Publikationen

Zeitschriftenartikel (297)

  1. 1.
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    Edeleva, E. V.; Shcherbata, H. R.: Stress-induced ECM alteration modulates cellular microRNAs that feedback to readjust the extracellular environment and cell behavior. Frontiers in Genetics 4, e305 (2013)
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    Kunnus, K.; Josefsson, I.; Schreck, S.; Quevedo, W.; Miedema, P. S.; Techert, S.; de Groot, F. M. F.; Odelius, M.; Wernet, P.; Föhlisch, A.: From ligand fields to molecular orbitals: Probing the local valence electronic structure of Ni2+ in aqueous solution with resonant inelastic X-ray scattering. Journal of Physical Chemistry B 117 (51), S. 16512 - 16521 (2013)
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    Loquet, A.; Habenstein, B.; Chevelkov, V.; Vasa, S. K.; Giller, K.; Becker, S.; Lange, A.: Atomic structure and handedness of the building block of a biological assembly. Journal of the American Chemical Society 135 (51), S. 19135 - 19138 (2013)
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    Arroyo Camejo, S.; Adam, M. P.; Besbes, M.; Hugonin, J. P.; Jaques, V.; Greffet, J. J.; Roch, J. F.; Hell, S. W.; Treussart, F.: Stimulated emission depletion microscopy resolves individual nitrogen vacancy centers in diamond nanocrystals. ACS Nano 7 (12), S. 10912 - 10919 (2013)
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    Schwalbe, M.; Biernat, J.; Bibow, S.; Ozenne, V.; Jensen, M. R.; Kadavath, H.; Blackledge, M.; Mandelkow, E.; Zweckstetter, M.: Phosphorylation of human Tau protein by microtubule affinity-regulating kinase 2. Biochemistry 52 (50), S. 9068 - 9079 (2013)
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    Pievo, R.; Angerstein, B.; Fielding, A. J.; Koch, C.; Feussner, I.; Bennati, M.: A rapid freeze-quench setup for multi-frequency EPR spectroscopy of enzymatic reactions. ChemPhysChem 14 (18), S. 4094 - 4101 (2013)
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    Schützenmeister, N.; Müller , M.; Reinscheid, U. M.; Griesinger, C.; Leonov, A.: Trapped in misbelief for almost 40 years: Selective synthesis of the four stereoisomers of mefloquine. Chemistry 19 (51), S. 17584 - 17588 (2013)
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    Kolmakov, K.; Wurm, C. A.; Meineke, D. N. H.; Göttfert, F.; Boyarskiy, V. P.; Belov, V. N.; Hell, S. W.: Polar red-emitting rhodamine dyes with reactive groups: Synthesis, photophysical properties, and two-color STED nanoscopy applications. Chemistry 20 (1) (2013)
  9. 9.
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    Smirnova, Y. G.; Aeffner, S.; Risselada, H. J.; Salditt, T.; Marrink, S. J.; Müller, M.; Knecht, V.: Interbilayer repulsion forces between tension-free lipid bilayers from simulation. Soft Matter 9 (45), S. 10705 - 10718 (2013)
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    Xiang, S. Q.; Gapsys, V.; Kim, H. Y.; Bessonov, S.; Hsiao, H. H.; Möhlmann, S.; Klaukien, V.; Ficner, R.; Becker, S.; Urlaub, H. et al.; Lührmann, R.; de Groot, B.; Zweckstetter, M.: Phosphorylation drives a dynamic switch in serine/arginine-rich proteins. Structure 21 (12), S. 2162 - 2174 (2013)
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    Engelhard, D. M.; Pievo, R.; Clever, G. H.: Reversible stabilization of transition-metal-binding DNA G-quadruplexes. Angewandte Chemie-International Edition 52 (49), S. 12843 - 12847 (2013)
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    Schill, H.; Nizamov, S.; Bottanelli, F.; Bierwagen, J.; Belov, V. N.; Hell, S. W.: 4-trifluoromethyl-substituted coumarins with large Stokes shifts: Synthesis, bioconjugates, and their use in super-resolution fluorescence microscopy. Chemistry 19 (49), S. 16556 - 16565 (2013)
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    Alvarez, Y. D.; Fauerbach, J. A.; Pellegrotti, J. V.; Jovin, T. M.; Jares-Erijman, E. A.; Stefani, F. D.: Influence of gold nanoparticles on the kinetics of α-synuclein aggregation. Nano Letters 13 (12), S. 6156 - 6163 (2013)
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    Blau, C.; Grubmüller, H.: g_contacts: Fast contact search in bio-molecular ensemble data. Computer Physics Communications 184 (12), S. 2856 - 2859 (2013)
  15. 15.
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    Bock, L. V.; Blau, C.; Schröder, G. F.; Davydov, I. I.; Fischer, N.; Stark, H.; Rodnina, M. V.; Vaiana, A. C.; Grubmüller, H.: Energy barriers and driving forces in tRNA translocation through the ribosome. Nature Structural and Molecular Biology 20 (12), S. 1390 - 1396 (2013)
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    Boll, R.; Anielski, D.; Bostedt, C.; Bozek, J. D.; Christensen, L.; Coffee, R.; De, S.; Decleva, P.; Epp, S. W.; Erk, B. et al.; Foucar, L.; Krasnigi, F.; Kupper, J.; Rouzee, A.; Rudek, B.; Rudenko, A.; Schorb, S.; Stapelfeldt, H.; Stener, M.; Stern, S.; Techert, S.; Trippel, S.; Vrakking, M. J. J.; Ullrich, J.; Rolles, D.: Femtosecond photoelectron diffraction on laser-aligned molecules: Towards time-resolved imaging of molecular structure. Physical Review A 88 (6), 061402 (2013)
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    Engelke, M.; Oellerich, T.; Dittmann, K.; Hsiao, H. H.; Urlaub, H.; Serve, H.; Griesinger, C.; Wienands, J.: Cutting edge: Feed-forward activation of phospholipase C gamma 2 via C2 domain-mediated binding to SLP65. Journal of Immunology 191 (11), S. 5354 - 5358 (2013)
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    Fielding, A.; Parey, K.; Ermler, U.; Scheller, S.; Jaun, B.; Bennati, M.: Advanced electron paramagnetic resonance on the catalytic iron–sulfur cluster bound to the CCG domain of heterodisulfide reductase and succinate: Quinone reductase. Journal of Biological Inorganic Chemistry 18 (8), S. 905 - 915 (2013)
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    Hotz, T.; Schuette, O. M.; Sieling, H.; Polupanow, T.; Diederichsen, U.; Steinem, C.; Munk, A.: Idealizing ion channel recordings by a jump segmentation multiresolution filter. IEEE Transactions on Nanobioscience 12 (4), S. 376 - 386 (2013)
  20. 20.
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    Karamitros, C. S.; Yashchenok, A. M.; Moehwald, H.; Skirtach, A. G.; Konrad, M.: Preserving catalytic activity and enhancing biochemical stability of the therapeutic enzyme asparaginase by biocompatible multi layered polyelectrolyte microcapsules. Biomacromolecules 14 (12), S. 4398 - 4406 (2013)
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    MPG.PuRe
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    Monzel, C.; Degreif-Dünnwald, P.; Gröpper, C.; Griesinger, C.; Unden, G.: The cytoplasmic PAS(C) domain of the sensor kinase DcuS of Escherichia coli: Role in signal transduction, dimer formation, and DctA interaction. Microbiologypen 2 (6), S. 912 - 927 (2013)
  22. 22.
    MPG.PuRe
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    Postupalenko, V. Y.; Zamotaiev, O. M.; Shvadchak, V. V.; Strizhak, A. V.; Pivovarenko, V. G.; Klymchenko, A. S.; Mely, Y.: Dual-fluorescence L-amino acid reports insertion and orientation of melittin peptide in cell membranes. Bioconjugate Chemistry 24 (12), S. 1998 - 2007 (2013)
  23. 23.
    MPG.PuRe
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    Watanabe, T.; Frahm, J.; Michaelis, T.: Cell layers and neuropil: Contrast-enhanced MRI of mouse brain in vivo. NMR in Biomedicine 26 (12), S. 1870 - 1878 (2013)
  24. 24.
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    Zaitsev, S. Y.; Shaposhnikov, M. N.; Solovyeva, D. O.; Zaitsev, I. S.; Möbius, D.: Novel precursors of fluorescent dyes. 1. Interaction of the dyes with model phospholipid in monolayers. Cell Biochemistry and Biophysics 67 (3), S. 1365 - 1370 (2013)
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    Fricke, P.; Demers, J. P.; Becker, S.; Lange, A.: Studies on the MxiH protein in T3SS needles using DNP-enhanced ssNMR spectroscopy. ChemPhysChem 15 (1) (2013)
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    Yu, S. R.; Su, S.; Dorenkamp, Y.; Wodtke, A. M.; Dai, D.; Yuan, K.; Yang, X.: Competition between direct and indirect dissociation pathways in ultraviolet photodissociation of HNCO. The Journal of Physical Chemistry A 117 (46), S. 11673 - 11678 (2013)
  27. 27.
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    Park, H. J.; Loh, N. D.; Sierra, R. G.; Hampton, C. Y.; Starodub, D.; Martin, A. V.; Barty, A.; Aquila, A. A.; Schulz, J.; Steinbrener, J. et al.; Shoeman, R. L.; Lomb, L.; Kassemeyer, S.; Bostedt, C.; Bozek, J.; Epp, S. W.; Erk, B.; Hartmann, R.; Rolles, D.; Rudenko, A.; Rudek, B.; Foucar, L.; Kimmel, N.; Weidenspointner, G.; Hauser, G.; Holl, P.; Pedersoli, E.; Liang, M.; Hunter, M. S.; Gumprecht, L.; Coppola, N.; Wunderer, C.; Graafsma, H.; Maia, F. R.; Ekeberg, T.; Hantke, M.; Fleckenstein, H.; Hirsemann, H.; Nass, K.; Tobias, H. J.; Farquar, G. R.; Benner, W. H.; Hau-Riege, S.; Reich, C.; Hartmann, A.; Soltau, H.; Marchesini, S.; Bajt, S.; Barthelmess, M.; Strueder, L.; Ullrich, J.; Bucksbaum, P.; Frank, M.; Schlichting, I.; Chapman, H. N.; Bogan, M. J.; Elser, V.: Towards unsupervised single-shot diffractive imaging of heterogeneous particles using X-ray free-electron. Optics Express 21 (23), S. 28729 - 28742 (2013)
  28. 28.
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    Turek, M.; Lewandrowski, I. L.; Bringmann, H.: An AP2 transcription factor is required for a sleep-active neuron to induce sleep-like quiescence in C. elegans. Current Biology 23 (22), S. 2215 - 2223 (2013)
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    Jedrusik-Bode, M. A.; Studencka, M.; Smolka, C.; Baumann, T.; Schmidt, H.; Kampf, J.; Paap, F.; Martin, S.; Tazi, J.; Müller, K. M. et al.; Krüger, M.; Braun, T.; Bober, E.: The sirtuin SIRT6 regulates stress granule formation in C. elegans and mammals. Journal of Cell Science 126, S. 5166 - 5177 (2013)
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    Nabavizadeh, M.; Sepehrpour, H.; Kia, R.; Rheingold, A. L.: Bis(diphenylphosphino)acetylene as bifunctional ligand in cycloplatinated complexes: Synthesis, characterization, crystal structures and mechanism of MeI oxidative addition. Journal of Organometallic Chemistry 745-746, S. 148 - 157 (2013)
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    Nabavizadeh, S. M.; Sepehrpour, H.; Kia, R.; Rheingold, A. L.: Bis(diphenylphosphino)-acetylene as bifunctional ligand in cycloplatinated complexes: Synthesis, characterization, crystal structures and mechanism of MeI oxidative addition. Journal of Organometallic Chemistry 745-746, S. 148 - 157 (2013)
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    Cobos, C. J.; Croce, A. E.; Luther, K.; Sölter, L.; Tellbach, E.; Troe, J.: Experimental and modeling study of the reaction C2F4 (+ M) CF2 + CF2 (+ M). The Journal of Physical Chemistry A 117 (45), S. 11420 - 11429 (2013)
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    Lim, J.; Vrignon, J.; Gruner, P.; Karamitros, C. S.; Konrad, M.; Baret, J. C.: Ultra-high throughput detection of single cell beta-galactosidase activity in droplets using micro-optical lens array. Applied Physics Letters 103 (20) (2013)
  34. 34.
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    Russo, L.; Maestre Martinez, M.; Wolff, S.; Becker, S.; Griesinger, C.: Interdomain dynamics explored by paramagnetic NMR. Journal of the American Chemical Society 135 (45), S. 17111 - 17120 (2013)
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    Pilla, E.; Kilisch, M.; Lenz, C.; Urlaub, H.; Geiss-Friedlander, R.: The SUMO1-E67 interacting loop peptide is an allosteric inhibitor of the dipeptidyl peptidases 8 and 9. Journal of Biological Chemistry 288 (45), S. 32787 - 32796 (2013)
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    Mitzner, R.; Rehanek, J.; Kern, J.; Gul, S.; Hattne, J.; Taguchi, T.; Alonso-Mori, R.; Tran, R.; Weniger, C.; Schröder, H. et al.; Quevedo, W.; Laksmono, H.; Sierra, R. G.; Han, G.; Lasalle-Kaiser, B.; Koroidov, S.; Kubicek, K.; Schreck, S.; Kunnus, K.; Brzhezinskaya, M.; Firsov, A.; Minitti, M. P.; Turner, J. J.; Moseller, S.; Sauter, N. K.; Bogan, M. J.; Nordlund, D.; Schlotter, W. F.; Messinger, J.; Borovik, A.; Techert, S.; de Groot, F. M. F.; Föhlisch, A.; Erko, A.; Bergmann, U.; Yachandra, V. K.; Wernet, P.; Yano, J.: L-edge X-ray absorption spectroscopy of dilute systems relevant to metalloproteins using an X-ray free-electron laser. The Journal of Physical Chemistry Letters 4 (21), S. 3641 - 3647 (2013)
  37. 37.
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    Pavanello, M.; Auerbach, D. J.; Wodtke, A. M.; Blanco-Rey, M.; Alducin, M.; Kroes, G. J.: Adiabatic energy loss in hyperthermal H atom collisions with Cu and Au: A basis for testing the importance of nonadiabatic energy loss. The Journal of Physical Chemistry Letters 4 (21), S. 3735 - 3740 (2013)
  38. 38.
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    Jaremko, M.; Jaremko, L.; Nowakowski, M.; Wojciechowski, M.; Szczepanowski, R. H.; Panecka, R.; Zhukov, I.; Bochtler, M.; Ejchart, A.: NMR structural studies of the first catalytic half-domain of ubiquitin activating enzyme. Journal of Structural Biology 185 (1) (2013)
  39. 39.
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    Solanko, L. M.; Honigmann, A.; Midtiby, H. S.; Lund, F. W.; Brewer, J. R.; Dekaris, V.; Bittman, R.; Eggeling, C.; Wüstner, D.: Membrane orientation and lateral diffusion of BODIPY-cholesterol as a function of probe structure. Biophysical Journal 105 (9), S. 2082 - 2092 (2013)
  40. 40.
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    Leliavski, A.; Shostak, A.; Husse, J. L.; Oster, H.: Impaired glucocorticoid production and response to stress in Arntl-deficient male mice. Endocrinology 155 (1) (2013)
  41. 41.
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    Bhaskar, V.; Roudko, V.; Basquin, J.; Sharma, K.; Urlaub, H.; Seraphin, B.; Conti, E.: Structure and RNA-binding properties of the Not1-Not2Not5 module of the yeast Ccr4-Not complex. Nature Structrural and Molecular Biology 12 (20), S. 1281 - 1288 (2013)
  42. 42.
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    Dörfel, L. K.; Rodnina, M. V.: Elongation factor P: Function and effects on bacterial fitness. Biopolymers 99 (11), S. 837 - 845 (2013)
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    Menck, K.; Klemm, F.; Gross, J. C.; Pukrop, T.; Wenzel, D.; Binder, C.: Induction and transport of Wnt 5a during macrophage-induced malignant invasion is mediated by two types of extracellular vesicles. Oncotarget 4 (11), S. 2057 - 2066 (2013)
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    Wirth, M.; Karaca, S.; Wenzel, D.; Ho, L.; Tishkoff, D.; Lombard, D. B.; Verdin, E.; Urlaub, H.; Jedrusik-Bode, M.; Fischle, W.: Mitochondrial SIRT4-type proteins in Caenorhabditis elegans and mammals interact with pyruvate carboxylase and other acetylated biotin-dependent carboxylases. Mitochondrion 13 (6), S. 705 - 720 (2013)
  45. 45.
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    Zinkevich, T.; Chevelkov, V.; Reif, B.; Saalwächter, K.; Krushelnitsky, A.: Internal protein dynamics on ps to mu s timescales as studied by multi-frequency N-15 solid-state NMR relaxation. Journal of Biomolecular NMR 57 (3), S. 219 - 235 (2013)
  46. 46.
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    Courtney, M.; Gjernes, E.; Druelle, N.; Ravaud, C.; Vieira, A.; Ben-Othman, N.; Pfeifer, A.; Avolio, F.; Leuckx, G.; Lacas-Gervais, S. et al.; Burel-Vandenbos, F.; Ambrosetti, D.; Hecksher-Sorensen, J.; Ravassard, P.; Heimberg, H.; Mansouri, A.; Collombat, P.: The inactivation of Arx in pancreatic alpha-cells triggers their neogenesis and conversion into functional beta-like cells. PLoS Genetics 9 (10) (2013)
  47. 47.
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    Anokhina, M.; Bessonov, S.; Miao, Z. C.; Westhof, E.; Hartmuth, K.; Lührmann, R.: RNA structure analysis of human spliceosomes reveals a compact 3D arrangement of snRNAs at the catalytic core. EMBO Journal 32 (21), S. 2804 - 2818 (2013)
  48. 48.
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    Bartels, N.; Golibrzuch, K.; Bartels, C.; Chen, L.; Auerbach, D. J.; Wodtke, A. M.; Schäfer, T.: Observation of orientation-dependent electron transfer in molecule–surface collisions. Proceedings of the National Academy of Sciences of the United States of America 110 (44), S. 17738 - 17743 (2013)
  49. 49.
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    Christian, H.; Hofele, R. V.; Urlaub, H.; Ficner, R.: Insights into the activation of the helicase Prp43 by biochemical studies and structural mass spectrometry. Nucleic Acids Research 42 (2) (2013)
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    Stagge, F.; Mitronova, G.; Belov, V. N.; Wurm, C. A.; Jakobs, S.: Snap-, CLIP- and Halo-tag labelling of budding yeast cells. PLoS One 8 (10) (2013)
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    Gapsys, V.; de Groot, B. L.; Briones, R.: Computational analysis of local membrane properties. Journal of Computer-Aided Molecular Design 27 (10) (2013)
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    Karamitros, C. S.; Konrad, M.: Bacterial co-expression of the alpha and beta protomers of human L-asparaginase-3: Achieving essential N-terminal exposure of a catalytically critical threonine located in the beta-subunit. Protein Expression and Purification 93 (2013)
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    Paltrinieri, L.; Borsari, M.; Battistuzzi, G.; Sola, M.; Dennison, C.; de Groot, B. L.; Corni, S.; Bortolotti, C. A.: How the dynamics of the metal-binding loop region controls the acid transition in cupredoxins. Biochemistry 52 (42), S. 7397 - 7404 (2013)
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    Rezaei-Ghaleh, N.; Klama, F.; Munari, F.; Zweckstetter, M.: Predicting the rotational tumbling of dynamic multidomain proteins and supramolecular complexes. Angewandte Chemie International Edition 52 (43), S. 11410 - 11414 (2013)
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    Arancillo, M.; Min, S. W.; Gerber, S.; Münster-Wandowski, A.; Wu, Y. J.; Herman, M.; Trimbuch, T.; Rah, J. C.; Ahnert-Hilger, G.; Riedel, D. et al.; Südhof, T. C.; Rosenmund, C.: Titration of syntaxin1 in Mammalian synapses reveals multiple roles in vesicle docking, priming, and release probability. The Journal of Neuroscience 33 (42), S. 16698 - 16714 (2013)
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    Hua, Y.; Woehler, A.; Kahms, M.; Haucke, V.; Neher, E.; Klingauf, J.: Blocking endocytosis enhances short-term synaptic depression under conditions of normal availability of vesicles. Neuron 80 (2), S. 343 - 349 (2013)
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    Büttner, L.; Seikowski, J.; Wawrzyniak, K.; Ochmann, A. L.; Höbartner, C.: Synthesis of spin-labeled riboswitch RNAs using convertible nucleosides and DNA-catalyzed RNA ligation. Bioorganic and Medicinal Chemistry 21 (20), S. 6171 - 6180 (2013)
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    Eisele, N. B.; Labokha, A.; Frey, S.; Görlich, D.; Richter , R. P.: Cohesiveness tunes assembly and morphology of FG nucleoporin domain meshworks - Implications for nuclear pore permeability. Biophysical Journal 105 (8), S. 1860 - 1870 (2013)
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    Karamitros, C. S.; Lim, J.; Konrad, M.: An Amplex Red-based fluorometric and spectrophotometric assay for L-asparaginase using its natural substrate. Analytical Biochemistry 445 (2013)
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    Simao, C.; Mas-Torrent, M.; André, V.; Duarte, M. T.; Techert, S.; Veciana, J.; Rovira, C.: Solid state photodimerisation of tetrathiafulvalene derivatives bearing carboxylate and carboxylic acid substituents. CrystEngComm 15 (46) (2013)
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    Atanassov., I.; Urlaub, H.: Increased proteome coverage by combining PAGE and peptide isoelectric focusing: Comparative study of gel-based separation approaches. Proteomics 13 (20), S. 2947 - 2955 (2013)
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    Bareth, B.; Dennerlein, S.; Mick, D. U.; Nikolov, M.; Urlaub, H.; Rehling, P.: The heme a synthase Cox15 associates with cytochrome c oxidase assembly intermediates during Cox1 maturation. Molecular and Cellular Biology 33 (20), S. 4128 - 4137 (2013)
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    Behrens, C.; Binotti, B.; Schmidt, C.; Robinson, C. V.; Chua, J. J. E.; Kühnel, K.: Crystal structure of the human short coiled coil protein and insights into SCOC-FEZ1 complex formation. PLoS One 8 (10) (2013)
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