Publications

Journal Article (9066)

1. 1.
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   Rankovic, M.; Zweckstetter, M.: Upregulated levels and pathological aggregation of abnormally phosphorylated Tau-Protein in children with neurodevelopmental disorders. Neuroscience and Biobehavioral Reviews 98, pp. 1 - 9 (2019)
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   Roeloffs, V. B.; Rosenzweig, S.; Holme, H. C. M.; Uecker, M.; Frahm, J.: Frequency-modulated SSFP with radial sampling and subspace reconstruction: A time-efficient alternative to phase-cycled bSFFP. Magnetic Resonance in Medicine 81 (3), pp. 1566 - 1579 (2019)
3. 3.
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   Glöggler, S.; Yang, S.; McCormick, J.; Mamone, S.; Bouchard, L. S.: Nuclear spin singlet states in photoactive molecules: From fluorescence/NMR bimodality to a bimolecular spin singlet state switch. Angewandte Chemie International Edition 58 (9), pp. 2879 - 2883 (2019)
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   pre-print
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   Kastner, B.; Will, C. L.; Stark, H.; Lührmann, R.: Structural insights into nuclear pre-mRNA splicing in higher eukaryotes. Cold Spring Harbor Perspectives in Biology (2019)
5. 5.
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   pre-print
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   Tekwani Movellan, K.; Najbauer, E.; Pratihar, S.; Salvi, M.; Giller, K.; Becker, S.; Andreas, L. B.: Alpha protons as NMR probes in deuterated proteins. Journal of Biomolecular NMR (2019)
6. 6.
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   supplementary-material
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   Wegner, J.; Valora, G.; Halbmair, K.; Kehl, A.; Worbs, B.; Bennati, M.; Diederichsen, U.: Semi‐rigid nitroxide spin label for long‐range EPR distance measurements of lipid bilayer embedded β‐peptides. Chemistry - A European Journal 25 (9), pp. 2203 - 2207 (2019)
7. 7.
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   Kroll, J.; Jaime Tobon, L. M.; Vogl, C.; Neef, J.; Kondratiuk, I.; König, M.; Strenzke, N.; Wichmann, C.; Milosevic, I.; Moser, T.: Endophilin-A regulates presynaptic Ca2⁺ influx and synaptic vesicle recycling in auditory hair cells. The EMBO Journal (2019)
8. 8.
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   Bartsch, A.; Llabrés, S.; Pein, F.; Kattner, C.; Schön, M.; Diehn, M.; Tanabe, M.; Munk, A.; Zachariae, U.; Steinem, C.: High-resolution experimental and computational electrophysiology reveals weak β-lactam binding events in the porin PorB. Scientific Reportsvolume (2019)
9. 9.
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   Richter, F.; Dennerlein, S.; Nikolov, M.; Jans, D. C.; Naumenko, N.; Aich, A.; MacVicar, T.; Linden, A.; Jakobs, S.; Urlaub, H. et al.; Langer, T.; Rehling, P.: ROMO1 is a constituent of the human presequence translocase required for YME1L protease import. The Journal of Cell Biology 218 (2), 598 (2019)
10. 10.
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    Tuijtel, M. W.; Koster, A. J.; Jakobs, S.; Faas, F. G. A.; Sharp, T. H.: Correlative cryo super-resolution light and electron microscopy on mammalian cells using fluorescent proteins. Scientific Reportsvolume (2019)
11. 11.
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    Antunes, D.; Chowdhury, A.; Aich, A.; Saladi, S.; Harpaz, N.; Stahl, M.; Schuldiner, M.; Herrmann, J. M.; Rehling, P.; Rapaport, D.: Overexpression of branched-chain amino acid aminotransferases rescues the growth defects of cells lacking the Barth syndrome-related gene TAZ1. Journal of Molecular Medicine 97 (2), pp. 269 - 279 (2019)
12. 12.
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    Kupke, S. Y.; Riedel, D.; Frensing, T.; Zmora, P.; Reichl, U.: A novel type of influenza A virus-derived defective interfering particle with nucleotide substitutions in its genome. Journal of Virology (2019)
13. 13.
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    Papadopoulos, N.; Parra, R. G.; Söding, J.: PROSSTT: Probabilistic simulation of single-cell RNA-seq data for complex differentiation processes. Bioinformatics (2019)
14. 14.
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    Watson, E. R.; Brown, N. G.; Peters, J. M.; Stark, H.; Schulman, B. A.: Posing the APC/C E3 ubiquitin ligase to orchestrate cell division. Trends in Cell Biology 29 (2), pp. 117 - 134 (2019)
15. 15.
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    van Maldegem, L. M.; Sansjofre, P.; Weijers, J. W. H.; Wolkenstein, K.; Strother, P. K.; Wörmer, L.; Hefter, J.; Nettersheim, B. J.; Hoshino, Y.; Schouten, S. et al.; Damsté, J. S. S.; Nath, N.; Griesinger, C.; Kuznetsov, N. B.; Elie, M.; Elvert, M.; Tegelaar, E.; Gleixner, G.; Hallmann, C.: Bisnorgammacerane traces predatory pressure and the persistent rise of algal ecosystems after Snowball Earth. Nature Communications (2019)
16. 16.
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    Orlando, T.; Dervisoglu, R.; Levien, M.; Tkach, I.; Prisner, T. F.; Andreas, L.; Denysenkov, V. P.; Bennati, M.: Dynamic nuclear polarization of ¹³C nuclei in the liquid state over a 10 Tesla field range. Angewandte Chemie International Edition 58 (5), pp. 1402 - 1406 (2019)
17. 17.
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    Wagner, R. J. V.; Krüger, B. C.; Park, G. B.; Wallrabe, M.; Wodtke, A. M.; Schäfer, T.: Electron transfer mediates vibrational relaxation of CO in collisions with Ag(111). PhysicaL Chemstry Chemical Physics 21 (4), 1650 (2019)
18. 18.
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    Hubrich, R.; Park, Y.; Mey, I.; Jahn, R.; Steinem, C.: SNARE-mediated fusion of single chromaffin granules with pore-spanning membranes. Biophysical Journal 116 (2), pp. 308 - 318 (2019)
19. 19.
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    Najbauer, E.; Movellan, K. T.; Schubeis, T.; Schwarzer, T.; Castiglione, K.; Giller, K.; Pintacuda, G.; Becker, S.; Andreas, L.: Probing membrane protein insertion into lipid bilayers by solid-state NMR. ChemPhysChem 20 (2), pp. 302 - 310 (2019)
20. 20.
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    Doulliet, D. C.; Pinson, B.; Ceschin, J.; Hürlimann, H. C.; Saint-Marc, C.; Laporte, D.; Claverol, S.; Konrad, M.; Bonneu, M.; Daignan-Fornier, B.: Metabolomics and proteomics identify the toxic form and the associated cellular binding targets of the anti-proliferative drug AICAR. Journal of Biological Chemistry 294, pp. 805 - 815 (2019)
21. 21.
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    van der Velde, J. H. M.; Smit, J. H.; Hebisch, E.; Punter, M.; Cordes, T.: Self-healing dyes for super-resolution fluorescence microscopy. Journal of Physics D: Applied Physics 52 (3), 034001 (2019)
22. 22.
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    Cordeiro, S.; Finol-Urdaneta, R. K.; Köpfer, D.; Markushina, A.; Song, J.; French, R. J.; Kopec, W.; de Groot, B. L.; Giacobassi, M. J.; Leavitt, L. S. et al.; Raghuraman, S.; Teichert, R. W.; Olivera, B. M.; Terlau, H.: Conotoxin κM-RIIIJ, a tool targeting asymmetric heteromeric K_v1 channels. Proceedings of the National Academy of Sciences of the United States of America 116 (3), pp. 1059 - 1064 (2019)
23. 23.
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    Garofalo, R.; Wohlgemuth, I.; Pearson, M.; Lenz, C.; Urlaub, H.; Rodnina, M. V.: Broad range of missense error frequencies in cellular proteins. Nucleic Acids Research, (2019)
24. 24.
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    Chen, L.; Lau, J. A.; Schwarzer, D.; Meyer, J.; Verma, V. B.; Wodtke, A. M.: The Sommerfeld ground-wave limit for a molecule adsorbed at a surface. Science 363 (6423), pp. 158 - 161 (2019)
25. 25.
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    Zylicz, J. J.; Bousard, A.; Zumer, K.; Dossin, F.; Mohammad, E.; da Rocha, S. T.; Schwalb, B.; Syx, L.; Dingli, F.; Loew, D. et al.; Cramer, P.; Heard, E.: The implication of early chromatin changes in X chromosome inactivation. Cell 176 (1-2), pp. 182 - 197 (2019)
26. 26.
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    Takago, H.; Oshima-Takago, T.; Moser, T.: Disruption of otoferlin alters the mode of exocytosis at the mouse inner hair cell ribbon synapse. Frontiers in Molecular Neuroscience (2019)
27. 27.
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    Briones, R.; Blau, C.; Kutzner, C.; de Groot, B. L.; Aponte-Santamaría, C.: GROmaρs: A GROMACS-based toolset to analyze density maps derived from molecular dynamics simulations. Biophysical Journal 116 (1), pp. 4 - 11 (2019)
28. 28.
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    Mirdita, M.; Steinegger, M.; Söding, J.: MMseqs2 desktop and local web server app for fast, interactive sequence searches. Bioinformatics (2019)
29. 29.
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    Dienemann, C.; Schwalb, B.; Schilbach, S.; Cramer, P.: Promoter distortion and opening in the RNA polymerase II cleft. Molecular Cell 73 (1), pp. 97 - 106 (2019)
30. 30.
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    Drees, L.; Königsmann, T.; Jaspers, M. H. J.; Pflanz, R.; Riedel, D.; Schuh, R.: Conserved function of the matriptase-prostasin proteolytic cascade during epithelial morphogenesis. PLoS Genetics (2019)
31. 31.
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    Butkevich, A.; Bossi, M. L.; Lukinavicius, G.; Hell, S. W.: Triarylmethane fluorophores resistant to oxidative photobluing. Journal of the American Chemical Society 141 (2), pp. 981 - 989 (2019)
32. 32.
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    Doeppner, T. R.; Herz, J.; Bähr, M.; Tonchev, A. B.; Stoykova, A.: Zbtb20 regulates developmental neurogenesis in the olfactory bulb and gliogenesis after adult brain injury. Molecular Neurobiology 56 (1), pp. 567 - 582 (2019)
33. 33.
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    Farinacci, M.; Krahn, T.; Dinh, W.; Volk, H. D.; Düngen, H. D.; Wagner, J.; Konen, T.; von Ahsen, O.: Circulating endothelial cells as biomarker for cardiovascular diseases. Research and Practice in Thrombosis and Haemostasis 3 (1), pp. 49 - 58 (2019)
34. 34.
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    Krohn, S.; Joseph, A. A.; Voit, D.; Michaelis, T.; Merboldt, K. D.; Buergers, R.; Frahm, J.: Multi-slice real-time MRI of temporomandibular joint dynamics. Dentomaxillofacial Radiology 48 (1), 20180162 (2019)
35. 35.
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    Liepe, J.; Sidney, J.; Lorenz, F. K. M.; Sette, A.; Mishto, M.: Mapping the MHC class I spliced immunopeptidome of cancer cells. Cancer Immunology Research 7 (1), pp. 62 - 76 (2019)
36. 36.
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    Liu, Y.; Navarro-Vázquez, A.; Gil, R. R.; Griesinger, C.; Martin, G. E.; Williamson, R. T.: Application of anisotropic NMR parameters to the confirmation of molecular structure. Nature Protocols 14, pp. 217 - 247 (2019)
37. 37.
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    Lutz, H.; Jaeger, V.; Weidner, T.; de Groot, B. L.: Interpretation of interfacial protein spectra with enhanced molecular simulation ensembles. Journal of Chemical Theory and Computation 15 (1), pp. 698 - 707 (2019)
38. 38.
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    Özcan, A.; Pausch, P.; Linden, A.; Wulf, A.; Schühle, K.; Heider, J.; Urlaub, H.; Heimerl, T.; Bange, G.; Randau, L.: Type IV CRISPR RNA processing and effector complex formation in Aromatoleum aromaticum. Nature Microbiology 4, pp. 89 - 96 (2019)
39. 39.
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    Pinho, R.; Paiva, I.; Jerčić, K. G.; Fonseca-Ornelas, L.; Gerhardt, E.; Fahlbusch, C.; Garcia-Esparcia, P.; Kerimoglu, C.; Pavlou, M. A.; Villar-Piqué, A. et al.; Szegő, E.; Fonseca, T. L.; Odoardi, F.; Soeroes, S.; Rego, A. C.; Fischle, W.; Schwamborn, J. C.; Meyer, T.; Kügler, S.; Ferrer, I.; Attems, J.; Fischer, A.; Becker, S.; Zweckstetter, M.; Borovecki, F.; Outeiro, T. F.: Nuclear localization and phosphorylation modulate pathological effects of alpha-synuclein. Human Molecular Genetics 28 (1), pp. 31 - 50 (2019)
40. 40.
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    Romach, Y.; Lazariev, A.; Avrahami, I.; Kleißler, F.; Arroyo-Camejo, S.; Bar-Gill, N.: Measuring environmental quantum noise exhibiting a nonmonotonic spectral shape. Physical Review Applied 11 (1), 014064 (2019)
41. 41.
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    Rovo, P.; Smith, C. A.; Gauto, D.; de Groot, B. L.; Schanda, P.; Linser, R.: Mechanistic insights into microsecond time-scale motion of solid proteins using complementary ¹⁵N and ¹H relaxation dispersion techniques. Journal of the American Chemical Society 141 (2), pp. 858 - 869 (2019)
42. 42.
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    Saul, P.; Mamone, S.; Glöggler, S.: Nuclear singlet multimers (NUSIMERs) with long-lived singlet states. Chemical Science 10, pp. 413 - 417 (2019)
43. 43.
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    Sweeny, B. C.; Pan, H.; Ard, S. G.; Shuman, N. S.; Viggiano, A. A.; Keyes, N.; Xie, C.; Guo, H.; Ushakov, V. G.; Troe, J.: Mechanistic details of the MnO⁺ + H-₂/D-₂ reaction through temperature-dependent kinetics and statistical modeling. International Journal of Mass Spectrometry 435, pp. 26 - 33 (2019)
44. 44.
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    Troe, J.: Simplified analysis and representation of multi-channel thermal unimolecular reactions. Journal of Physical Chemistry A 123 (5), pp. 1007 - 1014 (2019)
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    Wolkenstein, K.; Fuentes-Monteverde, J. C.; Nath, N.; Oji, T.; Griesinger, C.: Hypalocrinins, taurine-conjugated anthraquinone and biaryl pigments from the deep sea crinoid Hypalocrinus naresianus. Journal of Natural Products 82 (1), pp. 163 - 167 (2019)
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    Banerjee, S.; Zeng, L.; Schunkert, H.; Söding, J.: Bayesian multiple logistic regression for case-control GWAS. PLoS Genetics (2018)
47. 47.
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    Aldeghi, M.; Gapsys, V.; de Groot, B. L.: Accurate estimation of ligand binding affinity changes upon protein mutation. ACS Central Science 4 (12), pp. 1708 - 1718 (2018)
48. 48.
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    Ramani, A.; Mariappan, A.; Gottardo, M.; Mandad, S.; Urlaub, H.; Avidor-Reiss, T.; Riparbelli, M.; Giuliano, C.; Debec, A.; Feederle, R. et al.; Gopalakrishnan, J.: Plk1/Polo phosphorylates Sas-4 at the onset of mitosis for an efficient recruitment of pericentriolar material to centrosomes. Cell Reports (2018)
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    Farnung, L.; Vos, S. M.; Cramer, P.: Structure of transcribing RNA polymerase II-nucleosome complex. Nature Communications (2018)
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    Brüning, L.; Hackert, P.; Martin, R.; Gallesio, J. D.; Aquino, G. R. R.; Urlaub, H.; Sloan, K. E.; Bohnsack, M. T.: RNA helicases mediate structural transitions and compositional changes in pre-ribosomal complexes. Nature Communications (2018)
51. 51.
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    Neher, E.; Brose, N.: Dynamically primed synaptic vesicle states: Key to understand synaptic short-term plasticity. Neuron (2018)
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    Bao, P.; Boon, K. L.; Will, C. L.; Hartmuth, K.; Lührmann, R.: Multiple RNA-RNA tertiary interactions are dispensable for formation of a functional U2/U6 RNA catalytic core in the spliceosome. Nucleic Acids Research 46 (22), pp. 12126 - 12138 (2018)
53. 53.
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    Braun, J.; Fischer, S.; Xu, Z. Z.; Dalia, S.; Ghoneim, D. H.; Gimbel, A. T.; Plessmann, U.; Urlaub, H.; Mathews, D. H.; Weigand, J. E.: Identification of new high affinity targets for Roquin based on structural conservation. Nucleic Acids Research 46 (22), pp. 12109 - 12125 (2018)
54. 54.
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    Haase, N.; Holtkamp, W.; Lipowsky, R.; Rodnina, M. V.; Rudorf, S.: Decomposition of time-dependent fluorescence signals reveals codon-specific kinetics of protein synthesis. Nucleic Acids Research 46 (22), e130 (2018)
55. 55.
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    Keppeler, D.; Merino, R. M.; de la Morena, D. L.; Bali, B.; Huet, A. T.; Gehrt, A.; Wrobel, C.; Subramanian, S.; Dombrowski, T.; Wolf, F. et al.; Rankovic, V.; Neef, A.; Moser, T.: Ultrafast optogenetic stimulation of the auditory pathway by targeting-optimized Chronos. The EMBO Journal 37 (24), e99649 (2018)
56. 56.
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    Bocker, H. T.; Heinrich, T.; Liebmann, L.; Hennings, J. C.; Seemann, E.; Gerth, M.; Jakovčevski, I.; Preobraschenski, J.; Kessels, M. M.; Westermann, M. et al.; Isbrandt, D.; Jahn, R.; Qualmann, B.; Hübner, C. A.: The Na⁺/H⁺ exchanger Nhe1 modulates network excitability via GABA release. Cerebral Cortex (2018)
57. 57.
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    Grabner, C.; Moser, T.: Individual synaptic vesicles mediate stimulated exocytosis from cochlear inner hair cells. Proceedings of the National Academy of Sciences of the United States of America 115 (50), pp. 12811 - 12816 (2018)
58. 58.
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    Sharma, S.; Lindau, M.: Molecular mechanism of fusion pore formation driven by the neuronal SNARE complex. Proceedings of the National Academy of Sciences of the United States of America 115 (50), pp. 12751 - 12756 (2018)
59. 59.
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    Liu, H.; Pang, B.; Garces, R.; Dervisoglu, R.; Chen, L.; Andreas, L.; Zhang, K.: Helical fibers via evaporation-driven self-assembly of surface-acylated cellulose nanowhiskers. Angewandte Chemie International Edition 57 (50), pp. 16323 - 16328 (2018)
60. 60.
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    Maiera, I. L.; Hofer, S.; Joseph, A. A.; Merboldt, K. D.; Eggert, E.; Behme, D.; Schregel, K.; von der Brelie, C.; Rohde, V.; Koch, J. et al.; Psychogios, M. N.; Frahm, J.; Liman, J.; Bähr, M.: Quantification of spinal cord compression using T1 mapping in patients with cervical spinal canal stenosis - Preliminary experience. NeuroImage: Clinical (2018)
61. 61.
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    Mariappan, A.; Soni, K.; Schorpp, K.; Zhao, F.; Minakar, A.; Zheng, X.; Mandad, S.; Macheleidt, I.; Ramani, A.; Kubelka, T. et al.; Dawidowski, M.; Golfmann, K.; Wason, A.; Yang, C.; Simons, J.; Schmalz, H. G.; Hyman, A. A.; Aneja, R.; Ullrich, R.; Urlaub, H.; Odenthal, M.; Büttner, R.; Li, H.; Sattler, M.; Hadian, K.; Gopalakrishnan, J.: Inhibition of CPAP-tubulin interaction prevents proliferation of centrosome-amplified cancer cells. The EMBO Journal (2018)
62. 62.
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    Schweisfurt, M. A.; Frahm, J.; Farina, D.; Schweizer, R.: Comparison of fMRI digit representations of the dominant and non-dominant hand in the human primary somatosensory cortex. Frontiers in Human Neuroscience (2018)
63. 63.
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    Ambrozkiewicz, M. C.; Schwark, M.; Kishimoto-Suga, M.; Borisova, E.; Hori, K.; Salazar-Lazaro, A.; Rusanova, A.; Altas, B.; Piepkorn, L.; Bessa, P. et al.; Schaub, T.; Zhang, X.; Rabe, T.; Ripamonti, S.; Rosario, M.; Akiyama, H.; Jahn, O.; Kobayashi, T.; Hoshino, M.; Tarabykin, V.; Kawabe, H.: Polarity acquisition in cortical neurons is driven by synergistic action of Sox9-regulated Wwp1 and Wwp2 E3 ubiquitin ligases and intronic miR-140. Neuron 100 (5), pp. 1097 - 1115 (2018)
64. 64.
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    Al‐Moyed, H.; Cepeda, A. P.; Jung, S.; Moser, T.; Kügler, S.; Reisinger, E.: A dual-AAV approach restores fast exocytosis and partially rescues auditory function in deaf otoferlin knock-out mice. EMBO Molecular Medicine 10 (12), e9396 (2018)
65. 65.
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    Pacheu-Grau, D.; Callegari, S.; Emperador, S.; Thompson, K.; Aich, A.; Topol, S. E.; Spencer, E. G.; McFarland, R.; Ruiz-Pesini, E.; Torkamani, A. et al.; Taylor, R. W.; Montoya, J.; Rehling, P.: Mutations of the mitochondrial carrier translocase channel subunit TIM22 cause early-onset mitochondrial myopathy. Human Molecular Genetics 27 (23), pp. 4135 - 4144 (2018)
66. 66.
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    Riemer , D.; Schilling, W.; Goetz, A.; Zhang, Y.; Gehrke, S.; Tkach, I.; Holloczki , O.; Das, S.: CO₂-catalyzed efficient dehydrogenation of amines with detailed mechanistic and kinetic studies. ACS Catalysis 8 (12), pp. 11679 - 11687 (2018)
67. 67.
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    Zhang, H.; Lv, K.; Fang, B.; Forster, M. C.; Dervisoglu, R.; Andreas, L. B.; Zhang, K.; Chen, S.: Crucial role for oxygen functional groups in the oxygen reduction reaction electrocatalytic activity of nitrogen-doped carbons. Electrochimica Acta 292, pp. 942 - 950 (2018)
68. 68.
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    Lidschreiber, M.; Easter, A. D.; Battaglia, S.; Rodríguez-Molina, J. B.; Casañal, A.; Carminati, M.; Baejen, C.; Grzechnik, P.; Maier, K. C.; Cramer, P. et al.; Passmore, L. A.: The APT complex is involved in non-coding RNA transcription and is distinct from CPF. Nucleic Acids Research 46 (21), pp. 11528 - 11538 (2018)
69. 69.
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    Jaipuria, G.; Giller, K.; Leonov, A.; Becker, S.; Zweckstetter, M.: Insights into cholesterol/membrane protein interactions using paramagnetic solid-state NMR. Chemistry - A European Journal 24 (66), pp. 17606 - 17611 (2018)
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    Hartich, D.; Godec, A.: Duality between relaxation and first passage in reversible Markov dynamics: Rugged energy landscapes disentangled. New Journal of Physics (2018)
71. 71.
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    Uraji, J.; Scheffler, K.; Schuh, M.: Functions of actin in mouse oocytes at a glance. Journal of Cell Science (2018)
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    Heras‐Garvin, A.; Weckbecker, D.; Ryazanov, S.; Leonov, A.; Griesinger, C.; Giese, A.; Wenning, G. K.; Stefanova, N.: Anle138b modulates α-synuclein oligomerization and prevents motor decline and neurodegeneration in a mouse model of multiple system atrophy. Movement Disorders (2018)
73. 73.
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    Wu, Y.; Masurat, F.; Preis, J.; Bringmann, H.: Sleep counteracts aging phenotypes to survive starvation-induced developmental arrest in C. elegans. Current Biology 28 (22), pp. 3610 - 3624 (2018)
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