N. M.; Atkins, J. F.; Rodnina, M. V.: High-efficiency translational bypassing of non-coding nucleotides specified by mRNA structure and nascent peptide. Nature communications 5, 4459 (2014)

MPG.PuRe

publisher-version

supplementary-material

74.

Journal Article

Caliskan, N.; Katunin, V. I.; Belardinelli, R.; Peske, F.; Rodnina, M. V.: Programmed –1 frameshifting by kinetic partitioning during impeded translocation. Cell 157 (7), pp. 1619 - 1631 (2014)

MPG.PuRe

publisher-version

supplementary-material

supplementary-material

75.

Journal Article

Bornemann, T.; Holtkamp, W.; Wintermeyer, W.: Interplay between trigger factor and other protein biogenesis factors on the ribosome. Nature Communications 5, 4180 (2014)

MPG.PuRe

publisher-version

supplementary-material

76.

Journal Article

Holtkamp, W.; da Cunha, C. E. L.; Peske, F.; Konevega, A. L.; Wintermeyer, W.; Rodnina, M. V.: GTP hydrolysis by EF‐G synchronizes tRNA movement on small and large ribosomal subunits. EMBO Journal 33 (9), pp. 1073 - 1085 (2014)

MPG.PuRe

supplementary-material

supplementary-material

supplementary-material

publisher-version

77.

Journal Article

Peske, F.; Kuhlenkötter, S.; Rodnina, M. V.; Wintermeyer, W.: Timing of GTP binding and hydrolysis by translation termination factor RF3. Nucleic Acids Research 42 (3), pp. 1812 - 1820 (2014)

MPG.PuRe

publisher-version

78.

Journal Article

Bock, L. V.; Blau, C.; Schröder, G. F.; Davydov, I. I.; Fischer, N.; Stark, H.; Rodnina, M. V.; Vaiana, A. C.; Grubmüller, H.: Energy barriers and driving forces in tRNA translocation through the ribosome. Nature Structural and Molecular Biology 20 (12), pp. 1390 - 1396 (2013)

MPG.PuRe

publisher-version

supplementary-material

79.

Journal Article

Dörfel, L. K.; Rodnina, M. V.: Elongation factor P: Function and effects on bacterial fitness. Biopolymers 99 (11), pp. 837 - 845 (2013)

MPG.PuRe

publisher-version

80.

Journal Article

Mittelstät, J.; Konevega, A. L.; Rodnina, M. V.: A kinetic safety gate controlling the delivery of unnatural amino acids to the ribosome. Journal of the American Chemical Society 135 (45), pp. 17031 - 17038 (2013)

MPG.PuRe

publisher-version

supplementary-material

81.

Journal Article

Rodnina, M. V.: The ribosome as a versatile catalyst: Reactions at the peptidyl transferase center. Current Opinion in Structural Biology 23 (4), pp. 595 - 602 (2013)

MPG.PuRe

publisher-version

82.

Journal Article

Rezgui, V. A. N.; Kshitiz, T.; Namit, R.; Konevega, A. L.; Mittelstät, J.; Rodnina, M. V.; Peter, M.; Pedrioli, P. G. A.: tRNA tKUUU, tQUUG, and tEUUC wobble position modifications fine-tune protein translation by promoting ribosome A-site binding. Proceedings of the National Academy of Sciences of the United States of America 110 (30), pp. 12289 - 12294 (2013)

MPG.PuRe

publisher-version

supplementary-material

83.

Journal Article

Rodnina, M. V.: Translocation in action. Science 340 (6140), pp. 1534 - 1535 (2013)

MPG.PuRe

publisher-version

84.

Journal Article

da Cunha, C. E. L.; Belardinelli, R.; Peske, F.; Holtkamp, W.; Wintermeyer, W.; Rodnina, M. V.: Dual use of GTP hydrolysis by elongation factor G on the ribosome. Translation 1 (1), e24315 (2013)

MPG.PuRe

85.

Journal Article

Davydov, I.; Wohlgemuth, I.; Artamonova, I. I.; Urlaub, H.; Tonevitzky, A. G.; Rodnina, M. V.: Evolution of the protein stoichiometry in the L12 stalk of bacterial and organellar ribosomes. Nature Communications 4, 1387 (2013)

MPG.PuRe

publisher-version

supplementary-material

86.

Journal Article

Doerfel, L. K.; Wohlgemuth, I.; Kothe, C.; Peske, F.; Urlaub, H.; Rodnina, M. V.: EF-P is essential for rapid synthesis of proteins containing consecutive proline residues. Science 339 (6115), pp. 85 - 88 (2013)

MPG.PuRe

publisher-version

publisher-version

87.

Journal Article

Holtkamp, W.; Lee, S.; Bornemann, T.; Senyushkina, T.; Rodnina, M. V.; Wintermeyer, W.: Dynamic switch of the signal recognition particle from scanning to targeting. Nature Structural and Molecular Biology 19 (12), pp. 1332 - 1337 (2012)

MPG.PuRe

publisher-version

supplementary-material

88.

Journal Article

Khoshnevis, S.; Hauer, F.; Milon, P.; Stark, H.; Ficner, R.: Novel insights into the architecture and protein interaction network of yeast eIF3. RNA 18 (12), pp. 2306 - 2319 (2012)

MPG.PuRe

publisher-version

supplementary-material

89.

Journal Article

Paleskava, A.; Konevega, A. L.; Rodnina, M. V.: Thermodynamics of the GTP-GDP operated conformational switch of selenocysteine-specific translation factor SelB. Journal of Biological Chemistry 287 (33), pp. 27906 - 27912 (2012)

MPG.PuRe

publisher-version

90.

Journal Article

Milon, P.; Rodnina, M. V.: Kinetic control of translation initiation in bacteria. Critical Reviews in Biochemistry and Molecular Biology 47 (4), pp. 334 - 348 (2012)

MPG.PuRe

publisher-version

91.

Journal Article

Burakovsky, D. E.; Prokhorova, I. V.; Sergiev, P. V.; Milon, P.; Sergeeva, O. V.; Bogdanov, A. A.; Rodnina, M. V.; Dontsova, O. A.: Impact of methylations of m2G966/m5C967 in 16S rRNA on bacterial fitness and translation initiation. Nucleic Acids Research 40 (16), pp. 7885 - 7895 (2012)

MPG.PuRe

publisher-version

supplementary-material

92.

Journal Article

Cox, G.; Thompson, G. S.; Jenkins, H. T.; Peske, F.; Savelsbergh, A.; Rodnina, M. V.; Wintermeyer, W.; Homans, S. W.; Edwards, T. A.; O'Neill, A. J.: Ribosome clearance by FusB-type proteins mediates resistance to the antibiotic fusidic acid. Proceedings of the National Academy of Sciences of the United States of America 109 (6), pp. 2102 - 2107 (2012)

MPG.PuRe

publisher-version

93.

Journal Article

Milon, P.; Maracci, C.; Filonava, L.; Gualerzi, C. O.; Rodnina, M. V.: Real-time assembly landscape of bacterial 30S translation initiation complex. Nature Structural and Molecular Biology 19 (6), pp. 609 - 615 (2012)

MPG.PuRe

publisher-version

supplementary-material

94.

Journal Article

Tzivelekidis, T.; Jank, T.; Pohl, C.; Schlosser, A.; Rospert, S.; Knudsen, C. R.; Rodnina, M. V.; Belyi, Y.; Aktories, K.: Aminoacyl-tRNA-charged eukaryotic elongation factor 1A is the bona fide substrate for legionella pneumophila effector glucosyltransferases. PLoS One 6 (12), e29525 (2011)

MPG.PuRe

publisher-version

95.

Journal Article

Wohlgemuth, I.; Pohl, C.; Mittelstät, J.; Konevega, A. L.; Rodnina, M. V.: Evolutionary optimization of speed and accuracy of decoding on the ribosome. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 366 (1580), pp. 2979 - 2986 (2011)

MPG.PuRe

96.

Journal Article

Burakovsky, D. E.; Sergiev, P. V.; Steblyanko, M. A.; Konevega, A. L.; Bogdanov, A. A.; Dontsova, O. A.: The structure of helix 89 of 23S rRNA is important for peptidyl transferase function of Escherichia coli ribosome. FEBS Letters 585 (19), pp. 3073 - 3078 (2011)

MPG.PuRe

publisher-version

97.

Journal Article

Kuhlenkötter, S.; Wintermeyer, W.; Rodnina, M. V.: Different substrate-dependent transition states in the active site of the ribosome. Nature 476, pp. 351 - 354 (2011)

MPG.PuRe

publisher-version

publisher-version

98.

Journal Article

Julian, P.; Milon, P.; Agirrezabala, X.; Lasso, G.; Gil, D.; Rodnina, M. V.; Valle, M.: The cryo-EM structure of a complete 30S translation initiation complex from Escherichia coli. PLoS Biology 9 (7), e1001095 (2011)

MPG.PuRe

99.

Journal Article

Mittelstät, J.; Konevega, A. L.; Rodnina, M. V.: Distortion of tRNA upon near-cognate codon recognition on the ribosome. Journal of Biological Chemistry 286 (10), pp. 8158 - 8164 (2011)

MPG.PuRe

publisher-version