Publications

Journal Article (9748)

1.
Journal Article
Lapolla, A.; Godec, A.: BetheSF V2: 3-point propagator and additional external potentials. Computer Physics Communications 269, 108131 (2021)
MPG.PuRe
DOI
publisher-version
2.
Journal Article
Vemulapalli, S. P.; Becker, S.; Griesinger, C.; Rezaei-Ghaleh, N.: Combined high-pressure and multiquantum NMR and molecular simulation propose a role for N-terminal salt bridges in amyloid-beta. The Journal of Physical Chemistry Letters 12 (40), pp. 9933 - 9939 (2021)
MPG.PuRe
DOI
publisher-version
3.
Journal Article
Binotti, B.; Jahn, R.; Pérez-Lara, A.: An overview of the synaptic vesicle lipid composition. Archives of Biochemistry and Biophysics 709, 108966 (2021)
MPG.PuRe
DOI
publisher-version
4.
Journal Article
Lapolla, A.; Vossel, M.; Godec, A.: Time- and ensemble-average statistical mechanics of the Gaussian network model. Journal of Physics A 54 (35), 355601 (2021)
MPG.PuRe
DOI
publisher-version
5.
Journal Article
Bhatta, A.; Dienemann, C.; Cramer, P.; Hillen, H.: Structural basis of RNA processing by human mitochondrial RNase P. Nature Structural and Molecular Biology 28 (9), pp. 713 - 723 (2021)
MPG.PuRe
DOI
publisher-version
6.
Journal Article
Kabinger, F.; Stiller, C.; Schmitzova, J.; Dienemann, C.; Kokic, G.; Hillen, H. S.; Höbartner, C.; Cramer, P.: Mechanism of molnupiravir-induced SARS-CoV-2 mutagenesis. Nature Structural and Molecular Biology 28 (9), pp. 740 - 746 (2021)
MPG.PuRe
DOI
publisher-version
7.
Journal Article
Nagy, G.; Grubmüller, H.: Implementation of a Bayesian secondary structure estimation method for the SESCA circular dichroism analysis package. Computer Physics Communications 266, 108022 (2021)
MPG.PuRe
DOI
publisher-version
8.
Journal Article
Fingerhut, J.; Borodin, D.; Schwarzer, M.; Skoulatakis, G.; Auerbach, D. J.; Wodtke, A. M.; Kitsopoulos, T. N.: The barrier for CO2 functionalization to formate on hydrogenated Pt. Journal of Physical Chemistry A 125 (34), pp. 7396 - 7405 (2021)
MPG.PuRe
DOI
9.
Journal Article
Jochheim, F. A.; Tegunov, D.; Hillen, H. S.; Schmitzova, J.; Kokic, G.; Dienemann, C.; Cramer, P.: The structure of a dimeric form of SARS-CoV-2 polymerase. Communications Biology 4, 999 (2021)
MPG.PuRe
DOI
publisher-version
10.
Journal Article
Borodin, D.; Schwarzer, M.; Hahn, H. W.; Fingerhut, J.; Wang, Y.; Auerbach, D. J.; Guo, H.; Schroeder, J.; Kitsopoulos, T. N.; Wodtke, A. M.: The puzzle of rapid hydrogen oxidation on Pt(111). Molecular Physics, In Press; e1966533 (2021)
MPG.PuRe
DOI
11.
Journal Article
Hartich, D.; Godec, A.: Thermodynamic uncertainty relation bounds the extent of anomalous diffusion. Physical Review Letters 127 (8), 080601 (2021)
MPG.PuRe
DOI
publisher-version
12.
Journal Article
Mironenko, A.; Zachariae, U.; de Groot, B. L.; Kopec, W.: The persistent question of potassium channel permeation mechanisms. Journal of Molecular Biology 433 (17), 167002 (2021)
MPG.PuRe
DOI
13.
Journal Article
Nair, R. M.; Seenivasan, A.; Liu, B.; Chen, D.; Lowe, E. D.; Lorenz, S.: Reconstitution and structural analysis of a HECT ligase-ubiquitin complex via an activity-based probe. ACS Chemical Biology, In Press (2021)
MPG.PuRe
DOI
14.
Journal Article
Zumer, K.; Maier, K. C.; Farnung, L.; Jaeger, M. G.; Rus, P.; Winter, G.; Cramer, P.: Two distinct mechanisms of RNA polymerase II elongation stimulation in vivo. Molecular Cell 81 (15), pp. 3096 - 3109.e8 (2021)
MPG.PuRe
DOI
15.
Journal Article
Helm, M. S.; Dankovich, T. M.; Mandad, S.; Rammner, B.; Jähne, S.; Salimi, V.; Koerbs, C.; Leibrandt, R.; Urlaub, H.; Schikorski, T. et al.; Rizzoli, S. O.: A large-scale nanoscopy and biochemistry analysis of postsynaptic dendritic spines. Nature Neuroscience 24 (8), pp. 1151 - 1162 (2021)
MPG.PuRe
DOI
16.
Journal Article
Quan, J.; Chang, Y.; Li, Z.; Zhao, Y.; Luo, Z.; Wu, Y.; Zhang, S.; Chen, Z.; Yang, J.; Yuan, K. et al.; Yang, X.; Krüger, B. C.; Schwarzer, D.; Wodtke, A. M.; Park, G. B.: A free electron laser-based 1+1′ resonance-enhanced multiphoton ionization scheme for rotationally resolved detection of OH radicals with correct relative intensities. Journal of Molecular Spectroscopy 380, 111509 (2021)
MPG.PuRe
DOI
17.
Journal Article
Wang, H.; Xiong, L.; Cramer, P.: Structures and implications of TBP–nucleosome complexes. Proceedings of the National Academy of Sciences of the USA 118 (30), e2108859118 (2021)
MPG.PuRe
DOI
18.
Journal Article
Beckert, B.; Leroy, E. C.; Sothiselvam, S.; Bock, L. V.; Svetlov, M. S.; Graf, M.; Arenz, S.; Abdelshahid, M.; Seip, B.; Grubmüller, H. et al.; Mankin, A. S.; Innis, C. A.; Vàzquez-Laslop, N.; Wilson, D. N.: Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics. Nature Communications 12, 4466 (2021)
MPG.PuRe
DOI
publisher-version
19.
Journal Article
Schilbach, S.; Aibara, S.; Dienemann, C.; Grabbe, F.; Cramer, P.: Structure of RNA polymerase II pre-initiation complex at 2.9 Å defines initial DNA opening. Cell 184 (15), pp. 4064 - 4072.e28 (2021)
MPG.PuRe
DOI
20.
Journal Article
King, A. J.; Songdej, D.; Downes, D. J.; Beagrie, R. A.; Liu, S.; Buckley, M.; Hua, P.; Suciu, M. C.; Oudelaar, A. M.; Hanssen, L. L. P. et al.; Jeziorska, D.; Roberts, N.; Carpenter, S. J.; Francis, H.; Telenius, J.; Olijnik, A.-A.; Sharpe, J. A.; Sloane-Stanley, J.; Eglinton, J.; Kassouf, M. T.; Orkin, S. H.; Pennacchio, L. A.; Davies, J. O. J.; Hughes, J. R.; Higgs, D. R.; Babbs, C.: Reactivation of a developmentally silenced embryonic globin gene. Nature Communications 12, 4439 (2021)
MPG.PuRe
DOI
publisher-version
21.
Journal Article
Lecroart, L.; Hertl, N.; Dorenkamp, Y.; Jiang, H.; Kitsopoulos, T. N.; Kandratsenka, A.; Bünermann, O.; Wodtke, A. M.: Adsorbate modification of electronic nonadiabaticity: H atom scattering from p(2 × 2) O on Pt(111). The Journal of Chemical Physics 155 (3), 034702 (2021)
MPG.PuRe
DOI
22.
Journal Article
García-Martínez, J.; Medina, D. A.; Bellvís, P.; Sun, M.; Cramer, P.; Chávez, S.; Pérez-Ortín, J. E.: The total mRNA concentration buffering system in yeast is global rather than gene-specific. RNA, In Press (2021)
MPG.PuRe
DOI
23.
Journal Article
Chen, Y.; Vos, S. M.; Dienemann, C.; Ninov, M.; Urlaub, H.; Cramer, P.: Allosteric transcription stimulation by RNA polymerase II super elongation complex. Molecular Cell 81 (16), pp. 3386 - 3399.e10 (2021)
MPG.PuRe
DOI
24.
Journal Article
Huang, X.; Hu, H.; Webster, A.; Zou, F.; Du, J.; Patel, D. J.; Sachidanandam, R.; Toth, K. F.; Aravin, A. A.; Li, S.: Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex. Nature Communications 12, 4061 (2021)
MPG.PuRe
DOI
publisher-version
25.
Journal Article
Reinhardt, M.; Grubmüller, H.: GROMACS implementation of free energy calculations with non-pairwise variationally derived intermediates. Computer Physics Communications 264, 107931 (2021)
MPG.PuRe
DOI
publisher-version
26.
Journal Article
Ng, S. C.; Güttler, T.; Görlich, D.: Recapitulation of selective nuclear import and export with a perfectly repeated 12mer GLFG peptide. Nature Communications 12, 4047 (2021)
MPG.PuRe
DOI
publisher-version
27.
Journal Article
Fang, P.; Ji , Y.; Silbern, I.; Viner, R.; Oellerich, T.; Pan, K. T.; Urlaub, H.: Evaluation and optimization of high-field asymmetric waveform ion-mobility spectrometry for multiplexed quantitative site-specific N-glycoproteomics. Analytical Chemistry 93 (25), pp. 8846 - 8855 (2021)
MPG.PuRe
DOI
28.
Journal Article
Orth, B.; Sander, B.; Möglich, A.; Diederichs, K.; Eilers, M.; Lorenz, S.: Identification of an atypical interaction site in the BTB domain of the MYC-interacting zinc-finger protein 1. Structure, In Press (2021)
MPG.PuRe
DOI
29.
Journal Article
Juranek, J. K.; Mukherjee, K.; Jahn, R.; Li, J.-Y.: Coordinated bi-directional trafficking of synaptic vesicle and active zone proteins in peripheral nerves. Biochemical and Biophysical Research Communications 559, pp. 92 - 98 (2021)
MPG.PuRe
DOI
publisher-version
30.
Journal Article
Bozhilov, Y. K.; Downes, D. J.; Telenius, J.; Oudelaar, A. M.; Olivier, E. N.; Mountford, J. C.; Hughes, J. R.; Gibbons, R. J.; Higgs, D. R.: A gain-of-function single nucleotide variant creates a new promoter which acts as an orientation-dependent enhancer-blocker. Nature Communications 12, 3806 (2021)
MPG.PuRe
DOI
publisher-version
31.
Journal Article
Hillen, H. S.; Lavdovskaia, E.; Nadler, F.; Hanitsch, E.; Linden, A.; Bohnsack, K. E.; Urlaub, H.; Richter-Dennerlein, R.: Structural basis of GTPase-mediated mitochondrial ribosome biogenesis and recycling. Nature Communications 12, 3672 (2021)
MPG.PuRe
DOI
publisher-version
32.
Journal Article
Witkowska, A.; Heinz, L. P.; Grubmüller, H.; Jahn, R.: Tight docking of membranes before fusion represents a novel, metastable state with unique properties. Nature Communications 12, 3606 (2021)
MPG.PuRe
DOI
33.
Journal Article
Aevarsson, A.; Kaczorowska, A.-K.; Adalsteinsson, B. T.; Ahlqvist, J.; Al-Karadaghi, S.; Altenbuchner, J.; Arsin, H.; Átlasson, Ú. Á.; Brandt, D.; Cichowicz-Cieślak, M. et al.; Cornish, K. A. S.; Courtin, J.; Dabrowski, S.; Dahle, H.; Djeffane, S.; Dorawa, S.; Dusaucy, J.; Enault, F.; Fedøy, A.-E.; Freitag-Pohl, S.; Fridjonsson, O. H.; Galiez, C.; Glomsaker, E.; Guérin, M.; Gundesø, S. E.; Gudmundsdóttir, E. E.; Gudmundsson, H.; Håkansson, M.; Henke, C.; Helleux, A.; Henriksen, J. R.; Hjörleifdóttir, S.; Hreggvidsson, G. O.; Jasilionis, A.; Jochheim, A.; Jónsdóttir, I.; Jónsdóttir, L. B.; Jurczak-Kurek, A.; Kaczorowski, T.; Kalinowski, J.; Kozlowski, L. P.; Krupovic, M.; Kwiatkowska-Semrau, K.; Lanes, O.; Lange, J.; Lebrat, J.; Linares-Pastén, J.; Liu, Y.; Lorentsen, S. A.; Lutterman, T.; Mas, T.; Merré, W.; Mirdita, M.; Morzywołek, A.; Ndela, E. O.; Karlsson, E. N.; Olgudóttir, E.; Pedersen, C.; Perler, F.; Pétursdóttir, S. K.; Plotka, M.; Pohl, E.; Prangishvili, D.; Ray, J. L.; Reynisson, B.; Róbertsdóttir, T.; Sandaa, R.-A.; Sczyrba, A.; Skírnisdóttir, S.; Söding, J.; Solstad, T.; Steen, I. H.; Stefánsson, S. K.; Steinegger, M.; Overå, K. S.; Striberny, B.; Svensson, A.; Szadkowska, M.; Tarrant, J.; Terzian, P.; Tourigny, M.; van den Bergh, T.; Vanhalst, J.; Vincent, J.; Vroling, B.; Walse, B.; Wang, L.; Watzlawick, H.; Welin, M.; Werbowy, O.; Wons, E.; Zhang, R.: Going to extremes: A metagenomic journey into the dark matter of life. FEMS Microbiology Letters 368 (12), fnab067 (2021)
MPG.PuRe
DOI
34.
Journal Article
Hua, P.; Badat, M.; Hanssen, L. L. P.; Hentges, L. D.; Crump, N.; Downes, D. J.; Jeziorska, D. M.; Oudelaar, A. M.; Schwessinger, R.; Taylor, S. et al.; Milne, T. A.; Hughes, J. R.; Higgs, D. R.; Davies, J. O. J.: Defining genome architecture at base-pair resolution. Nature, In Press (2021)
MPG.PuRe
DOI
35.
Journal Article
Pokern, Y.; Eltzner, B.; Huckemann, S. F.; Beeken, C.; Stubbe, J.; Tkach, I.; Bennati, M.; Hiller, M.: Statistical analysis of ENDOR spectra. Proceedings of the National Academy of Sciences of the USA 118 (27), e2023615118 (2021)
MPG.PuRe
DOI
publisher-version
36.
Journal Article
Yildirim, A.; Mozaffari-Jovin, S.; Wallisch, A. K.; Schäfer, J.; Ludwig, S. E. J.; Urlaub, H.; Lührmann, R.; Wolfrum, U.: SANS (USH1G) regulates pre-mRNA splicing by mediating the intra-nuclear transfer of tri-snRNP complexes. Nucleic Acids Research 49 (10), pp. 5845 - 5866 (2021)
MPG.PuRe
DOI
publisher-version
37.
Journal Article
Aibara, S.; Schilbach, S.; Cramer, P.: Structures of mammalian RNA polymerase II pre-initiation complexes. Nature 594 (7861), pp. 124 - 128 (2021)
MPG.PuRe
DOI
38.
Journal Article
Borodin, D.; Rahinov, I.; Fingerhut, J.; Schwarzer, M.; Hörandl, S.; Skoulatakis, G.; Schwarzer, D.; Kitsopoulos, T. N.; Wodtke, A. M.: NO binding energies to and diffusion barrier on Pd obtained with velocity-resolved kinetics. The Journal of Physical Chemistry C 125 (21), pp. 11773 - 11781 (2021)
MPG.PuRe
DOI
publisher-version
39.
Journal Article
Rengachari, S.; Schilbach, S.; Aibara, S.; Dienemann, C.; Cramer, P.: Structure of human Mediator-RNA polymerase II pre-initiation complex. Nature 594 (7861), pp. 129 - 133 (2021)
MPG.PuRe
DOI
40.
Journal Article
Osman, S.; Mohammad, E.; Lidschreiber, M.; Stuetzer, A.; Bazsó, F. L.; Maier, K. C.; Urlaub, H.; Cramer, P.: The Cdk8 kinase module regulates interaction of the mediator complex with RNA polymerase II. Journal of Biological Chemistry 296, 100734 (2021)
MPG.PuRe
DOI
publisher-version
41.
Journal Article
Kim, C.; Shon, M. J.; Kim, S. H.; Eun, G. S.; Ryu, J.-K.; Hyeon, C.; Jahn, R.; Yoon, T.-Y.: Extreme parsimony in ATP consumption by 20S complexes in the global disassembly of single SNARE complexes. Nature Communications 12, 3206 (2021)
MPG.PuRe
DOI
42.
Journal Article
Lapolla, A.; Godec, A.: Toolbox for quantifying memory in dynamics along reaction coordinates. Physical Review Research 3 (2), L022018 (2021)
MPG.PuRe
DOI
publisher-version
43.
Journal Article
Oberbeckmann, E.; Niebauer, V.; Watanabe, S.; Farnung, L.; Moldt, M.; Schmid, A.; Cramer, P.; Peterson, C. L.; Eustermann, S.; Hopfner, K.-P. et al.; Korber, P.: Ruler elements in chromatin remodelers set nucleosome array spacing and phasing. Nature Communications 12, 3232 (2021)
MPG.PuRe
DOI
publisher-version
44.
Journal Article
Cavazza, T.; Takeda, Y.; Politi, A.; Aushev, M.; Aldag, P.; Baker, C.; Choudhary, M.; Bucevičius, J.; Lukinavičius, G.; Elder, K. et al.; Blayney, M.; Lucas-Hahn, A.; Niemann, H.; Herbert, M.; Schuh, M.: Parental genome unification is highly error-prone in mammalian embryos. Cell 184 (11), pp. 2860 - 2877.e22 (2021)
MPG.PuRe
DOI
publisher-version
45.
Journal Article
Fianu, I.; Dienemann, C.; Aibara, S.; Schilbach, S.; Cramer, P.: Cryo-EM structure of mammalian RNA polymerase II in complex with human RPAP2. Communications Biology 4, 606 (2021)
MPG.PuRe
DOI
publisher-version
46.
Journal Article
Wensien, M.; Rabe von Pappenheim, F.; Funk, L. M.; Kloskowski, P.; Curth, U.; Diederichsen, U.; Uranga, J.; Ye, J.; Fang, P.; Pan, K. T. et al.; Urlaub, H.; Mata, R. A.; Sautner, V.; Tittmann, K.: A lysine–cysteine redox switch with an NOS bridge regulates enzyme function. Nature 593 (7859), pp. 460 - 464 (2021)
MPG.PuRe
DOI
47.
Journal Article
Quentin, C.; Gerasimaite, R.; Freidzon, A.; Atabekyan, L. S.; Lukinavičius, G.; Belov, V. N.; Mitronova, G.: Direct visualization of amlodipine intervention into living cells by means of fluorescence microscopy. Molecules 26 (10), 2997 (2021)
MPG.PuRe
DOI
publisher-version
48.
Journal Article
Hallumi, E.; Shalah, R.; Lo, W. L.; Corso, J.; Oz, I.; Beach, D.; Wittman, S.; Isenberg, A.; Sela, M.; Urlaub, H. et al.; Weiss, A.; Yablonski, D.: Itk promotes the integration of TCR and CD28 costimulation through its direct substrates SLP-76 and Gads. The Journal of Immunology 206 (10), pp. 2322 - 2337 (2021)
MPG.PuRe
DOI
49.
Journal Article
Hett, T.; Zbik, T.; Mukherjee, S.; Matsuoka, H.; Bönigk, W.; Klose, D.; Rouillon, C.; Brenner, N.; Peuker, S.; Klement, R. et al.; Steinhoff, H.-J.; Grubmüller, H.; Seifert, R.; Schiemann, O.; Kaupp, U. B.: Spatiotemporal resolution of conformational changes in biomolecules by combining pulsed electron–electron double resonance spectroscopy with microsecond freeze-hyperquenching. Journal of the American Chemical Society 143 (18), pp. 6981 - 6989 (2021)
MPG.PuRe
DOI
publisher-version
50.
Journal Article
Gapsys, V.; Yildirim, A.; Aldeghi, M.; Khalak, Y.; van der Spoel, D.; de Groot, B. L.: Accurate absolute free energies for ligand-protein binding based on non-equilibrium approaches. Communications Chemistry 4, 61 (2021)
MPG.PuRe
DOI
publisher-version
51.
Journal Article
Banerjee, S.; Simonetti, F.L.; Detrois, K. E.; Kaphle, A.; Mitra, R.; Nagial, R.; Söding, J.: Tejaas: reverse regression increases power for detecting trans-eQTLs. Genome Biology 22, 142 (2021)
MPG.PuRe
DOI
publisher-version
52.
Journal Article
Hecker, F.; Stubbe, J.; Bennati, M.: Detection of water molecules on the radical transfer pathway of ribonucleotide reductase by 17O electron–nuclear double resonance spectroscopy. The Journal of the American Chemical Society, In Press (2021)
MPG.PuRe
DOI
53.
Journal Article
Roy, R. N.; Hendriks, K.; Kopec, W.; Abdolvand, S.; Weiss, K. L.; de Groot, B. L.; Lange, A.; Sun, H.; Coates, L.: Structural plasticity of the selectivity filter in a nonselective ion channel. IUCrJ 8 (3), pp. 421 - 430 (2021)
MPG.PuRe
DOI
publisher-version
54.
Journal Article
Baumann, H. M.; Gapsys, V.; de Groot, B. L.; Mobley, D. L.: Challenges encountered applying equilibrium and nonequilibrium binding free energy calculations. Journal of Physical Chemistry B 125 (17), pp. 4241 - 4261 (2021)
MPG.PuRe
DOI
publisher-version
55.
Journal Article
Bünermann, O.; Kandratsenka, A.; Wodtke, A. M.: Inelastic scattering of H atoms from surfaces. Journal of Physical Chemistry A 125 (15), pp. 3059 - 3076 (2021)
MPG.PuRe
DOI
publisher-version
56.
Journal Article
Ge, W.; Meier, M.; Roth, C.; Söding, J.: Bayesian Markov models improve the prediction of binding motifs beyond first order. NAR: Genomics and Bioinformatics 3 (2), lquab026 (2021)
MPG.PuRe
DOI
publisher-version
57.
Journal Article
Mishto, M.; Mansurkhodzhaev, A.; Rodriguez-Calvo, T.; Liepe, J.: Potential mimicry of viral and pancreatic β cell antigens through non-spliced and cis-spliced zwitter epitope candidates in Type 1 Diabetes. Frontiers in Immunology 12, 656451 (2021)
MPG.PuRe
DOI
publisher-version
58.
Journal Article
Hillen, H. S.; Markov, D. A.; Wojtas, I. D.; Hofmann, K. B.; Lidschreiber, M.; Cowan, A. T.; Jones, J. L.; Temiakov, D.; Cramer, P.; Anikin, M.: The pentatricopeptide repeat protein Rmd9 recognizes the dodecameric element in the 3′-UTRs of yeast mitochondrial mRNAs. Proceedings of the National Academy of Sciences of the USA 118 (15), e2009329118 (2021)
MPG.PuRe
DOI
59.
Journal Article
Naarman-de Vries, I. S.; Senatore, R.; Moritz, B.; Marx, G.; Urlaub, H.; Niessing, D.; Ostareck, D. H.; Ostareck-Lederer, A.: Methylated HNRNPK acts on RPS19 to regulate ALOX15 synthesis in erythropoiesis. Nucleic Acids Research 49 (6), pp. 3507 - 3523 (2021)
MPG.PuRe
DOI
publisher-version
60.
Journal Article
Uno, K.; Aktalay, A.; Bossi, M. L.; Irie, M.; Belov, V. N.; Hell, S. W.: Turn-on mode diarylethenes for bioconjugation and fluorescence microscopy of cellular structures. Proceedings of the National Academy of Sciences of the USA 118 (14), e2100165118 (2021)
MPG.PuRe
DOI
61.
Journal Article
Farnung, L.; Ochmann, M.; Engeholm, M.; Cramer, P.: Structural basis of nucleosome transcription mediated by Chd1 and FACT. Nature Structural and Molecular Biology 28 (4), pp. 382 - 387 (2021)
MPG.PuRe
DOI
62.
Journal Article
Oudelaar, A. M.; Beagrie, R. A.; Kassouf, M. T.; Higgs, D. R.: The mouse alpha-globin cluster: A paradigm for studying genome regulation and organization. Current Opinion in Genetics and Development 67, pp. 18 - 24 (2021)
MPG.PuRe
DOI
publisher-version
63.
Journal Article
So, C.; Cheng, S.; Schuh, M.: Phase separation during germline development. Trends in Cell Biology 31 (4), pp. 254 - 268 (2021)
MPG.PuRe
DOI
publisher-version
64.
Journal Article
Werner, M.; Gapsys, V.; de Groot, B. L.: One plus one makes three: Triangular coupling of correlated amino acid mutations. Journal of Physical Chemistry Letters 12 (12), pp. 3195 - 3201 (2021)
MPG.PuRe
DOI
publisher-version
65.
Journal Article
Choi, J.; Lysakovskai, K.; Lysakovskaia, K.; Stik, G.; Demel, C.; Söding, J.; Tian, T. V.; Graf, T.; Cramer, P.: Evidence for additive and synergistic action of mammalian enhancers during cell fate determination. eLife 10, e65381 (2021)
MPG.PuRe
DOI
publisher-version
66.
Journal Article
Wohlgemuth, I.; Garofalo, R.; Samatova, E. N.; Günenç, A. N.; Lenz, C.; Urlaub, H.; Rodnina, M. V.: Translation error clusters induced by aminoglycoside antibiotics. Nature Communications 12, 1830 (2021)
MPG.PuRe
DOI
publisher-version
67.
Journal Article
Medina, L.; González-Lizárraga, F.; Dominguez-Meijide, A.; Ploper, D.; Parrales, V.; Sequeira, S.; Cima-Omori, M.-S.; Zweckstetter, M.; Bel, E. D.; Michel, P. P. et al.; Outeiro, T. F.; Raisman-Vozari, R.; Chehín, R.; Socias, S. B.: Doxycycline Interferes With Tau Aggregation and Reduces Its Neuronal Toxicity. Frontiers in Aging Neuroscience 13, 635760 (2021)
MPG.PuRe
DOI
publisher-version
68.
Journal Article
Butola, T.; Alvanos, T.; Hintze, A.; Koppensteiner, P.; Kleindienst, D.; Shigemoto, R.; Wichmann, C.; Moser, T.: RIM-Binding Protein 2 organizes Ca2+channel topography and regulates release probability and vesicle replenishment at a fast central synapse. bioRxiv, 435607 (2021)
MPG.PuRe
DOI
pre-print
69.
Journal Article
Weber, M.; Leutenegger, M.; Stoldt, S.; Jakobs, S.; Mihaila, T. S.; Butkevich, A. N.; Hell, S. W.: MINSTED fluorescence localization and nanoscopy. Nature Photonics 15, pp. 361 - 366 (2021)
MPG.PuRe
DOI
publisher-version
70.
Journal Article
Heinz, L. P.; Grubmüller, H.: Per|Mut: Spatially resolved hydration entropies from atomistic simulations. Journal of Chemical Theory and Computation, In Press (2021)
MPG.PuRe
DOI
71.
Journal Article
Buelens, F. P.; Leonov, H.; de Groot, B. L.; Grubmüller, H.: ATP-magnesium coordination: Protein structure-based force field evaluation and corrections. Journal of Chemical Theory and Computation 17 (3), pp. 1922 - 1930 (2021)
MPG.PuRe
DOI
publisher-version
72.
Journal Article
Caizzi, L.; Monteiro-Martins, S.; Schwalb, B.; Lysakovskaya, K.; Schmitzova, J.; Sawicka, A.; Chen, Y.; Lidschreiber, M.; Cramer, P.: Efficient RNA polymerase II pause release requires U2 snRNP function. Molecular Cell, In Press (2021)
MPG.PuRe
DOI
73.
Journal Article
Schmidt, R.; Weihs, T.; Wurm, C. A.; Jansen, I.; Rehman, J.; Sahl, S. J.; Hell, S.: MINFLUX nanometer-scale 3D imaging and microsecond-range tracking on a common fluorescence microscope. Nature Communications 12, 1478 (2021)
MPG.PuRe
DOI
publisher-version
74.
Journal Article
Larke, M. S. C.; Schwessinger, R.; Nojima, T.; Telenius, J.; Beagrie, R. A.; Downes, D. J.; Oudelaar, A. M.; Truch, J.; Graham, B.; Bender, M. A. et al.; Proudfoot, N. J.; Higgs, D. R.; Hughes, J. R.: Enhancers predominantly regulate gene expression during differentiation via transcription initiation. Molecular Cell 81 (5), pp. 983 - 997.e7 (2021)
MPG.PuRe
DOI
75.
Journal Article
Rawat, P.; Böhning, M.; Hummel, B.; Aprile-Garcia, F.; Pandit, A. S.; Eisenhardt, N.; Khavaran, A.; Niskanen, E.; Vos, S. M.; Palvimo, J. J. et al.; Pichler, A.; Cramer, P.; Sawarkar, R.: Stress-induced nuclear condensation of NELF drives transcriptional downregulation. Molecular Cell 81 (5), pp. 1013 - 1026.e11 (2021)
MPG.PuRe
DOI
publisher-version
76.
Journal Article
Daday, C.; de Groot, B. L.: Lipid–protein forces predict conformational changes in a mechanosensitive channel. European Biophysics Journal 50 (2), pp. 181 - 186 (2021)
MPG.PuRe
DOI
publisher-version
77.
Journal Article
de Groot, B. L.; Janshoff, A.; Steinem, C.; Zweckstetter, M.: Special issue: Multicomponent lipid membranes—how molecular organisation leads to function. European Biophysics Journal 50 (2), pp. 107 - 108 (2021)
MPG.PuRe
DOI
publisher-version
78.
Journal Article
Grothe, T.; Nowak, J.; Jahn, R.; Walla, P. J.: Selected tools to visualize membrane interactions. European Biophysics Journal 50 (2), pp. 211 - 222 (2021)
MPG.PuRe
DOI
publisher-version
79.
Journal Article
Kroppen, B.; Teske, N.; Yambire, K. F.; Denkert, N.; Mukherjee, I.; Tarasenko, D.; Jaipuria, G.; Zweckstetter, M.; Milosevic, I.; Steinem, C. et al.; Meinecke, M.: Cooperativity of membrane-protein and protein–protein interactions control membrane remodeling by epsin 1 and affects clathrin-mediated endocytosis. Cellular and Molecular Life Sciences 78 (5), pp. 2355 - 2370 (2021)
MPG.PuRe
DOI
publisher-version
80.
Journal Article
Najbauer, E.; Becker, S.; Giller, K.; Zweckstetter, M.; Lange, A.; Steinem, C.; de Groot, B. L.; Griesinger, C.; Andreas, L. B.: Structure, gating and interactions of the voltage-dependent anion channel. European Biophysics Journal 50 (2), pp. 159 - 172 (2021)
MPG.PuRe
DOI
publisher-version
81.
Journal Article
Özçete, Ö. D.; Moser, T.: A sensory cell diversifies its output by varying Ca2+ influx‐release coupling among active zones. EMBO Journal 40 (5), e106010 (2021)
MPG.PuRe
DOI
publisher-version
82.
Journal Article
Pein, F.; Eltzner, B.; Munk, A.: Analysis of patchclamp recordings: model-free multiscale methods and software. European Biophysics Journal 50 (2), pp. 187 - 209 (2021)
MPG.PuRe
DOI
publisher-version
83.
Journal Article
Risselada, H. J.; Grubmüller, H.: How proteins open fusion pores: insights from molecular simulations. European Biophysics Journal 50 (2), pp. 279 - 293 (2021)
MPG.PuRe
DOI
publisher-version
84.
Journal Article
Rivière, G.; Jaipuria, G.; Andreas, L. B.; Leonov, A.; Giller, K.; Becker, S.; Zweckstetter, M.: Membrane-embedded TSPO: an NMR view. European Biophysics Journal 50 (2), pp. 173 - 180 (2021)
MPG.PuRe
DOI
publisher-version
85.
Journal Article
Tkach, I.; Diederichsen, U.; Bennati, M.: Studies of transmembrane peptides by pulse dipolar spectroscopy with semi-rigid TOPP spin labels. European Biophysics Journal 50 (2), pp. 143 - 157 (2021)
MPG.PuRe
DOI
publisher-version
86.
Journal Article
Levien, M.; Reinhard, M.; Hiller, M.; Tkach, I.; Bennati, M.; Orlando, T.: Spin density localization and accessibility in organic radicals for liquid-state DNP efficiency. Physical Chemistry Chemical Physics 23 (8), pp. 4480 - 4485 (2021)
MPG.PuRe
DOI
publisher-version
87.
Journal Article
Jiang, H.; Tao, X.; Kammler, M.; Ding, F.; Wodtke, A.; Kandratsenka, A.; Miller III, T. F.; Bünermann, O.: Small nuclear quantum effects in scattering of H and D from graphene. Journal of Physical Chemistry Letters 12 (7), pp. 1991 - 1996 (2021)
MPG.PuRe
DOI
88.
Journal Article
Mansurkhodzhaev, A.; Barbosa, C. R. R.; Mishto, M.; Liepe, J.: Proteasome-generated cis-spliced peptides and their potential role in CD8+ T cell tolerance. Frontiers in Immunology 12, 614276 (2021)
MPG.PuRe
DOI
publisher-version
89.
Journal Article
Yatsenko, A. S.; Kucherenko, M. M.; Xie, Y.; Urlaub, H.; Shcherbata, H. R.: Exocyst-mediated membrane trafficking of the lissencephaly-associated ECM receptor dystroglycan is required for proper brain compartmentalization. eLife 10, e63868 (2021)
MPG.PuRe
DOI
publisher-version
90.
Journal Article
Liu, H.; Koros, C.; Strohäker, T.; Schulte, C.; Bozi, M.; Varvaresos, S.; de Opakua, A. I.; Simitsi, A. M.; Bougea, A.; Voumvourakis, K. et al.; Maniati, M.; Papageorgiou, S. G.; Hauser, A.‐.; Becker, S.; Zweckstetter, M.; Stefanis, L.; Gasser, T.: A novel SNCA A30G mutation causes familial Parkinsonʼs disease. Movement Disorders, In Press (2021)
MPG.PuRe
DOI
91.
Journal Article
Endres, T.; Solvie, D.; Heidelberger, J. B.; Andriolett, V.; Baluapuri, A.; Ade, C. P.; Muhar, M.; Eilers, U.; Vos, S. M.; Cramer, P. et al.; Zuber, J.; Beli, P.; Popov, N.; Wolf, E.; Gallant, P.; Eilers, M.: Ubiquitylation of MYC couples transcription elongation with double-strand break repair at active promoters. Molecular Cell 81 (4), pp. 830 - 844.e13 (2021)
MPG.PuRe
DOI
92.
Journal Article
Zhang, Y.; Daday, C.; Gu, R. X.; Cox, C. D.; Martinac, B.; de Groot, B. L.; Walz, T.: Visualization of the mechanosensitive ion channel MscS under membrane tension. Nature 590 (7846), pp. 509 - 514 (2021)
MPG.PuRe
DOI
publisher-version
93.
Journal Article
Savicheva, E. A.; Seikowski, J.; Kast, J. I.; Grünig, C. R.; Belov, V. N.; Hell, S. W.: Fluorescence assisted capillary electrophoresis of glycans enabled by the negatively charged auxochromes in 1-Aminopyrenes. Angewandte Chemie International Edition 60 (7), pp. 3720 - 3726 (2021)
MPG.PuRe
DOI
publisher-version
94.
Journal Article
Gray, A. L. H.; Steren, C. A.; Haynes, I. W.; Bermejo, G. A.; Favretto, F.; Zweckstetter, M.; Do, T. D.: Structural Flexibility of Cyclosporine A Is Mediated by Amide Cis–Trans Isomerization and the Chameleonic Roles of Calcium. Journal of Physical Chemistry B 125 (5), pp. 1378 - 1391 (2021)
MPG.PuRe
DOI
95.
Journal Article
Sawicka, A.; Villamil, G.; Lidschreiber, M.; Darzacq, X.; Dugast‐Darzacq, C.; Schwalb, B.; Cramer, P.: Transcription activation depends on the length of the RNA polymerase II C‐terminal domain. EMBO Journal 40 (9), e107015 (2021)
MPG.PuRe
DOI
publisher-version
96.
Journal Article
Wittig, S.; Ganzella, M.; Kostmann, S.; Barth, M.; Riedel, D.; Perez-Lara, A.; Jahn, R.; Schmidt, C.: Cross-linking mass spectrometry uncovers protein interactions and functional assemblies in synaptic vesicle membranes. Nature Communications 12, 858 (2021)
MPG.PuRe
DOI
publisher-version
97.
Journal Article
Scheffler, K.; Uraji, J.; Jentoft, I.; Cavazza, T.; Mönnich, E.; Mogessie, B.; Schuh, M.: Two mechanisms drive pronuclear migration in mouse zygotes. Nature Communications 12, 841 (2021)
MPG.PuRe
DOI
publisher-version
98.
Journal Article
Zhang, Y.; Laurentiis, E. D.; Bohnsack, K. E.; Wahlig, M.; Ranjan, N.; Gruseck, S.; Hackert, P.; Wölfle, T.; Rodnina, M. V.; Schwappach, B. et al.; Rospert, S.: Ribosome-bound Get4/5 facilitates the capture of tail-anchored proteins by Sgt2 in yeast. Nature Communications 12, 782 (2021)
MPG.PuRe
DOI
publisher-version
99.
Journal Article
Tegunov, D.; Xue, L.; Dienemann, C.; Cramer, P.; Mahamid, J.: Multi-particle cryo-EM refinement with M visualizes ribosome-antibiotic complex at 3.5 Å in cells. Nature Methods 18 (2), pp. 186 - 193 (2021)
MPG.PuRe
DOI
Web-View
Print Page
Open in new window
Estimated DIN-A4 page-width
Go to Editor View