Publikationen des Max-Planck-Instituts für biophysikalische Chemie


Zeitschriftenartikel (69)

  1. 1.
    Bauke, S.; Golibrzuch, K.; Wackerbarth, H.; Fendt, P.; Zigan, L.; Seefeldt, S.; Thiele, O.; Berg, T.: Optical sensor system for time-resolved quantification of methane concentrations: Validation measurements in a rapid compression machine. Journal of Quantitative Spectroscopy and Radiative Transfer 210, S. 101 - 110 (2018)
  2. 2.
    Oranges, M.; Guzzi, R.; Marsh, D.; Bartucci, R.: Ether-linked lipids: Spin-label EPR and spin echoes. Chemistry and Physics of Lipids 212, S. 130 - 137 (2018)
  3. 3.
    Bock, L. V.; Kolar, M. H.; Grubmüller, H.: Molecular simulations of the ribosome and associated translation factors. Current Opinion in Structural Biology 49, S. 27 - 35 (2018)
  4. 4.
    Reiner, A. M.; Schmidt, F.; Ryazanov, S.; Leonov, A.; Weckbecker, D.; Deeg, A. A.; Griesinger, C.; Giese, A.; Zinth, W.: Photophysics of diphenyl-pyrazole compounds in solutions and α-synuclein aggregates. Biochimica et Biophysica Acta (BBA) - General Subjects 1862 (4), S. 800 - 807 (2018)
  5. 5.
    Rosenzweig, S.; Holme, H. C. M.; Wilke, R. N.; Voit, D.; Frahm, J.; Uecker, M.: Simultaneous multi-slice MRI using cartesian and radial FLASH and regularized nonlinear inversion: SMS-NLINV. Magnetic Resonance in Medicine 79 (4), S. 2057 - 2066 (2018)
  6. 6.
    Valiente-Gabioud, A. A.; Riedel, D.; Outeiro, T. F.; Menacho-Márquez, M. A.; Griesinger, C.; Fernandez, C. O.: Binding modes of phthalocyanines to amyloid β peptide and their effects on amyloid fibril formation. Biophysical Journal 114 (5), S. 1036 - 1045 (2018)
  7. 7.
    Kadavath, H.; Cabrales-Fontela, Y.; Jaremko, M.; Jaremko, L.; Overkamp, K.; Biernat, J.; Mandelkow, E.; Zweckstetter, M.: The binding mode of a repeat-like Tau sequence with tubulin. Angewandte Chemie International Edition 57 (12), S. 3246 - 3250 (2018)
  8. 8.
    Weill, U.; Arakel, E. C.; Goldmann, O.; Golan, M.; Chuartzman, S.; Munro, S.; Schwappach, B.; Schuldiner, M.: Creating a systematic database of secretory pathway proteins uncovers new cargo for COPI. Traffic (2018)
  9. 9.
    Jaipuria, G.; Ukmar-Godec, T.; Zweckstetter, M.: Challenges and approaches to understand cholesterol-binding impact on membrane protein function: An NMR view. Cellular and Molecular Life Sciences (2018)
  10. 10.
    Dickmanns, A.; Zschiedrich, C. P.; Arens, J.; Parfentev, I.; Gundlach, J.; Hofele, R.; Neumann, P.; Urlaub, H.; Görke, B.; Ficner, R. et al.; Stulke, J.: Structural basis for the regulatory interaction of the methylglyoxal synthase MgsA with the carbon flux regulator Crh in Bacillus subtilis. Journal of Biological Chemistry (2018)
  11. 11.
    Buddeweg, A.; Sharma, K.; Urlaub, H.; Schmitz, R. A.: sRNA41 affects ribosome binding sites within polycistronic mRNAs in Methanosarcina mazei Gö1. Molecular Microbiology 107 (5), S. 595 - 609 (2018)
  12. 12.
    Descloux, A.; Grussmayer, K. S.; Bostan, E.; Lukes, T.; Bouwens, A.; Sharipov, A.; Geissbuehler, S.; Mahul-Mellier, A. L.; Lashuel, H. A.; Leutenegger, M. et al.; Lasser, T.: Combined multi-plane phase retrieval and super-resolution optical fluctuation imaging for 4D cell microscopy. Nature Photonics 12 (3), S. 165 - 172 (2018)
  13. 13.
    Hedrich, R.; Neher, E.: Venus flytrap: How an excitable, carnivorous plant works. Trends in Plant Science 23 (3), S. 220 - 234 (2018)
  14. 14.
    Ketenoglu, D.; Spiekermann, G.; Harder, M.; Oz, E.; Koz, C.; Yagci, M. C.; Yilmaz, E.; Yin, Z.; Sahle, C. J.; Detlefs, B. et al.; Yavas, H.: X-ray Raman spectroscopy of lithium-ion battery electrolyte solutions in a flow cell. Journal of Synchrotron Radiation 25 (2), S. 537 - 542 (2018)
  15. 15.
    Neef, N. E.; Bütfering, C.; Auer, T.; Metzger, F. L.; Euler, H. A.; Frahm, J.; Paulus, W.; Sommer, M.: Altered morphology of the nucleus accumbens in persistent developmental stuttering. Journal of Fluency Disorders 55, S. 84 - 93 (2018)
  16. 16.
    Wong, L. E.; Maier, J.; Wienands, J.; Becker, S.; Griesinger, C.: Sensitivity-enhanced Four-dimensional amide-amide correlation NMR experiments for sequential assignment of proline-rich disordered proteins. Journal of the American Chemical Society (2018)
  17. 17.
    Hovener, J.; Pravdivtsev, A. N.; Kidd, B.; Bowers, C. L.; Glöggler, S.; Kovtunov, K. V.; Plaumann, M.; Katz-Brull, R.; Buckenmaier, K.; Jerschow, A. et al.; Reineri, F.; Theis, T.; Shchepin, R. V.; Wagner, S.; Zacharias, N. M. M.; Bhattacharya, P.; Chekmenev, E. Y.: Parahydrogen-based hyperpolarization for biomedicine. Angewandte Chemie International Edition (2018)
  18. 18.
    Shirhatti, P. R.; Rahinov, I.; Golibrzuch, K.; Werdecker, J.; Geweke, J.; Altschäffel, J.; Kuma, S.; Auerbach, D. J.; Bartels, C.; AM., W.: Observation of the adsorption and desorption of vibrationally excited molecules on a metal surface. Nature Communications (2018)
  19. 19.
    Shi, C.; He, Y.; Hendriks, K.; de Groot, B. L.; Cai, X.; Tian, C.; Lange, A.; Sun, H.: A single NaK channel conformation is not enough for non-selective ion conduction. Nature Communications (2018)
  20. 20.
    Schroeder, S.; Kaufmann, J. D.; Grunwald, M.; Walla, P. J.; Lakomek, N. A.; Wingfield, P. T.: HIV-1 gp41 transmembrane oligomerization monitored by FRET and FCS. FEBS Letters (2018)
  21. 21.
    Butkevich, A.; Sednev, M. V.; Shojaei, H.; Belov, V. N.; Hell, S. W.: PONy dyes: Direct addition of P(III) nucleophiles to organic fluorophores. Organic Letters 20 (4), S. 1261 - 1264 (2018)
  22. 22.
    Butkevich, A.; Ta, H.; Ratz, M.; Stoldt, S.; Jakobs, S.; Belov, V. N.; Hell, S. W.: Two-color 810 nm STED nanoscopy of living cells with endogenous SNAP-tagged fusion proteins. ACS Chemical Biology 13 (2), S. 475 - 480 (2018)
  23. 23.
    Sonnleitner, E.; Wulf, A.; Campagne, S.; Pei, X. Y.; Wolfinger, M. T.; Forlani, G.; Prindl, K.; Abdou, L.; Resch, A.; Allain, F. H. et al.; Luisi, B. F.; Urlaub, H.; Bläsi, U.: Interplay between the catabolite repression control protein Crc, Hfq and RNA in Hfq-dependent translational regulation in Pseudomonas aeruginosa. Nucleic Acids Research 46 (3), S. 1470 - 1485 (2018)
  24. 24.
    Hilbert, T.; Sumpf, T.; Weiland, E.; Frahm, J.; Thiran, J. P.; Meuli, R.; Kober, T.; Krueger, G.: Accelerated T2 mapping combining parallel MRI and model-based reconstruction: GRAPPATINI. Journal of Magnetic Resonance Imaging (2018)
  25. 25.
    Ananth, A. N.; Mishra, A.; Frey, S.; Dwarkasing, A.; Versloot, R.; van der Giessen, E.; Görlich, D.; Onck, P.; Dekker, C.: Spatial structure of disordered proteins dictates conductance and selectivity in Nuclear Pore Complex mimics. eLife (2018)
  26. 26.
    Buannic, L.; Sperrin, L.; Dervisoglu, R.; Blanc, F.; Grey, C. P.: Proton distribution in Sc-doped BaZrO3: A solid state NMR and first principle calculations analysis. Physical Chemistry Chemical Physics 20 (6), S. 4317 - 4328 (2018)
  27. 27.
    Kucherenko, M. M.; Shcherbata, H. R.: miRNA targeting and alternative splicing in the stress response - events hosted by membrane-less compartments. Journal of Cell Science (2018)
  28. 28.
    Pieper, A.; Hohgardt, M.; Willich, M.; Gacek, D. A.; Hafi, N.; Pfennig, D.; Albrecht, A.; Walla, P. J.: Biomimetic light-harvesting funnels for re-directioning of diffuse light. Nature Communications (2018)
  29. 29.
    Simm, D.; Kollmar, M.: Waggawagga-CLI: A command-line tool for predicting stable single a-helices (SAH-domains), and the SAH-domain distribution across eukaryotes. PLoS One (2018)
  30. 30.
    Mao, Z.; Liou, S. H.; Khadka, N.; Jenney, F. E.; Goodin, D. B.; Seefeldt, L. C.; Adams, M. W. W.; Cramer, S. P.; Larsen, D. S.: Cluster-dependent charge-transfer dynamics in iron-sulfur proteins. Biochemistry 57 (6), S. 978 - 990 (2018)
  31. 31.
    Feliu, N.; Neher, E.; Parak, W. J.: Toward an optically controlled brain. Science (2018)
  32. 32.
    Gregor, C.; Sidenstein, S.; Andresen, M.; Sahl, S. J.; Danzl, J. G.; Hell, S. W.: Novel reversibly switchable fluorescent proteins for RESOLFT and STED nanoscopy engineered from the bacterial photoreceptor YtvA. Scientific Reports (2018)
  33. 33.
    Yatsenko, A. S.; Shcherbata, H. R.: Stereotypical architecture of the stem cell niche is spatiotemporally established by miR-125-dependent coordination of Notch and steroid signaling. Development 145, dev159178 (2018)
  34. 34.
    Roithová, A.; Klimešová, K.; Pánek, J.; Will, C. L.; Lührmann, R.; Stanek, D.; Girard, C.: The Sm-core mediates the retention of partially-assembled spliceosomal snRNPs in Cajal bodies until their full maturation. Nucleic Acids Research (2018)
  35. 35.
    Schubeis, T.; Le Marchand, T.; Andreas, L. B.; Pintacuda, G.: 1H magic-angle spinning NMR evolves as a powerful new tool for membrane proteins. Journal of Magnetic Resonance (2018)
  36. 36.
    Vlijm, R.; Li, X.; Panic, M.; Rüthnick, D.; Hata, S.; Herrmannsdörfer, F.; Kuner, T.; Heilemann, M.; Engelhardt, J.; Hell, S. W. et al.; Schiebel, E.: STED nanoscopy of the centrosome linker reveals a CEP68-organized, periodic rootletin network anchored to a C-Nap1 ring at centrioles. Proceedings of the National Academy of Sciences of the United States of America (2018)
  37. 37.
    Crémillieux, Y.; Salvati, R.; Dumont, U.; Pinaud, N.; Bouchaud, V.; Sanchez, S.; Glöggler, S.; Wong, A.: Online 1H-MRS measurements of time-varying lactate production in an animal model of glioma during administration of an anti-tumoral drug. NMR in Biomedicine 31 (2), e3861 (2018)
  38. 38.
    Faoro, R.; Bassu, M.; Mejia, Y. X.; Stephan, T.; Dudani, N.; Boeker, C.; Jakobs, S.; Burg, T. P.: Aberration-corrected cryoimmersion light microscopy. Proceedings of the National Academy of Sciences of the United States of America 115 (6), S. 1204 - 1209 (2018)
  39. 39.
    Ikeya, T.; Ban, D.; Lee, D.; Ito, Y.; Kato, K.; Griesinger, C.: Solution NMR views of dynamical ordering of biomacromolecules. Biochimica et Biophysica Acta (BBA) - General Subjects 1862 (2), S. 287 - 306 (2018)
  40. 40.
    Krohn, S.; Frahm, J.; Merboldt, K. D.; Wassmann, T.; Joseph, A. A.; Bürgers, R.: Diagnosis of disk displacement using real-time MRI: Clinical report of two patients. Journal of Prosthetic Dentistry 119 (2), S. 206 - 209 (2018)
  41. 41.
    Wang, X.; Roeloffs, V. B.; Klosowski, J.; Tan, Z.; Voit, D.; Uecker, U.; Frahm, J.: Model-based T1 mapping with sparsity constraints using single-shot inversion-recovery radial FLASH. Magnetic Resonance in Medicine 79 (2), S. 730 - 740 (2018)
  42. 42.
    Xu, Y.; Kuhlmann, J.; Brennich, M.; Komorowski, K.; Jahn, R.; Steinem, C.; Salditt, T.: Reconstitution of SNARE proteins into solid-supported lipid bilayer stacks and X-ray structure analysis. Biochimica et Biophysica Acta (BBA) - Biomembranes 1860 (2), S. 566 - 578 (2018)
  43. 43.
    Aich, A.; Wang, C.; Chowdhury, A.; Ronsör, C.; Pacheu-Grau, D.; Richter-Dennerlein, R.; Dennerlein, S.; Rehling, P.: COX16 promotes COX2 metallation and assembly during respiratory complex IV biogenesis. eLife (2018)
  44. 44.
    Haselbach, D.; Komarov, I.; Agafonov, D. E.; Hartmuth, K.; Graf, B.; Dybkov, O.; Urlaub, H.; Kastner, B.; Lührmann, R.; Stark, H.: Structure and conformational dynamics of the human spliceosomal Bact complex. Cell 172 (3), S. 454 - 464 (2018)
  45. 45.
    Salas-Estrada, L. A.; Leioatts, N.; Romo, T. D.; Grossfield, A.: Lipids alter rhodopsin function via ligand-like and solvent-like interactions. Biophysical Journal 114 (2), S. 355 - 367 (2018)
  46. 46.
    Kucherenko, M. M.; Shcherbata, H. R.: Stress-dependent miR-980 regulation of Rbfox1/A2bp1 promotes ribonucleoprotein granule formation and cell survival. Nature Communications (2018)
  47. 47.
    Neef, J.; Urban, N. T.; Ohn, T. L.; Frank, T.; Jean, P.; Hell, S. W.; Willig, K. I.; Moser, T.: Quantitative optical nanophysiology of Ca2+ signaling at inner hair cell active zones. Nature Communications (2018)
  48. 48.
    Lee, B. C.; Lee, H. M.; Kim, S.; Avanesov, A. S.; Lee, A.; Chun, B. H.; Vorbrüggen, G.; Gladyshev, V. N.: Expression of the methionine sulfoxide reductase lost during evolution extends Drosophila lifespan in a methionine-dependent manner. Scientific Reports (2018)
  49. 49.
    Atanasova, D. Y.; Tchekalarova, J.; Ivanova, N.; Nenchovska, Z.; Pavlova, E.; Atanassova, N.; Lazarov, N.: Losartan suppresses the kainate-induced changes of angiotensin AT(1) receptor expression in a model of comorbid hypertension and epilepsy. Life Sciences 193, S. 40 - 46 (2018)
  50. 50.
    Hallwass, F.; Teles, R. R.; Hellemann , E.; Griesinger, C.; Gil, R. R.; Navarro-Vázquez, A.: Measurement of residual chemical shift anisotropies in compressed PMMA gels. Automatic compensation of gel isotropic shift contribution. Magnetic Resonance in Chemistry (2018)
  51. 51.
    Cobos, C. J.; Knight, G.; Sölter, L.; Tellbach, E.; Troe, J.: Experimental and modelling study of the multichannel thermal dissociations of CH3F and CH2F. Physical Chemistry Chemical Physics (2018)
  52. 52.
    Bersuker, K.; Peterson, C. W. H.; To, M.; Sahl, S. J.; Savikhin, V.; Grossman, E. A.; Nomura, D. K.; Olzmann, J. A.: A proximity labeling strategy provides insights into the composition and dynamics of lipid droplet proteomes. Developmental Cell 44 (1), S. 97 - 112 (2018)
  53. 53.
    Kandratsenka, A.; Jiang, H.; Dorenkamp, Y.; Janke, S. M.; Kammler, M.; Wodtke, A. M.; Bünermann, O.: Unified description of H-atom-induced chemicurrents and inelastic scattering. Proceedings of the National Academy of Sciences of the United States of America (2018)
  54. 54.
    Richter, K. N.; Revelo, N. H.; Seitz, K. J.; Helm, M. S.; Sarkar, D.; Saleeb, R. S.; D'Este, E.; Eberle, J.; Wagner, E.; Vogl, C. et al.; Lazaro, D. F.; Richter, F.; Coy‐Vergara, J.; Coceano, G.; Boyden, E. S.; Duncan, R. R.; Hell, S. W.; Lauterbach, M. A.; Lehnart, S. E.; Moser, T.; Outeiro, T.; Rehling, P.; Schwappach, B.; Testa, I.; Zapiec, B.; Rizzoli, S. O.: Glyoxal as an alternative fixative to formaldehyde in immunostaining and super-resolution microscopy. EMBO Journal 37 (1), S. 139 - 159 (2018)
  55. 55.
    Bury, D.; Belov, V. N.; Qi, Y.; Hayen, H.; Volmer, D. A.; Bruning, T.; Koch, H. M.: Determination of urinary metabolites of the emerging UV filter octocrylene by online-SPE-LC-MS/MS. Analytical Chemistry 90 (1), S. 944 - 951 (2018)
  56. 56.
    Behler, J.; Sharma, K.; Reimann, V.; Wilde, A.; Urlaub, H.; Hess, W. R.: The host-encoded RNase E endonuclease as the crRNA maturation enzyme in a CRISPR-Cas subtype III-Bv system. Nature Microbiology 3, S. 367 - 377 (2018)
  57. 57.
    Coquelle, N.; Sliwa, M.; Woodhouse, J.; Schirò, G.; Adam, V.; Aquila, A.; Barends, T. R. M.; Boutet, S.; Byrdin, M.; Carbajo, S. et al.; De a Mora, E.; Doak, R. B.; Feliks, M.; Fieschi, F.; Foucar, L.; Guillon, V.; Hilpert, M.; Hunter, M. S.; Jakobs, S.; Koglin, J. E.; Kovacsova, G.; Lane, T. J.; Lévy, B.; Liang, M.; Nass, K.; Ridard, J.; Robinson, J. S.; Roome, C. M.; Ruckebusch, C.; Seaberg, M.; Thepaut, M.; Cammarata, M.; Demachy, I.; Field, M.; Shoeman, R. L.; Bourgeois, D.; Colletier, J. P.; Schlichting, I.; Weik, M.: Chromophore twisting in the excited state of a photoswitchable fluorescent protein captured by time-resolved serial femtosecond crystallography. Nature Chemistry 10, S. 31 - 37 (2018)
  58. 58.
    Dorenkamp, Y.; Jiang, H.; Köckert, H.; Hertl, N.; Kammler, M.; Janke, S. M.; Kandratsenka, A.; Wodtke, A. M.; Bünermann, O.: Hydrogen collisions with transition metal surfaces: Universal electronically nonadiabatic adsorption. The Journal of Chemical Physics (2018)
  59. 59.
    Enikeeva, F.; Munk, A.; Werner, F.: Bump detection in heterogeneous Gaussian regression. Bernoulli 24 (2), S. 1266 - 1306 (2018)
  60. 60.
    Gregor, C.; Gwosch, K.; Sahl, S. J.; Hell, S. W.: Strongly enhanced bacterial bioluminescence with the ilux operon for single-cell imaging. Proceedings of the National Academy of Sciences of the United States of America 115 (5), S. 962 - 967 (2018)
  61. 61.
    Korandová, M.; Krucek, T.; Szakosová, K.; Kodrík, D.; Kühnlein, R. P.; Tomasková, J.; Frydrychová, R. C.: Chronic low-dose pro-oxidant treatment stimulates transcriptional activity of telomeric retroelements and increases telomere length in Drosophila. Journal of Insect Physiology 104, S. 1 - 8 (2018)
  62. 62.
    Lasorsa, A.; Natile, G.; Rosato, A.; Tadini-Buoninsegni , F.; Arnesano , F.: Monitoring interactions inside cells by advanced spectroscopies: Overview of copper transporters and cisplatin. Current Medicinal Chemistry 25 (4), S. 462 - 477 (2018)
  63. 63.
    Marsh, D.: Spin-label order parameter calibrations for slow motion. Applied Magnetic Resonance 49 (1), S. 97 - 106 (2018)
  64. 64.
    Martinez Hernandez, A.; Urbanke, H.; Gillman, A. L.; Lee, J.; Ryazanov, S.; Agbemenyah, H. Y.; Benito, E.; Jain, G.; Kaurani, L.; Grigorian, G. et al.; Leonov, A.; Rezaei-Ghaleh, N.; Wilken, P.; Arce, F. T.; Wagner, J.; Fuhrman, M.; Caruana, M.; Camilleri, A.; Vassallo, N.; Zweckstetter, M.; Benz, R.; Giese, A.; Schneider, A.; Korte, M.; Lal, R.; Griesinger, C.; Eichele, G.; Fischer, A.: The diphenylpyrazole compound anle138b blocks Aβ channels and rescues disease phenotypes in a mouse model for amyloid pathology. EMBO Molecular Medicine 10 (1), S. 32 - 47 (2018)
  65. 65.
    Metzger, F. L.; Auer, T.; Helms, G.; Paulus, W.; Frahm, J.; Sommer, M.; Neef, N. E.: Shifted dynamic interactions between subcortical nuclei and inferior frontal gyri during response preparation in persistent developmental stuttering. Brain Structure and Function 223 (1), S. 165 - 182 (2018)
  66. 66.
    Neher, E.: Neurosecretion: What can we learn from chromaffin cells. Pflügers Archiv - European Journal of Physiology 470 (1), S. 7 - 11 (2018)
  67. 67.
    Reddy, J. G.; Pratihar, S.; Ban, D.; Frischkorn, S.; Becker, S.; Griesinger, C.: Simultaneous determination of fast and slow dynamics in molecules using extreme CPMG relaxation dispersion experiments. Journal of Biomolecular NMR 70 (1), S. 1 - 9 (2018)
  68. 68.
    Sommerfeld, M.; Munk, A.: Inference for empirical Wasserstein distances on finite spaces. Journal of the Royal Statistical Society. Series B, Statistical Methodology 80 (1), S. 219 - 238 (2018)
  69. 69.
    Wagner, L.; Braunschweig, L.; Eiffert, H.; Tsaknakis, K.; Kamin, D.; D'Este, E.; Messer, P. K.; Hell, A. K.; Lorenz, H. M.: Detection of bacteria colonizing titanium spinal implants in children. Surgical Infections 19 (1), S. 71 - 77 (2018)

Buchkapitel (1)

  1. 70.
    Werner, F.: Adaptivity and oracle inequalities in linear statistical inverse problems: A (numerical) survey. In: New Trends in Parameter Identification for Mathematical Models (Hg. Hofmann, B.; Leitao, A.; Zubelli, J. P.). Birkhäuser, Cham (2018)
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