Publications

Journal Article (12371)

1.
Journal Article
Scheiderer, L.; von der Emde, H.; Hesselink, M.; Weber, M.; Hell, S. W.: MINSTED tracking of single biomolecules. Nature Methods (2024)
2.
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Rickert, J. D.; Held, M. O.; Engelhardt, J.; Hell, S. W.: 4Pi MINFLUX arrangement maximizes spatio-temporal localization precision of fluorescence emitter. PNAS 121 (11), e2318870121 (2024)
3.
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Cramer, P.: Good reasons for structural biology. Nature Structural & Molecular Biology (2024)
4.
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Hartmann, P.; Bohdan, K.; Hommrich, M.; Juliá, F.; Vogelsang, L.; Eirich, J.; Zangl, R.; Farès, C.; Jacobs, J. B.; Mukhopadhyay, D. et al.; Mengeler, J. M.; Vetere, A.; Sterling, M. S.; Hinrichs, H.; Becker, S.; Morgner, N.; Schrader, W.; Finkemeier, I.; Dietz, K.-J.; Griesinger, C.; Ritter, T.: Chemoselective umpolung of thiols to episulfoniums for cysteine bioconjugation. Nature Chemistry 16, pp. 380 - 388 (2024)
5.
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Kaur, N.; Mithu, V. S.; Kumar, S.: A review on (eco)toxicity of ionic liquids and their interaction with phospholipid membranes. Journal of Molecular Liquids 397, 124095 (2024)
6.
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Krauter, D.; Stausberg, D.; Hartmann, T. J.; Volkmann, S.; Kungl, T.; Rasche, D. A.; Saher, G.; Fledrich, R.; Stassart, R.M.; Nave, K.-A. et al.; Göbbels, S.; Ewers, D.; Sereda, M. W.: Targeting PI3K/Akt/mTOR signaling in rodent models of PMP22 gene-dosage diseases. Embo Molecular Medicine (2024)
7.
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Zhang, Z.; Kumar, V.; Dybkov, O.; Will, C. L.; Urlaub, H.; Stark, H.; Lührmann, R.: Cryo-EM analyses of dimerized spliceosomes provide new insights into the functions of B complex proteins. The EMBO Journal (2024)
8.
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Ebert, K.E.; Belov, V. N.; John, M.; Weiss, T.; Brüning, T.; Hayen, H.; Koch, H.M.; Bury, D.: Identification, Organic Synthesis, and Sensitive Analysis of a cis-Homosalate-Specific Exposure Biomarker. Chemical Research in Toxicology 37 (2), pp. 285 - 291 (2024)
9.
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Frieg, B.; Han, M.; Giller, K.; Dienemann, C.; Riedel, D.; Becker, S.; Andreas, L. B.; Griesinger, C.; Schröder, G. F.: Cryo-EM structures of lipidic fibrils of amyloid-β (1-40). Nature Communications 15, 1297 (2024)
10.
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Phelan, J. D.; Scheich, S.; Choi, J.; Wright, G. W.; Häupl, B.; Young, R. M.; Rieke, S. A.; Pape, M.; Ji, Y.; Urlaub, H. et al.; Bolomsky, A.; Doebele, C.; Zindel, A.; Wotapek, T.; Kasbekar, M.; Collinge, B.; Huang, D. W.; Coulibaly, Z. A.; Morris, V. M.; Zhuang, X.; Enssle, J. C.; Yu, X.; Xu, W.; Yang, Y.; Zhao, H.; Wang, Z.; Tran, A. D.; Shoemaker, C. J.; Shevchenko, G.; Hodson, D. J.; Shaffer, A. L.; Staudt, L. M.; Oellerich, T.: Response to Bruton’s tyrosine kinase inhibitors in aggressive lymphomas linked to chronic selective autophagy. Cancer Cell 42 (2), pp. 238 - 252.e9 (2024)
11.
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Düring, J.; Wolter, M.; Toplak, J. J.; Torres, C.; Dybkov, O.; Fokkens, T. J.; Bohnsack, K. E.; Urlaub, H.; Steinchen, W.; Dienemann, C. et al.; Lorenz, S.: Structural mechanisms of autoinhibition and substrate recognition by the ubiquitin ligase HACE1. Nature Structural & Molecular Biology 31, pp. 364 - 377 (2024)
12.
Journal Article
Soh, W. T.; Roetschke, H. P.; Cormican, J. A.; Teo, B.F.; Chiam, N. C.; Raabe, M.; Pflanz, R.; Henneberg, F.; Becker, S.; Chari, A. et al.; Liu, H.; Urlaub, H.; Liepe, J.; Mishto, M.: Protein degradation by human 20S proteasomes elucidates the interplay between peptide hydrolysis and splicing. Nature Communications 15 (1), 1147 (2024)
13.
Journal Article
Hong, J.; Garfolo, R.; Kabre, S.; Humml, C.; Velanac, V.; Roué, C.; Beck, B.; Jeanette, H.; Haslam, S.; Bach, M. et al.; Arora, S.; Acheta, J.; Nave, K.-A.; Schwab, M. H.; Jourd'heuil, D.; Poitelon, Y.; Belin, S.: PMP2 regulates myelin thickening and ATP production during remyelination. Glia (2024)
14.
Journal Article
Hong, J.; Garfolo, R.; Kabre, S.; Humml, C.; Velanac, V.; Roue, C.; Beck, B.; Jeanette, H.; Haslam, S.; Bach, M. et al.; Arora, S.; Acheta, J.; Nave, K.-A.; Schwab, M. H.; Jourd'heuil, D.; Poitelon, Y.; Belin, S.: PMP2 regulates myelin thickening and ATP production during remyelination. Glia (2024)
15.
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Kokic, G.; Yakoub, G.; van den Heuvel, D.; Wondergem, A. P.; van der Meer, P. J.; van der Weegen, Y.; Chernev, A.; Fianu, I.; Fokkens, T. J.; Lorenz, S. et al.; Urlaub, H.; Cramer, P.; Luijsterburg, M. S.: Structural basis for RNA polymerase II ubiquitylation and inactivation in transcription-coupled repair. Nature Structural & Molecular Biology (2024)
16.
Journal Article
Knorr, G.; Bossi, M.L.; Butkevich, A.N.; Hell, S. W.: Synthesis of Thioxanthone 10,10-Dioxides and Sulfone-Fluoresceins via Pd-Catalyzed Sulfonylative Homocoupling. Organic Letters 26 (4), pp. 945 - 949 (2024)
17.
Journal Article
Burtscher, J.; Duderstadt, Y.; Gatterer, H.; Burtscher, M.; Vozdek, R.; Millet, G. P.; Hicks, A. A.; Ehrenreich, H.; Kopp, M.: Hypoxia Sensing and Responses in Parkinson’s Disease. International Journal of Molecular Sciences 25 (3), 1759 (2024)
18.
Journal Article
Carmona, A.; Carboni, E.; Gomes, L.C.; Roudeau, S.; Maass, F.; Lenz, C.; Ortega, R.; Lingor, P.: Metal dyshomeostasis in the substantia nigra of patients with Parkinson's disease or multiple sclerosis. Journal of Neurochemistry 168 (2), pp. 128 - 141 (2024)
19.
Journal Article
Cepeda, A. P.; Ninov, M.; Neef, J.; Parfentev, I.; Kusch, K.; Reisinger, E.; Jahn, R.; Moser, T.; Urlaub, H.: Proteomic Analysis Reveals the Composition of Glutamatergic Organelles of Auditory Inner Hair Cells. Molecular & Cellular Proteomics 23 (2), 100704 (2024)
20.
Journal Article
Miskowiak, K. W.; Petersen, J. Z.; Macoveanu, J.; Ysbaek-Nielsen, A. T.; Lindegaard, I. A.; Cramer, K.; Mogensen, M. B.; Hammershoj, L. G.; Stougaard, M. E.; Jorgensen, J. L. et al.; Schmidt, L. S.; Vinberg, M.; Ehrenreich, H.; Hageman, I.; Videbech, P.; Gbyl, K.; Kellner, C. H.; Kessing, L. V.; Jorgensen, M. B.: Effect of erythropoietin on cognitive side-effects of electroconvulsive therapy in depression: A randomized, double-blind, placebo-controlled trial. European Neuropsychopharmacology 79, pp. 38 - 48 (2024)
21.
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Samatova, E.; Komar, A.A.; Rodnina, M. V.: How the ribosome shapes cotranslational protein folding. Current Opinion in Structural Biology 84, 102740 (2024)
22.
Journal Article
Wegener, J. W.; Mitronova, G.; Elshareif, L.; Quentin, C.; Belov, V. N.; Pochechueva, T.; Hasenfuss, G.; Ackermann, L.; Lehnart, S. E.: A dual-targeted drug inhibits cardiac ryanodine receptor Ca2+ leak but activates SERCA2a Ca2+ uptake. Life science alliance 7 (2), e202302278 (2024)
23.
Journal Article
Zhuang, S.; Chakraborty, P.; Zweckstetter, M.: Regulation of tau by peptidyl-prolyl isomerases. Current Opinion in Structural Biology 84, 102739 (2024)
24.
Journal Article
Oberbeckmann, E.; Quililan, K.; Cramer, P.; Oudelaar, A. M.: In vitro reconstitution of chromatin domains shows a role for nucleosome positioning in 3D genome organization. Nature Genetics (2024)
25.
Journal Article
Fu, L.; Weiskopf, E.N.; Akkermans, O.; Swanson, N.A.; Cheng, S.; Schwartz, T.U.; Görlich, D.: HIV-1 capsids enter the FG phase of nuclear pores like a transport receptor. Nature (2024)
26.
Journal Article
Looser, Z.J.; Faik, Z.; Ravotto, L.; Zanker, H.S.; Jung, R. B.; Werner, H. B.; Ruhwedel, T.; Möbius, W.; Bergles, D.E.; Barros, L.F. et al.; Nave, K.-A.; Weber, B.; Saab, A.S.: Oligodendrocyte–axon metabolic coupling is mediated by extracellular K+ and maintains axonal health. Nature Neuroscience (2024)
27.
Journal Article
Clavet-Fournier, V.; Lee, C.; Wegner, W.; Brose, N.; Rhee, J. S.; Willig, K. I.: Pre- and postsynaptic nanostructures increase in size and complexity after induction of long-term potentiation. iScience 27 (1), 108679 (2024)
28.
Journal Article
Hintze, A.; Lange, F.; Steyer, A. M.; Anstatt, J.; Möbius, W.; Jakobs, S.; Wichmann, C.: Developmental changes of the mitochondria in the murine anteroventral cochlear nucleus. iScience 27 (1), 108700 (2024)
29.
Journal Article
da Silva, A. N. R.; Pereira, G. R. C.; Bonet, L. F. S.; Outeiro, T. F.; De Mesquita, J. F.: In silico analysis of alpha‐synuclein protein variants and posttranslational modifications related to Parkinson's disease. Journal of Cellular Biochemistry, in press (2024)
30.
Journal Article
Poerschke, S.; Oeljeklaus, S.; Cruz-Zaragoza, L.D.; Schenzielorz, A.; Dahal, D.; Hillen, H. S.; Das, H.; Kremer, L.S.; Valpadashi, A.; Breuer, M. et al.; Sattmann, J.; Richter-Dennerlein, R.; Warscheid, B.; Dennerlein, S.; Rehling, P.: Identification of TMEM126A as OXA1L-interacting protein reveals cotranslational quality control in mitochondria. Molecular Cell 84 (2), pp. 345 - 358.e5 (2024)
31.
Journal Article
Hajialiasgary Najafabadi, A.; Soheilifar, M. H.; Masoudi-Khoram, N.: Exosomes in skin photoaging: biological functions and therapeutic opportunity. Cell Communication and Signaling 22, 32 (2024)
32.
Journal Article
Yang, Y.; Henke, J.-W.; Raja, A.S.; Kappert, F. J.; Huang, G.; Arend, G.; Qiu, Z.; Feist, A.; Wang, R.N.; Tusnin, A. et al.; Tikan, A.; Ropers, C.; Kippenberg, T.J.: Free-electron interaction with nonlinear optical states in microresonators. Science 383 (6679), pp. 168 - 173 (2024)
33.
Journal Article
Sahoo, P.; Kollmeier, J. M.; Wenkel, N.; Badura, S.; Gaertner, J.; Frahm, J.; Dreha-Kulaczewski, S.: CSF and venous blood flow from childhood to adulthood studied by real-time phase-contrast MRI. Childs Nervous System (2024)
34.
Journal Article
van Belle, G. J.; Zieseniss, A.; Heidenreich, D.; Olmos, M.; Zhuikova, A.; Möbius, W.; Paul, M. W.; Katschinski, D. M.: Cargo-specific effects of hypoxia on clathrin-mediated trafficking. Pflügers Archiv: European Journal of Physiology (2024)
35.
Journal Article
Sieme, D.; Engelke, M.; Rezaei-Ghaleh, N.; Becker, S.; Wienands, J.; Griesinger, C.: Autoinhibition in the Signal Transducer CIN85 Modulates B Cell Activation. Journal of the American Chemical Society 146 (1), pp. 399 - 409 (2024)
36.
Journal Article
Funk, L.-M.; Poschmann, G.; Rabe von Pappenheim, F.; Chari, A.; Stegmann, K. M.; Dickmanns, A.; Wensien, M.; Eulig, N.; Paknia, E.; Heyne, G. et al.; Penka, E.; Pearson, A. R.; Berndt, C.; Fritz, T.; Bazzi, S.; Uranga, J.; Mata, R. A.; Dobbelstein, M.; Hilgenfeld, R.; Curth, U.; Tittmann, K.: Multiple redox switches of the SARS-CoV-2 main protease in vitro provide opportunities for drug design. Nature Communications 15, 411 (2024)
37.
Journal Article
Palikyras, S.; Sofiadis, K.; Stavropoulou, A.; Danieli-Mackay, A.; Varamogianni-Mamatsi, V.; Hörl, D.; Nasiscionyte, S.; Zhu, Y.; Papadionysiou, I.; Papadakis, A. et al.; Josipovic, N.; Zirkel, A.; O'Connell, A.; Loughran, G.; Keane, J.; Michel, A.; Wagner, W.; Beyer, A.; Harz, H.; Leonhardt, H.; Lukinavičius, G.; Nikolaou, C.; Papantonis, A.: Rapid and synchronous chemical induction of replicative-like senescence via a small molecule inhibitor. Aging Cell, e14083 (2024)
38.
Journal Article
Zhao, Y.; Fang, Q.; Sharma, S.; Jakhanwal, S.; Jahn, R.; Lindau, M.: All SNAP25 molecules in the vesicle–plasma membrane contact zone change conformation during vesicle priming. Proceedings of the National Academy of Sciences of the United States of America 121 (2), e2309161121 (2024)
39.
Journal Article
Quesnel, A.; Martin, L.D.; Tarzi, C.; Lenis, V.P.; Coles, N.; Islam, M.; Angione, C.; Outeiro, T. F.; Khundakar, A.A.; Filippou, P.S.: Uncovering potential diagnostic and pathophysiological roles of α-synuclein and DJ-1 in melanoma. Cancer Medicine 13 (1), e6900 (2024)
40.
Journal Article
Basu, S.; Zhao, B.; Biró, B.; Faraggi, E.; Gsponer, J.; Hu, G.; Kloczkowski, A.; Malhis, N.; Mirdita, M.; Söding, J. et al.; Steinegger, M.; Wang, D.; Wang, K.; Xu, D.; Zhang, J.; Kurgan, L.: DescribePROT in 2023: more, higher-quality and experimental annotations and improved data download options. Nucleic Acids Research 52 (D1), pp. D426 - D433 (2024)
41.
Journal Article
Chaban, A.; Minakhin, L.; Goldobina, E.; Bae, B.; Hao, Y.; Borukhov, S.; Putzeys, L.; Boon, M.; Kabinger, F.; Lavigne, R. et al.; Makarova, K.S.; Koonin, E.V.; Nair, S.K.; Tagami, S.; Severinov, K.; Sokolova, M. L.: Tail-tape-fused virion and non-virion RNA polymerases of a thermophilic virus with an extremely long tail. Nature Communications 15, 317 (2024)
42.
Journal Article
DʼEste, E.; Lukinavičius, G.; Lincoln, R.; Opazo, F.; Fornasiero, E.F.: Advancing cell biology with nanoscale fluorescence imaging: essential practical considerations. Trends in Cell Biology (2024)
43.
Journal Article
Liu, Z.; Xiao, C.; Lin, S.; Tittmann, K.; Dai, S.: Multifaceted Role of the Substrate Phosphate Group in Transketolase Catalysis. ACS Catalysis 14 (1), pp. 355 - 365 (2024)
44.
Journal Article
MacCarthy, C. M.; Wu, G.; Malik, V.; Menuchin-Lasowski, Y.; Velychko, T.; Keshet, G.; Fan, R.; Bedzhov, I.; Church, G. M.; Jauch, R. et al.; Cojocaru, V.; Schoeler, H. R.; Velychko, S.: Highly cooperative chimeric super-SOX induces naive pluripotency across species. Cell Stem Cell 31 (1), e9, pp. 127 - 147 (2024)
45.
Journal Article
Wagener, M. G.; Kornblum, M.; Kiene, F.; Ganter, M.; Teichmann, U.: Hematologic parameters in female alpacas during age progression: a retrospective study. Scientific Reports 14, 492 (2024)
46.
Journal Article
Ibáñez, M.; Dieball, C.; Lasanta, A.; Godec, A.; Rica, R. A.: Heating and cooling are fundamentally asymmetric and evolve along distinct pathways. Nature Physics (2024)
47.
Journal Article
Dopkins, N.; Singh, B.; Michael, S.; Zhang, P.; Marston, J.L.; Fei, T.; Singh, M.; Feschotte, C.; Collins, N.; Bendall, M.L. et al.; Nixon, D.F.: Ribosomal profiling of human endogenous retroviruses in healthy tissues. BMC Genomics 25 (1), 5 (2024)
48.
Journal Article
Petrov, D.; Perthold, J.W.; Oostenbrink, C.; de Groot, B. L.; Gapsys, V.: Guidelines for Free-Energy Calculations Involving Charge Changes. Journal of Chemical Theory and Computation 20 (2), pp. 914 - 925 (2024)
49.
Journal Article
Aksu, M.; Kumar, P.; Güttler, T.; Taxer, W.; Gregor, K.; Mußil, B.; Rymarenko, O.; Stegmann, K.M.; Dickmanns, A.; Gerber, S. et al.; Reineking, W.; Schulz, C.; Henneck, T.; Mohamed, A.; Pohlmann, G.; Ramazanoglu, M.; Mese, K.; Groß, U.; Ben-Yedidia, T.; Ovadia, O.; Fischer, D.W.; Kamensky, M.; Reichman, A.; Baumgärtner, W.; von Köckritz-Blickwede, M.; Dobbelstein, M.; Görlich, D.: Nanobodies to multiple spike variants and inhalation of nanobody-containing aerosols neutralize SARS-CoV-2 in cell culture and hamsters. Antiviral Research 221, 105778 (2024)
50.
Journal Article
Alfken, J.; Neuhaus, C.; Major, A.; Taskina, A.; Hoffmann, C.; Ganzella, M.; Petrovic, A.; Zwicker, D.; Fernández-Busnadiego, R.; Jahn, R. et al.; Milovanovic, D.; Salditt, T.: Vesicle condensation induced by synapsin: condensate size, geometry, and vesicle shape deformations. European Physical Journal E 47 (1), 8 (2024)
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