Journal Article (342)

100.
Journal Article
Lazzaretti, D.; Veith, K.; Kramer, K.; Basquin, C.; Urlaub, H.; Iron, U.; Bono, F.: The bicoid mRNA localization factor Exuperantia is an RNA-binding pseudonuclease. Nature Structural and Molecular Biology 23 (8), pp. 705 - 713 (2016)
101.
Journal Article
Gleditzsch, D.; Müller-Esparza, H.; Pausch, P.; Sharma, K.; Dwarakanath, S.; Urlaub, H.; Bange, G.; Randau, L.: Modulating the Cascade architecture of a minimal Type I-F CRISPR-Cas system. Nucleic Acids Research 44 (12), pp. 5872 - 5882 (2016)
102.
Journal Article
Seehusen, F.; Kiel, K.; Jottini, S.; Wohlsein, P.; Habierski, H.; Seibel, K.; Vogel, T.; Urlaub, H.; Kollmar, M.; Baumgärtner, W. et al.; Teichmann, U.: Axonopathy in the central nervous system is the hallmark of mice with a novel intragenic null mutation of dystonin. Genetics 204 (1), pp. 191 - 203 (2016)
103.
Journal Article
Boesler, C.; Rigo, N.; Anokhina, M. M.; Tauchert, M. J.; Agafonov, D. E.; Kastner, B.; Urlaub, H.; Ficner, R.; Will, C. L.; Lührmann, R.: A spliceosome intermediate with loosely associated tri-snRNP accumulates in the absence of Prp28 ATPase activity. Nature Communications 7, 11997 (2016)
104.
Journal Article
Mühlhausen, S.; Findeisen, P.; Plessmann, U.; Urlaub, H.; Kollmar, M.: A novel nuclear genetic code alteration in yeasts and the evolution of codon reassignment in eukaryotes. Genome Research 26 (7), pp. 945 - 955 (2016)
105.
Journal Article
Kühn, J.; Wong, L. E.; Pirkuliyeva, S.; Schulz, K.; Schwiegk, C.; Fünfgeld, K.; Keppler, S.; Batista, F. D.; Urlaub, H.; Habeck, M. et al.; Becker, S.; Griesinger, C.; Wienands, J.: The adaptor protein CIN85 assembles intracellular signaling clusters for B cell activation. Science Signaling 9 (434), ra66 (2016)
106.
Journal Article
Butkevich, E.; Hartig, W.; Nikolov, M.; Erck, C.; Grosche, J.; Urlaub, H.; Schmidt, C. F.; Klopfenstein, D. R.; Chua, J. J. E.: Phosphorylation of FEZ1 by microtubule affinity regulating kinases regulates its function in presynaptic protein trafficking. Scientific Reports 6, 26965 (2016)
107.
Journal Article
Bareth, B.; Nikolov, M.; Lorenzi, I.; Hildenbeutel, M.; Mick, D. U.; Helbig, C.; Urlaub, H.; Ott, M.; Rehling, P.; Dennerlein, S.: Oms1 associates with cytochrome c oxidase assembly intermediates to stabilize newly synthesized Cox1. Molecular Biology of the Cell 27 (10), pp. 1570 - 1580 (2016)
108.
Journal Article
Corso, J.; Pan, K. T.; Walter, R.; Doebele, C.; Mohr, S.; Bohnenberger, H.; Ströbel, P.; Lenz, C.; Slabicki, M.; Hüllein, J. et al.; Comoglio, F.; Rieger, M. A.; Zenz, T.; Wienands, J.; Engelke, M.; Serve, H.; Urlaub, H.; Oellerich, T.: Elucidation of tonic and activated B-cell receptor signaling in Burkitt's lymphoma provides insights into regulation of cell survival. Proceedings of the National Academy of Sciences of the United States of America 113 (20), pp. 5688 - 5693 (2016)
109.
Journal Article
Fourmann, J. B.; Dybkov, O.; Agafonov, D. E.; Tauchert, M. J.; Urlaub, H.; Ficner, R.; Fabrizio, P.; Lührmann, R.: The target of the DEAH-box NTP triphosphatase Prp43 in Saccharomyces cerevisiae spliceosomes is the U2 snRNP-intron interaction. eLife 5, e15564 (2016)
110.
Journal Article
Kohansalnodehi, M.; Chua, J. J.; Urlaub, H.; Jahn, R.; Czernik, D.: Analysis of protein phosphorylation in nerve terminal reveals extensive changes in active zone proteins upon exocytosis. eLife 5, e14530 (2016)
111.
Journal Article
Hiragami-Hamada, K.; Sörös, S.; Nikolov, M.; Wilkins, B.; Kreuz, S.; Chen, C.; De La Rosa-Velazquez, I. A.; Zenn, H. M.; Kost, N.; Pohl, W. et al.; Chernev, A.; Schwarzer, D.; Jenuwein, T.; Lorincz, M.; Zimmermann, B.; Walla, P. J.; Neumann, H.; Baubec, T.; Urlaub, H.; Fischle, W.: Dynamic and flexible H3K9me3 bridging via HP1beta dimerization establishes a plastic state of condensed chromatin. Nature Communications 7, 11310 (2016)
112.
Journal Article
Shao, Y. M.; Richter , H.; Sun, S.; Sharma, K.; Urlaub, H.; Randau, L.: A non-stem-loop CRISPR RNA is processed by dual binding Cas6. Structure 24 (4), pp. 547 - 554 (2016)
113.
Journal Article
Khan, N.; Lenz, C.; Binder, L.; Pantakani, D. V. K.; Asif, A. R.: Active and repressive chromatin-associated proteome after MPA treatment and the role of midkine in epithelial monolayer permeability. International Journal of Molecular Sciences 17 (4), 597 (2016)
114.
Journal Article
Agafonov, D. E.; Kastner, B.; Dybkov, O.; Hofele, R. V.; Liu, W.; Urlaub, H.; Lührmann, R.; Stark, H.: Molecular architecture of the human U4/U6.U5 tri-snRNP. Science 351 (6280), pp. 1416 - 1420 (2016)
115.
Journal Article
Heininger, A. U.; Hackert, P.; Andreou, A. Z.; Boon, K. L.; Memet, I.; Prior, M.; Clancy, A.; Schmidt, B.; Urlaub, H.; Schleiff, E. et al.; Sloan, K. E.; Deckers, M.; Lührmann, R.; Enderlein, J.; Klostermeier, D.; Rehling, P.; Bohnsack, M. T.: Protein cofactor competition regulates the action of a multifunctional RNA helicase in different pathways. RNA Biology 13 (3), pp. 320 - 330 (2016)
116.
Journal Article
Cicek, I. Ö.; Karaca, S.; Brankatschk, M.; Eaton, S.; Urlaub, H.; Shcherbata, H. R.: Hedgehog signaling strength is orchestrated by the mir-310 cluster of microRNAs in response to diet. Genetics 202 (3), pp. 1167 - 1183 (2016)
117.
Journal Article
Koch, H.; Raabe, M.; Urlaub, H.; Bindereif, A.; Preußer, C.: The polyadenylation complex of Trypanosoma brucei: Characterization of the functional poly(A) polymerase. RNA Biology 13 (2), pp. 221 - 231 (2016)
118.
Journal Article
Kirli, K.; Karaca, S.; Dehne, H. J.; Samwer, M.; Pan, K. T.; Lenz, C.; Urlaub, H.; Görlich, D.: A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. eLife 4, e11466 (2015)
119.
Journal Article
Absmeier, E.; Wollenhaupt, J.; Mozaffari-Jovin, S.; Becke, C.; Lee, C. T.; Preussner, M.; Heyd, F.; Urlaub, H.; Lührmann, R.; Santos, K. F. et al.; Wahl, M. C.: The large N-terminal region of the Brr2 RNA helicase guides productive spliceosome activation. Genes and Development 29 (24), pp. 2576 - 2587 (2015)
120.
Journal Article
Pleiner, T.; Bates, M.; Trakhanov, S.; Lee, C. T.; Schliep, J. E.; Chug, H.; Böhning, M.; Stark, H.; Urlaub, H.; Görlich, D.: Nanobodies: Site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation. eLife 4, e11349 (2015)
121.
Journal Article
Crisci, C.; Raleff, F.; Bagdul, I.; Raabe, M.; Urlaub, H.; Rain, J. C.; Krämer, A.: Mammalian splicing factor SF1 interacts with SURP domains of U2 snRNP-associated proteins. Nucleic Acids Research 43 (21), pp. 10456 - 10473 (2015)
122.
Journal Article
Zaman, U.; Richter, F. M.; Hofele, R. V.; Kramer, K.; Sachsenberg, T.; Kohlbacher, O.; Lenz, C.; Urlaub, H.: Dithiothreitol (DTT) acts as a specific, UV-inducible cross-linker in elucidation of protein-RNA interactions. Molecular and Cellular Proteomics 14 (12), pp. 3196 - 3210 (2015)
123.
Journal Article
Sharma, K.; Hrle, A.; Kramer, K.; Sachsenberg, T.; Staals, R. H. J.; Randau, L.; Marchfelder, A.; van der Oost, J.; Kohlbacher, O.; Conti, E. et al.; Urlaub, H.: Analysis of protein–RNA interactions in CRISPR proteins and effector complexes by UV-induced cross-linking and mass spectrometry. Methods 89, pp. 138 - 148 (2015)
124.
Journal Article
Port, S. A.; Monecke, T.; Dickmanns, A.; Spillner, C.; Hofele, R.; Urlaub, H.; Ficner, R.; Kehlenbach, H.: Structural and functional characterization of CRM1-Nup214 interactions reveals multiple FG-binding sites involved in nuclear export. Cell Reports 13 (4), pp. 690 - 702 (2015)
125.
Journal Article
Sakin, V.; Richter, S. M.; Hsiao, H. H.; Urlaub, H.; Melchior, F.: Sumoylation of the GTPase Ran by the RanBP2 SUMO E3 ligase complex. Journal of Biological Chemistry 290 (39), pp. 23598 - 23602 (2015)
126.
Journal Article
Boesler, C.; Rigo, N.; Agafonov, D. E.; Kastner, B.; Urlaub, H.; Will, C. L.; Lührmann, R.: Stable tri-snRNP integration is accompanied by a major structural rearrangement of the spliceosome that is dependent on Prp8 interaction with the 5‘ splice site. RNA 21 (11), pp. 1993 - 2005 (2015)
127.
Journal Article
Diaz, S. A.; Malonoski, A. P.; Susumu, K.; Hofele, R. V.; Oh, E.; Medintz, I. L.: Probing the kinetics of quantum dot-based proteolytic sensors. Analytical and Bioanalytical Chemistry 407 (24), pp. 7307 - 7318 (2015)
128.
Journal Article
Salat , D.; Winkler, A.; Urlaub, H.; Gessler, M.: Hey bHLH proteins interact with a FBXO45 containing SCF ubiquitin ligase complex and induce its translocation into the nucleus. PLOS One 10 (6), e0130288 (2015)
129.
Journal Article
Kuvardina, O. N.; Herglotz, J.; Kolodziej, S.; Kohrs, N.; Herkt, S.; Wojcik, B.; Oellerich, T.; Corso, J.; Behrens, K.; Kumar, A. et al.; Hussong, H.; Urlaub, H.; Koch, J.; Serve, H.; Bonig, H.; Stocking, C.; Rieger, M. A.; Lausen, J.: RUNX1 represses the erythroid gene expression program during megakaryocytic differentiation. Blood 125 (23), pp. 3570 - 3579 (2015)
130.
Journal Article
Kadavath, H.; Hofele, R. V.; Biernat, J.; Kumar, S.; Tepper, K.; Urlaub, H.; Mandelkow, E.; Zweckstetter, M.: Tau stabilizes microtubules by binding at the interface between tubulin heterodimers. Proceedings of the National Academy of Sciences of the United States of America 112 (24), pp. 7501 - 7506 (2015)
131.
Journal Article
Cass, S. D. B.; Haas, K. A.; Stoll, B.; Alkhnbashi, O. S.; Sharma, K.; Urlaub, H.; Backofen, R.; Marchfelder, A.; Bolt, E. L.: The role of Cas8 in type I CRISPR interference. Bioscience Reports 35 (3), e00197 (2015)
132.
Journal Article
Kost, N.; Kaiser, S.; Ostwal, Y.; Riedel, D.; Stützer, A.; Nikolov, M.; Rathke, C.; Renkawitz-Pohl, R.; Fischle, W.: Multimerization of Drosophila sperm protein Mst77F causes a unique condensed chromatin structure. Nucleic Acids Research 43 (6), pp. 3033 - 3045 (2015)
133.
Journal Article
Oellerich, T.; Mohr, S.; Corso, J.; Beck, J.; Döbele, C.; Braun, H.; Cremer, A.; Münch, S.; Wicht, J.; Oellerich, M. F. et al.; Bug, G.; Bohnenberger, H.; Perske, C.; Schütz, E.; Urlaub, H.; Serve, H.: FLT3-ITD and TLR9 use Bruton tyrosine kinase to activate distinct transcriptional programs mediating AML cell survival and proliferation. Blood 125 (12), pp. 1936 - 1947 (2015)
134.
Journal Article
Jorrin-Novo, J. V.; Pascual, J.; Sanchez-Lucas, R.; Romero-Rodriguez, M. C.; Rodriguez-Ortega, M. J.; Lenz, C.; Valledor, L.: Fourteen years of plant proteomics reflected in Proteomics: Moving from model species and 2DE-based approaches to orphan species and gel-free platforms. Proteomics 15 (5-6), pp. 1089 - 1112 (2015)
135.
Journal Article
Lin, T. Y.; Voronovsky, A.; Raabe, M.; Urlaub, H.; Sander, B.; Golas, M. M.: Dual tagging as an approach to isolate endogenous chromatin remodeling complexes from Saccharomyces cerevisiae. Biochimica et Biophysica Acta - Proteins and Proteomics 1854 (3), pp. 198 - 208 (2015)
136.
Journal Article
Timm, T.; Lenz, C.; Merkel, D.; Sadiffo, C.; Grabitzki, J.; Klein, J.; Lochnit, G.: Detection and site localization of phosphorylcholine-modified peptides by NanoLC-ESI-MS/MS using precursor ion scanning and multiple reaction monitoring experiments. Journal of the American Society of Mass Spectrometry 26 (3), pp. 460 - 471 (2015)
137.
Journal Article
Wohlgemuth, I.; Lenz, C.; Urlaub, H.: Studying macromolecular complex stoichiometries by peptide-based mass spectrometry. Proteomics 15 (5-6), pp. 862 - 879 (2015)
138.
Journal Article
Bohnenberger, H.; Ströbel, P.; Mohr, S.; Corso, J.; Berg, T.; Urlaub, H.; Lenz, C.; Serve, H.; Oellerich, T.: Quantitative mass spectrometric profiling of cancer-cell proteomes derived from liquid and solid tumors. Journal of Visualized Experiments 96, e52435 (2015)
139.
Journal Article
De, I.; Bessonov, S.; Hofele, R.; Dos Santos, K.; Will, C. L.; Urlaub, H.; Lührmann, R.; Pena, V.: The RNA helicase ​Aquarius exhibits structural adaptations mediating its recruitment to spliceosomes. Nature Structural and Molecular Biology 22 (2), pp. 138 - 144 (2015)
140.
Journal Article
Lugassy, J.; Corso, J.; Beach, D.; Petrik, T.; Oellerich, T.; Urlaub, H.; Yablonski, D.: Modulation of TCR responsiveness by the Grb2-family adaptor, Gads. Cellular Signalling 27 (1), pp. 125 - 134 (2015)
141.
Journal Article
Hrle, A.; Maier, L. K.; Sharma, K.; Ebert, J.; Basquin, C.; Urlaub, H.; Marchfelder, A.; Conti, E.: Structural analyses of the CRISPR protein Csc2 reveal the RNA-binding interface of the type I-D Cas7 family. RNA Biology 11 (8), pp. 1072 - 1082 (2014)
142.
Journal Article
Petrova, D. T.; Schultze, F. C.; Brandhorst, G.; Luchs, K. D.; Lenz, C.; Urlaub, H.; Rubel, D.; Gross, O.; Walson, P. D.; Oellerich, M.: Effects of mycophenolate mofetil on kidney function and phosphorylation status of renal proteins in Alport COL4A3-deficient mice. Proteome Science 12, 56 (2014)
143.
Journal Article
Staals, R. H.; Zhu, Y.; Taylor, D. W.; Kornfeld, J. E.; Sharma, K.; Barendregt, A.; Koehorst, J. F.; Vlot, M.; Neupane, N.; Varossieau, K. et al.; Sakamoto, K.; Suzuki, T.; Dohmae, N.; Yokoyama, S.; Schaap, P. J.; Urlaub, H.; Heck, A. J. R.; Nogales, E.; Doudna, J. A.; Shinkai, A.; van der Oost, J.: RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus. Molecular Cell 56 (4), pp. 518 - 530 (2014)
144.
Journal Article
Kramer, K.; Sachsenberg, T.; Beckmann, B. M.; Qamar, S.; Boon, K. L.; Hentze, M. W.; Kohlbacher, O.; Urlaub, H.: Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins. Nature Methods 11 (10), pp. 1064 - 1070 (2014)
145.
Journal Article
Lenz, C.; Urlaub, H.: Separation methodology to improve proteome coverage depth. Expert Review of Proteomics 11 (4), pp. 409 - 414 (2014)
146.
Journal Article
Moritz, B.; Lilie, H.; Naarmann-de Vries, I. S.; Urlaub, H.; Wahle, E.; Ostareck-Lederer, A.; Ostareck, D. H.: Biophysical and biochemical analysis of hnRNP K: Arginine methylation, reversible aggregation and combinatorial binding to nucleic acids. Biological Chemistry 395 (7-8), pp. 837 - 853 (2014)
147.
Journal Article
Wilhelm, B. G.; Mandad, S.; Truckenbrodt, S.; Kröhnert, K.; Schäfer, C.; Rammner, B.; Koo, S. J.; Classen, G. A.; Krauss, M.; Haucke, V. et al.; Urlaub, H.; Rizzoli, S. O.: Composition of isolated synaptic boutons reveals the amounts of vesicle trafficking proteins. Science 344 (6187), pp. 1023 - 1028 (2014)
148.
Journal Article
Vazquez-Pianzola, P.; Adam, J.; Haldemann, D.; Hain, D.; Urlaub, H.; Suter, B.: Clathrin heavy chain plays multiple roles in polarizing the Drosophila oocyte downstream of Bic-D. Development 141 (9), pp. 1915 - 1926 (2014)
149.
Journal Article
Loedige, I.; Stotz, M.; Qamar, S.; Kramer, K.; Hennig, J.; Schubert, T.; Löffler, P.; Längst, G.; Merkl, R.; Urlaub, H. et al.; Meister, G.: The NHL domain of BRAT is an RNA-binding domain that directly contacts the hunchback mRNA for regulation. Genes and Development 28 (7), pp. 749 - 764 (2014)
150.
Journal Article
Plagens, A.; Tripp, V.; Daume, M.; Sharma, K.; Klingl, A.; Hrle, A.; Conti, E.; Urlaub, H.; Randau, L.: In vitro assembly and activity of an archaeal CRISPR-Cas type I-A Cascade interference complex. Nucleic Acids Research 42 (8), pp. 5125 - 5138 (2014)
151.
Journal Article
Brendel, J.; Stoll, B.; Lange, S. J.; Sharma, K.; Lenz, C.; Stachler, A. E.; Maier, L. K.; Richter, H.; Nickel, L.; Schmitz, R. A. et al.; Randau, L.; Allers, T.; Urlaub, H.; Backofen, R.; Marchfelder, A.: A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-derived RNAs (crRNAs) in Haloferax volcanii. Journal of Biological Chemistry 289 (10), pp. 7164 - 7177 (2014)
152.
Journal Article
Schmidt, C.; Groenborg, M.; Deckert, J.; Bessonov, S.; Conrad, T.; Lührmann, R.; Urlaub, H.: Mass spectrometry–based relative quantification of proteins in precatalytic and catalytically active spliceosomes by metabolic labeling (SILAC), chemical labeling (iTRAQ), and label-free spectral count. RNA 20 (3), pp. 406 - 420 (2014)
153.
Journal Article
Biesemann, C.; Groenborg, M.; Luquet, E.; Wichert, S. P.; Bernard, V.; Bungers, S. R.; Cooper, B.; Varoqueaux, F.; Li, L.; Byrne, J. A. et al.; Urlaub, H.; Jahn, O.; Brose, N.; Herzog, E.: Proteomic screening of glutamatergic mouse brain synaptosomes isolated by fluorescence activated sorting. EMBO Journal 33 (2), pp. 157 - 170 (2014)
154.
Journal Article
Xiang, S. Q.; Gapsys, V.; Kim, H. Y.; Bessonov, S.; Hsiao, H. H.; Möhlmann, S.; Klaukien, V.; Ficner, R.; Becker, S.; Urlaub, H. et al.; Lührmann, R.; de Groot, B.; Zweckstetter, M.: Phosphorylation drives a dynamic switch in serine/arginine-rich proteins. Structure 21 (12), pp. 2162 - 2174 (2013)
155.
Journal Article
Engelke, M.; Oellerich, T.; Dittmann, K.; Hsiao, H. H.; Urlaub, H.; Serve, H.; Griesinger, C.; Wienands, J.: Cutting edge: Feed-forward activation of phospholipase C gamma 2 via C2 domain-mediated binding to SLP65. Journal of Immunology 191 (11), pp. 5354 - 5358 (2013)
156.
Journal Article
Pilla, E.; Kilisch, M.; Lenz, C.; Urlaub, H.; Geiss-Friedlander, R.: The SUMO1-E67 interacting loop peptide is an allosteric inhibitor of the dipeptidyl peptidases 8 and 9. Journal of Biological Chemistry 288 (45), pp. 32787 - 32796 (2013)
157.
Journal Article
Bhaskar, V.; Roudko, V.; Basquin, J.; Sharma, K.; Urlaub, H.; Seraphin, B.; Conti, E.: Structure and RNA-binding properties of the Not1-Not2Not5 module of the yeast Ccr4-Not complex. Nature Structrural and Molecular Biology 12 (20), pp. 1281 - 1288 (2013)
158.
Journal Article
Wirth, M.; Karaca, S.; Wenzel, D.; Ho, L.; Tishkoff, D.; Lombard, D. B.; Verdin, E.; Urlaub, H.; Jedrusik-Bode, M.; Fischle, W.: Mitochondrial SIRT4-type proteins in Caenorhabditis elegans and mammals interact with pyruvate carboxylase and other acetylated biotin-dependent carboxylases. Mitochondrion 13 (6), pp. 705 - 720 (2013)
159.
Journal Article
Christian, H.; Hofele, R. V.; Urlaub, H.; Ficner, R.: Insights into the activation of the helicase Prp43 by biochemical studies and structural mass spectrometry. Nucleic Acids Research 42 (2), pp. 1162 - 1179 (2013)
160.
Journal Article
Atanassov., I.; Urlaub, H.: Increased proteome coverage by combining PAGE and peptide isoelectric focusing: Comparative study of gel-based separation approaches. Proteomics 13 (20), pp. 2947 - 2955 (2013)
161.
Journal Article
Bareth, B.; Dennerlein, S.; Mick, D. U.; Nikolov, M.; Urlaub, H.; Rehling, P.: The heme a synthase Cox15 associates with cytochrome c oxidase assembly intermediates during Cox1 maturation. Molecular and Cellular Biology 33 (20), pp. 4128 - 4137 (2013)
162.
Journal Article
Kotzerke, K.; Mempel, M.; Aung, T.; Wulf, G. G.; Urlaub, H.; Wenzel, D.; Schön, M. P.; Braun, A.: Immunostimulatory activity of murine keratinocyte-derived exosomes. Experimental Dermatology 22 (10), pp. 650 - 655 (2013)
163.
Journal Article
Krüger, J. M.; Favaro, P. D.; Liu, M.; Kitlinska, A.; Huang, X. J.; Raabe, M.; Akad, D. S.; Liu, Y.; Urlaub, H.; Dong, Y. et al.; Xu, W.; Schlüter, O. M.: Differential roles of postsynaptic density-93 isoforms in regulating synaptic transmission. Journal of Neuroscience 33 (39), pp. 15504 - 15517 (2013)
164.
Journal Article
Sharif, H.; Ozgur, S.; Sharma, K.; Basquin, C.; Urlaub, H.; Conti, E.: Structural analysis of the yeast Dhh1-Pat1 complex reveals how Dhh1 engages Pat1, Edc3 and RNA in mutually exclusive interactions. Nucleic Acids Research 41 (17), pp. 8377 - 8390 (2013)
165.
Journal Article
Shema-Yaacoby, E.; Nikolov, M.; Haj-Yahya, M.; Siman, P.; Allemand, E.; Yamaguchi, Y.; Muchardt, C.; Urlaub, H.; Brik, A.; Oren, M. et al.; Fischle, W.: Systematic identification of proteins binding to chromatin-embedded ubiquitylated H2B reveals recruitment of SWI/SNF to regulate transcription. Cell Reports 4 (3), pp. 601 - 608 (2013)
166.
Journal Article
Siman, P.; Karthikeyan, S. V.; Nikolov, M.; Fischle, W.; Brik, A.: Convergent chemical synthesis of histone H2B protein for the site-specific ubiquitination at Lys34. Angewandte Chemie-International Edition 52 (31), pp. 8059 - 8063 (2013)
167.
Journal Article
Grapp, M.; Wrede, A.; Schweizer, M.; Hüwel, S.; Galla, H.; Snaidero, N.; Simons, M.; Bückers, J.; Low, P. S.; Urlaub, H. et al.; Gärtner, J.; Steinfeld, R.: Choroid plexus transcytosis and exosome shuttling deliver folate into brain parenchyma. Nature Communications 4, 2123 (2013)
168.
Journal Article
Samwer, M.; Dehne, H. J.; Spira, F.; Kollmar, M.; Gerlich, D.; Urlaub, H.; Görlich, D.: The nuclear F-actin interactome of Xenopus oocytes reveals an actin-bundling kinesin that is essential for meiotic cytokinesis. EMBO Journal 32 (13), pp. 1886 - 1902 (2013)
169.
Journal Article
Wagner, J.; Ryazanov, S.; Leonov, A.; Levin, J.; Shi, S.; Schmidt, F.; Prix, C.; Pan-Montojo, F.; Bertsch, U.; Mitteregger-Kretzschmar, G. et al.; Geissen, M.; Eiden, M.; Leidel, F.; Hirschberger, T.; Deeg, A. A.; Krauth, J.; Zinth, W.; Tavan, P.; Pilger, J.; Zweckstetter, M.; Frank, T.; Baehr, M.; Weishaupt, J. H.; Uhr, M.; Urlaub, H.; Teichmann, U.; Samwer, M.; Bötzel, K.; Groschup, M.; Kretzschmar, H.; Griesinger, C.; Giese, A.: Anle138b: a novel oligomer modulator for disease-modifying therapy of neurodegenerative diseases such as prion and Parkinson's disease. Acta Neuropathologica 125 (6), pp. 795 - 813 (2013)
170.
Journal Article
Ahmed, S.; Wittenmayer, N.; Kremer, T.; Hoeber, J.; Akula, A. K.; Urlaub, H.; Islinger, M.; Kirsch, J.; Dean, C.; Dresbach, T.: Mover Is a homomeric phospho-proteinpPresent on synaptic vesicles. PLoS One 8 (5), e63474 (2013)
171.
Journal Article
Oellerich, T.; Oellerich , M. F.; Engelke, M.; Münch, S.; Mohr, S.; Nimz, M.; Hsiao, H. H.; Corso, J.; Zhang, J.; Bohnenberger, H. et al.; Berg, T.; Rieger, M. A.; Wienands, J.; Bug, G.; Brandts, C.; Urlaub, H.; Serve, H.: β2 integrin–derived signals induce cell survival and proliferation of AML blasts by activating a Syk/STAT signaling axis. Blood 121 (19), pp. 3889 - 3899 (2013)
172.
Journal Article
Lehmann, S.; Hoofnagle, A.; Hochstrasser, D.; Brede, C.; Glueckmann, M.; Cocho, J. A.; Ceglarek, U.; Lenz, C.; Vialaret, J.; Scherl, A. et al.; Hirtz, C.: Quantitative Clinical Chemistry Proteomics (qCCP) using mass spectrometry: general characteristics and application. Clinical Chemistry and Laboratory Medicine 51 (5), pp. 919 - 935 (2013)
173.
Journal Article
Schmidt, C.; Hesse, D.; Raabe, M.; Urlaub, H.; Jahn, O.: An automated in-gel digestion/iTRAQ-labeling workflow for robust quantification of gel-separated proteins. Proteomics 13 (9), pp. 1417 - 1422 (2013)
174.
Journal Article
Boyken, J.; Grønborg, M.; Riedel, D.; Urlaub, H.; Jahn, R.; Chua, J. J.: Molecular profiling of synaptic vesicle docking sites reveals novel proteins but few differences between glutamatergic and GABAergic synapses. Neuron 78 (2), pp. 285 - 297 (2013)
175.
Journal Article
Urlaub, H.; Corso, J.; Oellerich, T.; Serve, H.: Quantitative mass spectrometry: Elucidation of the transduction cascade triggered by B cell receptors. GIT Laboratory Journal Europe 17 (1-2), pp. 22 - 24 (2013)
176.
Journal Article
Becker , J.; Barysch, S. V.; Karaca, S.; Dittmer, C.; Hsiao, H. H.; Diaz , M. B.; Herzig, S.; Urlaub, H.; Melchior, F.: Detecting endogenous SUMO targets in mammalian cells and tissues. Nature Structural and Molecular Biology 20 (4), pp. 525 - 531 (2013)
177.
Journal Article
Naarman-de Vries, I. S.; Urlaub, H.; Ostareck, D. H.; Ostareck-Lederer, A.: Caspase-3 cleaves hnRNP K in erythroid differentiation. Cell Death and Disease 4 (3), e548 (2013)
178.
Journal Article
Thakar, K.; Karaca, S.; Port, S. A.; Urlaub, H.; Kehlenbach, R. H.: Identification of CRM1-dependent nuclear export cargos using quantitative mass spectrometry. Molecular and Cellular Proteomics 12, pp. 664 - 678 (2013)
179.
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de Vries, S.; Naamann-de Vries, I. S.; Urlaub, H.; Lue, H.; Bernhagen, J.; Ostareck, D. H.; Ostareck-Lederer, A.: Identification of DEAD-box RNA helicase 6 (DDX6) as a cellular modulator of vascular endothelial growth factor expression under hypoxia. Journal of Biological Chemistry 288 (8), pp. 5815 - 5827 (2013)
180.
Journal Article
Fourmann, J. B.; Schmitzova, J.; Christian, H.; Urlaub, H.; Ficner, R.; Boon, K. L.; Fabrizio, P.; Lührmann, R.: Dissection of the factor requirements for spliceosome disassembly and the elucidation of its dissociation products using a purified splicing system. Genes and Development 27 (4), pp. 413 - 428 (2013)
181.
Journal Article
Dihazi, H.; Bohrer, R.; Jahn, O.; Lenz, C.; Majcherczyk, A.; Schmidt, B.; Urlaub, H.; Valerius, O.; Asif, A. R.: Mass spectrometry imaging: Linking molecule profiles to tissue spatial distribution. Expert Review of Proteomics 10 (1), pp. 17 - 20 (2013)
182.
Journal Article
Skora, L.; Fonseca, L.; Hofele, R. V.; Riedel, D.; Giller, K.; Watzlawik, J.; Schulz-Schaeffer, W. J.; Urlaub, H.; Becker, S.; Zweckstetter, M.: Burial of the polymorphic residue 129 in amyloid fibrils of prion stop mutants. Journal of Biological Chemistry 288 (5), pp. 2994 - 3002 (2013)
183.
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Werner, A.; Disanza, A.; Reifenberger, N.; Habeck, G.; Becker, J.; Calabrese, M.; Urlaub, H.; Lorenz, H.; Schulman, B.; Scita, G. et al.; Melchior, F.: SCF (Fbxw5) mediates transient degradation of actin remodeller Eps8 to allow proper mitotic progression. Nature Cell Biology 15 (2), pp. 179 - 188 (2013)
184.
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Lösing, M.; Goldbeck, I.; Manno, B.; Oellerich, T.; Schnyder, T.; Bohnenberger, H.; Stork, B.; Urlaub, H.; Batista, F. D.; Wienands, J. et al.; Engelke, M.: The Dok-3/Grb2 protein signal module attenuates Lyn kinase-dependent activation of Syk kinase in B cell antigen receptor microclusters. Journal of Biological Chemistry 288 (4), pp. 2303 - 2313 (2013)
185.
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Labokha, A.; Gradmann, S.; Frey, S.; Hülsmann, B. B.; Urlaub, H.; Baldus, M.; Görlich, D.: Systematic analysis of barrier-forming FG hydrogels from Xenopus nuclear pore complexes. EMBO Journal 32 (2), pp. 204 - 218 (2013)
186.
Journal Article
Davydov, I.; Wohlgemuth, I.; Artamonova, I. I.; Urlaub, H.; Tonevitzky, A. G.; Rodnina, M. V.: Evolution of the protein stoichiometry in the L12 stalk of bacterial and organellar ribosomes. Nature Communications 4, 1387 (2013)
187.
Journal Article
Doerfel, L. K.; Wohlgemuth, I.; Kothe, C.; Peske, F.; Urlaub, H.; Rodnina, M. V.: EF-P is essential for rapid synthesis of proteins containing consecutive proline residues. Science 339 (6115), pp. 85 - 88 (2013)
188.
Journal Article
Nikolov, M.; Fischle, W.: Systematic analysis of histone modification readout. Molecular biosystems 9 (2), pp. 182 - 194 (2013)
189.
Journal Article
Batsukh, T.; Schulz, Y.; Wolf, S.; Rabe, T. I.; Oellerich, T.; Urlaub, H.; Schaefer , I. M.; Pauli, S.: Identification and characterization of FAM124B as a novel component of a CHD7 and CHD8 containing complex. PLoS One 7, 0052460 (2012)
190.
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Tirard, M.; Hsiao, H. H.; Nikolov, M.; Urlaub, H.; Melchior, F.; Brose, N.: In vivo localization and identification of SUMOylated proteins in the brain of His6-HA-SUMO1 knock-in mice. Proceedings of the National Academy of Sciences of the United States of America 109 (51), pp. 21122 - 21127 (2012)
191.
Journal Article
Mozaffari-Jovin, S.; Santos, K. F.; Hsiao, H. H.; Will, C. L.; Urlaub, H.; Wahl, M. C.; Lührmann, R.: The Prp8 RNase H-like domain inhibits Brr2-mediated U4/U6 snRNA unwinding by blocking Brr2 loading onto the U4 snRNA. Genes and Development 26 (23), pp. 2422 - 2434 (2012)
192.
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Sinigalia, E.; Alvisi, G.; Segré, C. V.; Mercorelli, B.; Muratore, G.; Winkler, M.; Hsiao, H. H.; Urlaub, H.; Ripalti, A.; Chiocca, S. et al.; Palù, G.; Loregian, A.: The Human Cytomegalovirus DNA Polymerase Processivity Factor UL44 Is Modified by SUMO in a DNA-Dependent Manner. PLoS One 7 (11), e49630 (2012)
193.
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Jaspers, M.; Nolde, K.; Behr, M.; Joo, S. H.; Plessmann, U.; Nikolov, M.; Urlaub, H.; Schuh, R.: The claudin megatrachea protein complex. Journal of Biological Chemistry 287 (44), pp. 36756 - 36765 (2012)
194.
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Himmel, S.; Zschiedrich, C. P.; Becker, S.; Hsiao, H. H.; Wolff, S.; Dietmaier, C.; Urlaub, H.; Lee, D.; Griesinger, C.; Stülke, J.: Determinants of iinteraction specificity of the Bacillus subtilis GlcT antitermination protein: Funktionality and phosphorylation specificity depend on the arrangement of the regulatory domains. Journal of Biological Chemistry 287 (33), pp. 27731 - 27742 (2012)
195.
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Girard, C.; Will, C. L.; Peng, J.; Makarov, E. M.; Kastner, B.; Lemm, I.; Urlaub, H.; Hartmuth, K.; Lührmann, R.: Retention of posttranscriptional spliceosomes in nuclear speckles until splicing completion. Nature communications 3, 994 (2012)
196.
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Emami-Nemini, A.; Gohla, A.; Urlaub, H.; Lohse, M. J.; Klenk, C.: The guanine nucleotide exchange factor Vav2 is a negative regulator of parathyroid hormone receptor/G(q) signaling. Molecular Pharmacology 82 (2), pp. 217 - 225 (2012)
197.
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Sterkel, M.; Oliveira, P. L.; Urlaub, H.; Hernandez-Martinez, S.; Rivera-Pomar, R.; Ons, S.: OKB, a novel family of brain-gut neuropeptides from insects. Insect Biochemistry and Molecular Biology 42 (7), pp. 466 - 473 (2012)
198.
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Lacoux, C.; Di Marino, D.; Boyl, P. P.; Zalfa, F.; Yan, B.; Ciotti, M. T.; Falconi, M.; Urlaub, H.; Achsel, T.; Mougin, A. et al.; Caizergues-Ferrer, M.; Baigni, C.: BC1-FMRP interaction is modulated by 2'-O-methylation: RNA-binding activity of the tudor domain and translational regulation at synapses. Nucleic Acids Research 40 (9), pp. 4086 - 4096 (2012)
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