Journal Article (325)

  1. Journal Article
    Koch, H.; Raabe, M.; Urlaub, H.; Bindereif, A.; Preußer, C.: The polyadenylation complex of Trypanosoma brucei: Characterization of the functional poly(A) polymerase. RNA Biology 13 (2), pp. 221 - 231 (2016)
  2. Journal Article
    Kirli, K.; Karaca, S.; Dehne, H. J.; Samwer, M.; Pan, K. T.; Lenz, C.; Urlaub, H.; Görlich, D.: A deep proteomics perspective on CRM1-mediated nuclear export and nucleocytoplasmic partitioning. eLife 4 (2015)
  3. Journal Article
    Absmeier, E.; Wollenhaupt, J.; Mozaffari-Jovin, S.; Becke, C.; Lee, C. T.; Preussner, M.; Heyd, F.; Urlaub, H.; Lührmann, R.; Santos, K. F. et al.; Wahl, M. C.: The large N-terminal region of the Brr2 RNA helicase guides productive spliceosome activation. Genes and Development 29 (24), pp. 2576 - 2587 (2015)
  4. Journal Article
    Pleiner, T.; Bates, M.; Trakhanov, S.; Lee, C. T.; Schliep, J. E.; Chug, H.; Böhning, M.; Stark, H.; Urlaub, H.; Görlich, D.: Nanobodies: Site-specific labeling for super-resolution imaging, rapid epitope-mapping and native protein complex isolation. eLife 4 (2015)
  5. Journal Article
    Crisci, C.; Raleff, F.; Bagdul, I.; Raabe, M.; Urlaub, H.; Rain, J. C.; Krämer, A.: Mammalian splicing factor SF1 interacts with SURP domains of U2 snRNP-associated proteins. Nucleic Acids Research 43 (21), pp. 10456 - 10473 (2015)
  6. Journal Article
    Zaman, U.; Richter, F. M.; Hofele, R. V.; Kramer, K.; Sachsenberg, T.; Kohlbacher, O.; Lenz, C.; Urlaub, H.: Dithiothreitol (DTT) acts as a specific, UV-inducible cross-linker in elucidation of protein-RNA interactions. Molecular and Cellular Proteomics 14 (12), pp. 3196 - 3210 (2015)
  7. Journal Article
    Sharma, K.; Hrle, A.; Kramer, K.; Sachsenberg, T.; Staals, R. H. J.; Randau, L.; Marchfelder, A.; van der Oost, J.; Kohlbacher, O.; Conti, E. et al.; Urlaub, H.: Analysis of protein–RNA interactions in CRISPR proteins and effector complexes by UV-induced cross-linking and mass spectrometry. Methods 89, pp. 138 - 148 (2015)
  8. Journal Article
    Port, S. A.; Monecke, T.; Dickmanns, A.; Spillner, C.; Hofele, R.; Urlaub, H.; Ficner, R.; Kehlenbach, H.: Structural and functional characterization of CRM1-Nup214 interactions reveals multiple FG-binding sites involved in nuclear export. Cell Reports 13 (4), pp. 690 - 702 (2015)
  9. Journal Article
    Sakin, V.; Richter, S. M.; Hsiao, H. H.; Urlaub, H.; Melchior, F.: Sumoylation of the GTPase Ran by the RanBP2 SUMO E3 ligase complex. Journal of Biological Chemistry 290 (39), pp. 23598 - 23602 (2015)
  10. Journal Article
    Boesler, C.; Rigo, N.; Agafonov, D. E.; Kastner, B.; Urlaub, H.; Will, C. L.; Lührmann, R.: Stable tri-snRNP integration is accompanied by a major structural rearrangement of the spliceosome that is dependent on Prp8 interaction with the 5‘ splice site. RNA 21 (11) (2015)
  11. Journal Article
    Diaz, S. A.; Malonoski, A. P.; Susumu, K.; Hofele, R. V.; Oh, E.; Medintz, I. L.: Probing the kinetics of quantum dot-based proteolytic sensors. Analytical and Bioanalytical Chemistry 407 (24), pp. 7307 - 7318 (2015)
  12. Journal Article
    Salat , D.; Winkler, A.; Urlaub, H.; Gessler, M.: Hey bHLH proteins interact with a FBXO45 containing SCF ubiquitin ligase complex and induce its translocation into the nucleus. PLOS One 10 (6) (2015)
  13. Journal Article
    Kuvardina, O. N.; Herglotz, J.; Kolodziej, S.; Kohrs, N.; Herkt, S.; Wojcik, B.; Oellerich, T.; Corso, J.; Behrens, K.; Kumar, A. et al.; Hussong, H.; Urlaub, H.; Koch, J.; Serve, H.; Bonig, H.; Stocking, C.; Rieger, M. A.; Lausen, J.: RUNX1 represses the erythroid gene expression program during megakaryocytic differentiation. Blood 125 (23), pp. 3570 - 3579 (2015)
  14. Journal Article
    Kadavath, H.; Hofele, R. V.; Biernat, J.; Kumar, S.; Tepper, K.; Urlaub, H.; Mandelkow, E.; Zweckstetter, M.: Tau stabilizes microtubules by binding at the interface between tubulin heterodimers. Proceedings of the National Academy of Sciences of the United States of America 112 (24) (2015)
  15. Journal Article
    Cass, S. D. B.; Haas, K. A.; Stoll, B.; Alkhnbashi, O. S.; Sharma, K.; Urlaub, H.; Backofen, R.; Marchfelder, A.; Bolt, E. L.: The role of Cas8 in type I CRISPR interference. Bioscience Reports 35 (3) (2015)
  16. Journal Article
    Kost, N.; Kaiser, S.; Ostwal, Y.; Riedel, D.; Stützer, A.; Nikolov, M.; Rathke, C.; Renkawitz-Pohl, R.; Fischle, W.: Multimerization of Drosophila sperm protein Mst77F causes a unique condensed chromatin structure. Nucleic Acids Research 43 (6), pp. 3033 - 3045 (2015)
  17. Journal Article
    Oellerich, T.; Mohr, S.; Corso, J.; Beck, J.; Döbele, C.; Braun, H.; Cremer, A.; Münch, S.; Wicht, J.; Oellerich, M. F. et al.; Bug, G.; Bohnenberger, H.; Perske, C.; Schütz, E.; Urlaub, H.; Serve, H.: FLT3-ITD and TLR9 use Bruton tyrosine kinase to activate distinct transcriptional programs mediating AML cell survival and proliferation. Blood 125 (12), pp. 1936 - 1947 (2015)
  18. Journal Article
    Jorrin-Novo, J. V.; Pascual, J.; Sanchez-Lucas, R.; Romero-Rodriguez, M. C.; Rodriguez-Ortega, M. J.; Lenz, C.; Valledor, L.: Fourteen years of plant proteomics reflected in Proteomics: Moving from model species and 2DE-based approaches to orphan species and gel-free platforms. Proteomics 15 (5-6), pp. 1089 - 1112 (2015)
  19. Journal Article
    Lin, T. Y.; Voronovsky, A.; Raabe, M.; Urlaub, H.; Sander, B.; Golas, M. M.: Dual tagging as an approach to isolate endogenous chromatin remodeling complexes from Saccharomyces cerevisiae. Biochimica et Biophysica Acta - Proteins and Proteomics 1854 (3), pp. 198 - 208 (2015)
  20. Journal Article
    Timm, T.; Lenz, C.; Merkel, D.; Sadiffo, C.; Grabitzki, J.; Klein, J.; Lochnit, G.: Detection and site localization of phosphorylcholine-modified peptides by NanoLC-ESI-MS/MS using precursor ion scanning and multiple reaction monitoring experiments. Journal of the American Society of Mass Spectrometry 26 (3), pp. 460 - 471 (2015)
  21. Journal Article
    Wohlgemuth, I.; Lenz, C.; Urlaub, H.: Studying macromolecular complex stoichiometries by peptide-based mass spectrometry. Proteomics 15 (5-6), pp. 862 - 879 (2015)
  22. Journal Article
    Bohnenberger, H.; Ströbel, P.; Mohr, S.; Corso, J.; Berg, T.; Urlaub, H.; Lenz, C.; Serve, H.; Oellerich, T.: Quantitative mass spectrometric profiling of cancer-cell proteomes derived from liquid and solid tumors. Journal of Visualized Experiments 96 (2015)
  23. Journal Article
    De, I.; Bessonov, S.; Hofele, R.; Dos Santos, K.; Will, C. L.; Urlaub, H.; Lührmann, R.; Pena, V.: The RNA helicase ​Aquarius exhibits structural adaptations mediating its recruitment to spliceosomes. Nature Structural and Molecular Biology 22 (2) (2015)
  24. Journal Article
    Lugassy, J.; Corso, J.; Beach, D.; Petrik, T.; Oellerich, T.; Urlaub, H.; Yablonski, D.: Modulation of TCR responsiveness by the Grb2-family adaptor, Gads. Cellular Signalling 27 (1), pp. 125 - 134 (2015)
  25. Journal Article
    Hrle, A.; Maier, L. K.; Sharma, K.; Ebert, J.; Basquin, C.; Urlaub, H.; Marchfelder, A.; Conti, E.: Structural analyses of the CRISPR protein Csc2 reveal the RNA-binding interface of the type I-D Cas7 family. RNA Biology 11 (8) (2014)
  26. Journal Article
    Petrova, D. T.; Schultze, F. C.; Brandhorst, G.; Luchs, K. D.; Lenz, C.; Urlaub, H.; Rubel, D.; Gross, O.; Walson, P. D.; Oellerich, M.: Effects of mycophenolate mofetil on kidney function and phosphorylation status of renal proteins in Alport COL4A3-deficient mice. Proteome Science 12 (2014)
  27. Journal Article
    Staals, R. H.; Zhu, Y.; Taylor, D. W.; Kornfeld, J. E.; Sharma, K.; Barendregt, A.; Koehorst, J. F.; Vlot, M.; Neupane, N.; Varossieau, K. et al.; Sakamoto, K.; Suzuki, T.; Dohmae, N.; Yokoyama, S.; Schaap, P. J.; Urlaub, H.; Heck, A. J. R.; Nogales, E.; Doudna, J. A.; Shinkai, A.; van der Oost, J.: RNA targeting by the type III-A CRISPR-Cas Csm complex of Thermus thermophilus. Molecular Cell 56 (4), pp. 518 - 530 (2014)
  28. Journal Article
    Kramer, K.; Sachsenberg, T.; Beckmann, B. M.; Qamar, S.; Boon, K. L.; Hentze, M. W.; Kohlbacher, O.; Urlaub, H.: Photo-cross-linking and high-resolution mass spectrometry for assignment of RNA-binding sites in RNA-binding proteins. Nature Methods 11 (10), pp. 1064 - 1070 (2014)
  29. Journal Article
    Lenz, C.; Urlaub, H.: Separation methodology to improve proteome coverage depth. Expert Review of Proteomics 11 (4), pp. 409 - 414 (2014)
  30. Journal Article
    Moritz, B.; Lilie, H.; Naarmann-de Vries, I. S.; Urlaub, H.; Wahle, E.; Ostareck-Lederer, A.; Ostareck, D. H.: Biophysical and biochemical analysis of hnRNP K: Arginine methylation, reversible aggregation and combinatorial binding to nucleic acids. Biological Chemistry 395 (7-8), pp. 837 - 853 (2014)
  31. Journal Article
    Wilhelm, B. G.; Mandad, S.; Truckenbrodt, S.; Kröhnert, K.; Schäfer, C.; Rammner, B.; Koo, S. J.; Classen, G. A.; Krauss, M.; Haucke, V. et al.; Urlaub, H.; Rizzoli, S. O.: Composition of isolated synaptic boutons reveals the amounts of vesicle trafficking proteins. Science 344 (6187), pp. 1023 - 1028 (2014)
  32. Journal Article
    Vazquez-Pianzola, P.; Adam, J.; Haldemann, D.; Hain, D.; Urlaub, H.; Suter, B.: Clathrin heavy chain plays multiple roles in polarizing the Drosophila oocyte downstream of Bic-D. Development 141 (9), pp. 1915 - 1926 (2014)
  33. Journal Article
    Loedige, I.; Stotz, M.; Qamar, S.; Kramer, K.; Hennig, J.; Schubert, T.; Löffler, P.; Längst, G.; Merkl, R.; Urlaub, H. et al.; Meister, G.: The NHL domain of BRAT is an RNA-binding domain that directly contacts the hunchback mRNA for regulation. Genes and Development 28 (7), pp. 749 - 764 (2014)
  34. Journal Article
    Plagens, A.; Tripp, V.; Daume, M.; Sharma, K.; Klingl, A.; Hrle, A.; Conti, E.; Urlaub, H.; Randau, L.: In vitro assembly and activity of an archaeal CRISPR-Cas type I-A Cascade interference complex. Nucleic Acids Research 42 (8), pp. 5125 - 5138 (2014)
  35. Journal Article
    Brendel, J.; Stoll, B.; Lange, S. J.; Sharma, K.; Lenz, C.; Stachler, A. E.; Maier, L. K.; Richter, H.; Nickel, L.; Schmitz, R. A. et al.; Randau, L.; Allers, T.; Urlaub, H.; Backofen, R.; Marchfelder, A.: A complex of Cas proteins 5, 6, and 7 is required for the biogenesis and stability of Clustered Regularly Interspaced Short Palindromic Repeats (CRISPR)-derived RNAs (crRNAs) in Haloferax volcanii. Journal of Biological Chemistry 289 (10), pp. 7164 - 7177 (2014)
  36. Journal Article
    Schmidt, C.; Groenborg, M.; Deckert, J.; Bessonov, S.; Conrad, T.; Lührmann, R.; Urlaub, H.: Mass spectrometry–based relative quantification of proteins in precatalytic and catalytically active spliceosomes by metabolic labeling (SILAC), chemical labeling (iTRAQ), and label-free spectral count. RNA 20 (3), pp. 406 - 420 (2014)
  37. Journal Article
    Biesemann, C.; Groenborg, M.; Luquet, E.; Wichert, S. P.; Bernard, V.; Bungers, S. R.; Cooper, B.; Varoqueaux, F.; Li, L.; Byrne, J. A. et al.; Urlaub, H.; Jahn, O.; Brose, N.; Herzog, E.: Proteomic screening of glutamatergic mouse brain synaptosomes isolated by fluorescence activated sorting. EMBO Journal 33 (2), pp. 157 - 170 (2014)
  38. Journal Article
    Xiang, S. Q.; Gapsys, V.; Kim, H. Y.; Bessonov, S.; Hsiao, H. H.; Möhlmann, S.; Klaukien, V.; Ficner, R.; Becker, S.; Urlaub, H. et al.; Lührmann, R.; de Groot, B.; Zweckstetter, M.: Phosphorylation drives a dynamic switch in serine/arginine-rich proteins. Structure 21 (12), pp. 2162 - 2174 (2013)
  39. Journal Article
    Engelke, M.; Oellerich, T.; Dittmann, K.; Hsiao, H. H.; Urlaub, H.; Serve, H.; Griesinger, C.; Wienands, J.: Cutting edge: Feed-forward activation of phospholipase C gamma 2 via C2 domain-mediated binding to SLP65. Journal of Immunology 191 (11), pp. 5354 - 5358 (2013)
  40. Journal Article
    Pilla, E.; Kilisch, M.; Lenz, C.; Urlaub, H.; Geiss-Friedlander, R.: The SUMO1-E67 interacting loop peptide is an allosteric inhibitor of the dipeptidyl peptidases 8 and 9. Journal of Biological Chemistry 288 (45), pp. 32787 - 32796 (2013)
  41. Journal Article
    Bhaskar, V.; Roudko, V.; Basquin, J.; Sharma, K.; Urlaub, H.; Seraphin, B.; Conti, E.: Structure and RNA-binding properties of the Not1-Not2Not5 module of the yeast Ccr4-Not complex. Nature Structrural and Molecular Biology 12 (20), pp. 1281 - 1288 (2013)
  42. Journal Article
    Wirth, M.; Karaca, S.; Wenzel, D.; Ho, L.; Tishkoff, D.; Lombard, D. B.; Verdin, E.; Urlaub, H.; Jedrusik-Bode, M.; Fischle, W.: Mitochondrial SIRT4-type proteins in Caenorhabditis elegans and mammals interact with pyruvate carboxylase and other acetylated biotin-dependent carboxylases. Mitochondrion 13 (6), pp. 705 - 720 (2013)
  43. Journal Article
    Christian, H.; Hofele, R. V.; Urlaub, H.; Ficner, R.: Insights into the activation of the helicase Prp43 by biochemical studies and structural mass spectrometry. Nucleic Acids Research 42 (2) (2013)
  44. Journal Article
    Atanassov., I.; Urlaub, H.: Increased proteome coverage by combining PAGE and peptide isoelectric focusing: Comparative study of gel-based separation approaches. Proteomics 13 (20), pp. 2947 - 2955 (2013)
  45. Journal Article
    Bareth, B.; Dennerlein, S.; Mick, D. U.; Nikolov, M.; Urlaub, H.; Rehling, P.: The heme a synthase Cox15 associates with cytochrome c oxidase assembly intermediates during Cox1 maturation. Molecular and Cellular Biology 33 (20), pp. 4128 - 4137 (2013)
  46. Journal Article
    Kotzerke, K.; Mempel, M.; Aung, T.; Wulf, G. G.; Urlaub, H.; Wenzel, D.; Schön, M. P.; Braun, A.: Immunostimulatory activity of murine keratinocyte-derived exosomes. Experimental Dermatology 22 (10), pp. 650 - 655 (2013)
  47. Journal Article
    Krüger, J. M.; Favaro, P. D.; Liu, M.; Kitlinska, A.; Huang, X. J.; Raabe, M.; Akad, D. S.; Liu, Y.; Urlaub, H.; Dong, Y. et al.; Xu, W.; Schlüter, O. M.: Differential roles of postsynaptic density-93 isoforms in regulating synaptic transmission. Journal of Neuroscience 33 (39), pp. 15504 - 15517 (2013)
  48. Journal Article
    Sharif, H.; Ozgur, S.; Sharma, K.; Basquin, C.; Urlaub, H.; Conti, E.: Structural analysis of the yeast Dhh1-Pat1 complex reveals how Dhh1 engages Pat1, Edc3 and RNA in mutually exclusive interactions. Nucleic Acids Research 41 (17), pp. 8377 - 8390 (2013)
  49. Journal Article
    Shema-Yaacoby, E.; Nikolov, M.; Haj-Yahya, M.; Siman, P.; Allemand, E.; Yamaguchi, Y.; Muchardt, C.; Urlaub, H.; Brik, A.; Oren, M. et al.; Fischle, W.: Systematic identification of proteins binding to chromatin-embedded ubiquitylated H2B reveals recruitment of SWI/SNF to regulate transcription. Cell Reports 4 (3), pp. 601 - 608 (2013)
  50. Journal Article
    Siman, P.; Karthikeyan, S. V.; Nikolov, M.; Fischle, W.; Brik, A.: Convergent chemical synthesis of histone H2B protein for the site-specific ubiquitination at Lys34. Angewandte Chemie-International Edition 52 (31), pp. 8059 - 8063 (2013)
  51. Journal Article
    Grapp, M.; Wrede, A.; Schweizer, M.; Hüwel, S.; Galla, H.; Snaidero, N.; Simons, M.; Bückers, J.; Low, P. S.; Urlaub, H. et al.; Gärtner, J.; Steinfeld, R.: Choroid plexus transcytosis and exosome shuttling deliver folate into brain parenchyma. Nature Communications 4 (2013)
  52. Journal Article
    Samwer, M.; Dehne, H. J.; Spira, F.; Kollmar, M.; Gerlich, D.; Urlaub, H.; Görlich, D.: The nuclear F-actin interactome of Xenopus oocytes reveals an actin-bundling kinesin that is essential for meiotic cytokinesis. EMBO Journal 32 (13), pp. 1886 - 1902 (2013)
  53. Journal Article
    Wagner, J.; Ryazanov, S.; Leonov, A.; Levin, J.; Shi, S.; Schmidt, F.; Prix, C.; Pan-Montojo, F.; Bertsch, U.; Mitteregger-Kretzschmar, G. et al.; Geissen, M.; Eiden, M.; Leidel, F.; Hirschberger, T.; Deeg, A. A.; Krauth, J.; Zinth, W.; Tavan, P.; Pilger, J.; Zweckstetter, M.; Frank, T.; Baehr, M.; Weishaupt, J. H.; Uhr, M.; Urlaub, H.; Teichmann, U.; Samwer, M.; Bötzel, K.; Groschup, M.; Kretzschmar, H.; Griesinger, C.; Giese, A.: Anle138b: a novel oligomer modulator for disease-modifying therapy of neurodegenerative diseases such as prion and Parkinson's disease. Acta Neuropathologica 125 (6), pp. 795 - 813 (2013)
  54. Journal Article
    Ahmed, S.; Wittenmayer, N.; Kremer, T.; Hoeber, J.; Akula, A. K.; Urlaub, H.; Islinger, M.; Kirsch, J.; Dean, C.; Dresbach, T.: Mover Is a homomeric phospho-proteinpPresent on synaptic vesicles. PLoS One 8 (5) (2013)
  55. Journal Article
    Oellerich, T.; Oellerich , M. F.; Engelke, M.; Münch, S.; Mohr, S.; Nimz, M.; Hsiao, H. H.; Corso, J.; Zhang, J.; Bohnenberger, H. et al.; Berg, T.; Rieger, M. A.; Wienands, J.; Bug, G.; Brandts, C.; Urlaub, H.; Serve, H.: β2 integrin–derived signals induce cell survival and proliferation of AML blasts by activating a Syk/STAT signaling axis. Blood 121 (19), pp. 3889 - 3899 (2013)
  56. Journal Article
    Lehmann, S.; Hoofnagle, A.; Hochstrasser, D.; Brede, C.; Glueckmann, M.; Cocho, J. A.; Ceglarek, U.; Lenz, C.; Vialaret, J.; Scherl, A. et al.; Hirtz, C.: Quantitative Clinical Chemistry Proteomics (qCCP) using mass spectrometry: general characteristics and application. Clinical Chemistry and Laboratory Medicine 51 (5), pp. 919 - 935 (2013)
  57. Journal Article
    Schmidt, C.; Hesse, D.; Raabe, M.; Urlaub, H.; Jahn, O.: An automated in-gel digestion/iTRAQ-labeling workflow for robust quantification of gel-separated proteins. Proteomics 13 (9), pp. 1417 - 1422 (2013)
  58. Journal Article
    Boyken, J.; Grønborg, M.; Riedel, D.; Urlaub, H.; Jahn, R.; Chua, J. J.: Molecular profiling of synaptic vesicle docking sites reveals novel proteins but few differences between glutamatergic and GABAergic synapses. Neuron 78 (2), pp. 285 - 297 (2013)
  59. Journal Article
    Urlaub, H.; Corso, J.; Oellerich, T.; Serve, H.: Quantitative mass spectrometry: Elucidation of the transduction cascade triggered by B cell receptors. GIT Laboratory Journal Europe 17 (1-2) (2013)
  60. Journal Article
    Becker , J.; Barysch, S. V.; Karaca, S.; Dittmer, C.; Hsiao, H. H.; Diaz , M. B.; Herzig, S.; Urlaub, H.; Melchior, F.: Detecting endogenous SUMO targets in mammalian cells and tissues. Nature Structural and Molecular Biology 20 (4), pp. 525 - 531 (2013)
  61. Journal Article
    Naarman-de Vries, I. S.; Urlaub, H.; Ostareck, D. H.; Ostareck-Lederer, A.: Caspase-3 cleaves hnRNP K in erythroid differentiation. Cell Death and Disease 4 (3) (2013)
  62. Journal Article
    Thakar, K.; Karaca, S.; Port, S. A.; Urlaub, H.; Kehlenbach, R. H.: Identification of CRM1-dependent nuclear export cargos using quantitative mass spectrometry. Molecular and Cellular Proteomics 12, pp. 664 - 678 (2013)
  63. Journal Article
    de Vries, S.; Naamann-de Vries, I. S.; Urlaub, H.; Lue, H.; Bernhagen, J.; Ostareck, D. H.; Ostareck-Lederer, A.: Identification of DEAD-box RNA helicase 6 (DDX6) as a cellular modulator of vascular endothelial growth factor expression under hypoxia. Journal of Biological Chemistry 288 (8), pp. 5815 - 5827 (2013)
  64. Journal Article
    Fourmann, J. B.; Schmitzova, J.; Christian, H.; Urlaub, H.; Ficner, R.; Boon, K. L.; Fabrizio, P.; Lührmann, R.: Dissection of the factor requirements for spliceosome disassembly and the elucidation of its dissociation products using a purified splicing system. Genes and Development 27 (4) (2013)
  65. Journal Article
    Dihazi, H.; Bohrer, R.; Jahn, O.; Lenz, C.; Majcherczyk, A.; Schmidt, B.; Urlaub, H.; Valerius, O.; Asif, A. R.: Mass spectrometry imaging: Linking molecule profiles to tissue spatial distribution. Expert Review of Proteomics 10 (1), pp. 17 - 20 (2013)
  66. Journal Article
    Skora, L.; Fonseca, L.; Hofele, R. V.; Riedel, D.; Giller, K.; Watzlawik, J.; Schulz-Schaeffer, W. J.; Urlaub, H.; Becker, S.; Zweckstetter, M.: Burial of the polymorphic residue 129 in amyloid fibrils of prion stop mutants. Journal of Biological Chemistry 288 (5) (2013)
  67. Journal Article
    Werner, A.; Disanza, A.; Reifenberger, N.; Habeck, G.; Becker, J.; Calabrese, M.; Urlaub, H.; Lorenz, H.; Schulman, B.; Scita, G. et al.; Melchior, F.: SCF (Fbxw5) mediates transient degradation of actin remodeller Eps8 to allow proper mitotic progression. Nature Cell Biology 15 (2), pp. 179 - 188 (2013)
  68. Journal Article
    Lösing, M.; Goldbeck, I.; Manno, B.; Oellerich, T.; Schnyder, T.; Bohnenberger, H.; Stork, B.; Urlaub, H.; Batista, F. D.; Wienands, J. et al.; Engelke, M.: The Dok-3/Grb2 protein signal module attenuates Lyn kinase-dependent activation of Syk kinase in B cell antigen receptor microclusters. Journal of Biological Chemistry 288 (4), pp. 2303 - 2313 (2013)
  69. Journal Article
    Labokha, A.; Gradmann, S.; Frey, S.; Hülsmann, B. B.; Urlaub, H.; Baldus, M.; Görlich, D.: Systematic analysis of barrier-forming FG hydrogels from Xenopus nuclear pore complexes. EMBO Journal 32 (2), pp. 204 - 218 (2013)
  70. Journal Article
    Davydov, I.; Wohlgemuth, I.; Artamonova, I. I.; Urlaub, H.; Tonevitzky, A. G.; Rodnina, M. V.: Evolution of the protein stoichiometry in the L12 stalk of bacterial and organellar ribosomes. Nature Communications 4 (2013)
  71. Journal Article
    Doerfel, L. K.; Wohlgemuth, I.; Kothe, C.; Peske, F.; Urlaub, H.; Rodnina, M. V.: EF-P is essential for rapid synthesis of proteins containing consecutive proline residues. Science 339 (6115), pp. 85 - 88 (2013)
  72. Journal Article
    Nikolov, M.; Fischle, W.: Systematic analysis of histone modification readout. Molecular biosystems 9 (2), pp. 182 - 194 (2013)
  73. Journal Article
    Batsukh, T.; Schulz, Y.; Wolf, S.; Rabe, T. I.; Oellerich, T.; Urlaub, H.; Schaefer , I. M.; Pauli, S.: Identification and characterization of FAM124B as a novel component of a CHD7 and CHD8 containing complex. PLoS One 7 (2012)
  74. Journal Article
    Tirard, M.; Hsiao, H. H.; Nikolov, M.; Urlaub, H.; Melchior, F.; Brose, N.: In vivo localization and identification of SUMOylated proteins in the brain of His6-HA-SUMO1 knock-in mice. Proceedings of the National Academy of Sciences of the United States of America 109 (51), pp. 21122 - 21127 (2012)
  75. Journal Article
    Mozaffari-Jovin, S.; Santos, K. F.; Hsiao, H. H.; Will, C. L.; Urlaub, H.; Wahl, M. C.; Lührmann, R.: The Prp8 RNase H-like domain inhibits Brr2-mediated U4/U6 snRNA unwinding by blocking Brr2 loading onto the U4 snRNA. Genes and Development 26 (23), pp. 2422 - 2434 (2012)
  76. Journal Article
    Sinigalia, E.; Alvisi, G.; Segré, C. V.; Mercorelli, B.; Muratore, G.; Winkler, M.; Hsiao, H. H.; Urlaub, H.; Ripalti, A.; Chiocca, S. et al.; Palù, G.; Loregian, A.: The Human Cytomegalovirus DNA Polymerase Processivity Factor UL44 Is Modified by SUMO in a DNA-Dependent Manner. PLoS One 7 (11) (2012)
  77. Journal Article
    Jaspers, M.; Nolde, K.; Behr, M.; Joo, S. H.; Plessmann, U.; Nikolov, M.; Urlaub, H.; Schuh, R.: The claudin megatrachea protein complex. Journal of Biological Chemistry 287 (44) (2012)
  78. Journal Article
    Himmel, S.; Zschiedrich, C. P.; Becker, S.; Hsiao, H. H.; Wolff, S.; Dietmaier, C.; Urlaub, H.; Lee, D.; Griesinger, C.; Stülke, J.: Determinants of iinteraction specificity of the Bacillus subtilis GlcT antitermination protein: Funktionality and phosphorylation specificity depend on the arrangement of the regulatory domains. Journal of Biological Chemistry 287 (33), pp. 27731 - 27742 (2012)
  79. Journal Article
    Girard, C.; Will, C. L.; Peng, J.; Makarov, E. M.; Kastner, B.; Lemm, I.; Urlaub, H.; Hartmuth, K.; Lührmann, R.: Retention of posttranscriptional spliceosomes in nuclear speckles until splicing completion. Nature communications 3 (2012)
  80. Journal Article
    Emami-Nemini, A.; Gohla, A.; Urlaub, H.; Lohse, M. J.; Klenk, C.: The guanine nucleotide exchange factor Vav2 is a negative regulator of parathyroid hormone receptor/G(q) signaling. Molecular Pharmacology 82 (2), pp. 217 - 225 (2012)
  81. Journal Article
    Sterkel, M.; Oliveira, P. L.; Urlaub, H.; Hernandez-Martinez, S.; Rivera-Pomar, R.; Ons, S.: OKB, a novel family of brain-gut neuropeptides from insects. Insect Biochemistry and Molecular Biology 42 (7), pp. 466 - 473 (2012)
  82. Journal Article
    Lacoux, C.; Di Marino, D.; Boyl, P. P.; Zalfa, F.; Yan, B.; Ciotti, M. T.; Falconi, M.; Urlaub, H.; Achsel, T.; Mougin, A. et al.; Caizergues-Ferrer, M.; Baigni, C.: BC1-FMRP interaction is modulated by 2'-O-methylation: RNA-binding activity of the tudor domain and translational regulation at synapses. Nucleic Acids Research 40 (9), pp. 4086 - 4096 (2012)
  83. Journal Article
    Melero, R.; Buchwald, G.; Castano, R.; Raabe, M.; Gil, D.; Lazaro, M.; Urlaub, H.; Conti, E.; Llorca, O.: The cryo-EM structure of the UPF-EJC complex shows UPF1 poised toward the RNA 3 ' end. Nature Structural and Molecular Biology 19 (5), pp. 498 - 505 (2012)
  84. Journal Article
    Manrique-Hoyos, N.; Jürgens, T.; Gronborg, M.; Kreutzfeld, M.; Schedensack, M.; Kuhlmann, T.; Schrick, C.; Brück, W.; Urlaub, H.; Simons, M. et al.; Merkler, D.: Late motor decline after accomplished remyelination: Impact for progressive multiple sclerosis. Annals of Neurology 71 (2), pp. 227 - 244 (2012)
  85. Journal Article
    Strasser, D.; Neumann, K.; Bergmann, H.; Marakalala, M. J.; Gula, R.; Rojowska, A.; Hopfner, K. P.; Brombacher, F.; Urlaub, H.; Baier, G. et al.; Brown, G. D.; Leitges, M.; Ruland, J.: Syk kinase-coupled C-type lectin receptors engage protein kinase C-delta to elicit Card9 adaptor-mediated innate immunity. Immunity 36 (1), pp. 32 - 42 (2012)
  86. Journal Article
    Alkhaja, A. K.; Jans, D. C.; Nikolov, M.; Vukotic, M.; Lytovchenko, O.; Ludewig, F.; Schliebs, W.; Riedel, D.; Urlaub, H.; Jakobs, S. et al.; Deckers, M.: MINOS1 is a conserved component of mitofilin complexes and required for mitochondrial function and cristae organization. Molecular Biology of the Cell 23 (2), pp. 247 - 257 (2012)
  87. Journal Article
    Borsarelli, C. D.; Falomir Lockhart, L. J.; Ostatna, V.; Fauerbach, J. A.; Hsiao, H. H.; Urlaub, H.; Palecek, E.; Jares-Erijman, E. A.; Jovin, T.: Biophysical properties and cellular toxicity of covalent crosslinked oligomers of α-synuclein formed by photoinduced side-chain tyrosyl radicals. Free Radical Biology and Medicine 53 (4), pp. 1004 - 1015 (2012)
  88. Journal Article
    Hsiao, H. H.; Meulmeester, E.; Urlaub, H.: Identification of endogenous SUMO1 accepter sites by mass spectrometry. Quantitative methods in proteomics, pp. 431 - 441 (2012)
  89. Journal Article
    Hsiao, H. H.; Meulmeester, E.: Identification of endogenous SUMO1 accepter sites by mass spectrometry. Quantitative methods in proteomics, pp. 431 - 441 (2012)
  90. Journal Article
    Lemeer, S.; Kunold, E.; Klaeger, S.; Raabe, M.; Towers, M. W.; Claudes, E.; Arrey, T. N.; Strupat, K.; Urlaub, H.; Kuster, B.: Phosphorylation site localization in peptides by MALDI MS/MS and the Mascot Delta Score. Analytical and Bioanalytical Chemistry 402 (1), pp. 249 - 260 (2012)
  91. Journal Article
    Schmidt, C.; Kramer, K.; Urlaub, H.: Investigation of protein–RNA interactions by mass spectrometry: Techniques and applications. Journal of proteomics 75 (12), pp. 3478 - 3494 (2012)
  92. Journal Article
    Schmitzova, J.; Rasche, N.; Dybkov, O.; Kramer, K.; Fabrizio, P.; Urlaub, H.; Lührmann, R.; Pena, V.: Crystal structure of Cwc2 reveals a novel architecture of a multipartite RNA-binding protein. EMBO Journal 31 (9), pp. 2222 - 2234 (2012)
  93. Journal Article
    Schulz, S.; Chachami, G.; Kazaczkiewicz, L.; Winter, U.; Stankovic-Valentin, N.; Haas, P.; Hofmann, K.; Urlaub, H.; Ovaa, H.; Wittbrodt, J. et al.; Meulmeester, E.; Melchior, F.: Ubiquitin-specific protease-like 1 (USPL1) is a SUMO isopeptidase with essential, non-catalytic functions. EMBO Reports 13 (10), pp. 930 - 938 (2012)
  94. Journal Article
    Thorn, A.; Steinfeld, R.; Ziegenbein, M.; Grapp, M.; Hsiao, H. H.; Urlaub, H.; Sheldrick, G. M.; Gärtner, J.; Krätzner, R.: Structure and activity of the only human RNase T2. Nucleic Acids Research 40 (17), pp. 8733 - 8742 (2012)
  95. Journal Article
    Pidoux, G.; Witczak, O.; Jarnaess, E.; Myrvold, L.; Urlaub, H.; Stokka, A. J.; Kuntziger, T.; Tasken, K.: Optic atrophy 1 is an A-kinase anchoring protein on lipid droplets that mediates adrenergic control of lipolysis. EMBO Journal 30 (21), pp. 4371 - 4386 (2011)
  96. Journal Article
    Nikolov, M.; Stützer, A.; Mosch, K.; Krasauskas, A.; Soeroes, S.; Stark, H.; Urlaub, H.; Fischle, W.: Chromatin affinity purification and quantitative mass spectrometry defining the interactome of histone modification patterns. Molecular and Cellular Proteomics 10 (11), pp. 10.1074/mcp.M110.005371-1 - 10.1074/mcp.M110.005371–16 (2011)
  97. Journal Article
    Brakemann, T.; Stiel, A. C.; Weber, G.; Andresen, M.; Testa, I.; Grotjohann., T.; Leutenegger, M.; Plessmann, U.; Urlaub, H.; Eggeling, C. et al.; Wahl, M. C.; Hell, S. W.; Jakobs, S.: A reversibly photoswitchable GFP-like protein with fluorescence excitation decoupled from switching. Nature biotechnology 29 (10), pp. 942 - 947 (2011)
  98. Journal Article
    Vazquez-Pianzola, P.; Urlaub, H.; Suter, B.: Pabp binds to the osk 3'UTR and specifically contributes to osk mRNA stability and oocyte accumulation. Developmental Biology 357 (2), pp. 404 - 418 (2011)
  99. Journal Article
    Oellerich, T.; Bremes, V.; Neumann, K.; Bohnenberger, H.; Dittmann, K.; Hsiao, H. H.; Engelke, M.; Schnyder, T.; Batista, F. D.; Urlaub, H. et al.; Wienands, J.: The B-cell antigen receptor signals through a preformed transducer module of SLP65 and CIN85. EMBO Journal 30 (17), pp. 3620 - 3634 (2011)
Go to Editor View